BLASTX nr result

ID: Cephaelis21_contig00004195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004195
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK91384.1| AT3g19760/MMB12_21 [Arabidopsis thaliana] gi|2509...    72   8e-23
ref|NP_188610.1| DEAD-box ATP-dependent RNA helicase 2 [Arabidop...    72   8e-23
gb|ADV04058.1| DEAD box RNA helicase RH2b [Hevea brasiliensis]         72   8e-23
emb|CAA09195.1| RNA helicase [Arabidopsis thaliana] gi|9294443|d...    72   8e-23
gb|ADV04057.1| DEAD box RNA helicase RH2a [Hevea brasiliensis]         72   8e-23

>gb|AAK91384.1| AT3g19760/MMB12_21 [Arabidopsis thaliana]
           gi|25090064|gb|AAN72219.1| At3g19760/MMB12_21
           [Arabidopsis thaliana]
          Length = 408

 Score = 72.4 bits (176), Expect(2) = 8e-23
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 290 FSLIGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVANLI 412
           F   GVAI+FVKSDDIKILRDIEQYYSTQIDEMPMNVA+LI
Sbjct: 368 FGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408



 Score = 60.8 bits (146), Expect(2) = 8e-23
 Identities = 39/76 (51%), Positives = 44/76 (57%)
 Frame = +1

Query: 1   KERDAIMSEFMSLQYCIMILHLILLERCAVYSLLSF*HSSLQIIVLKVSLVINYDLPNNR 180
           KERDAIM+EF S    ++I   +                   I V +VSLVINYDLPNNR
Sbjct: 311 KERDAIMNEFRSGDSRVLITTDVWARG---------------IDVQQVSLVINYDLPNNR 355

Query: 181 ELYIHRIGFSGGFVRK 228
           ELYIHRIG SG F RK
Sbjct: 356 ELYIHRIGRSGRFGRK 371


>ref|NP_188610.1| DEAD-box ATP-dependent RNA helicase 2 [Arabidopsis thaliana]
           gi|109893655|sp|Q94A52.2|RH2_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 2
           gi|332642762|gb|AEE76283.1| DEAD-box ATP-dependent RNA
           helicase 2 [Arabidopsis thaliana]
          Length = 408

 Score = 72.4 bits (176), Expect(2) = 8e-23
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 290 FSLIGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVANLI 412
           F   GVAI+FVKSDDIKILRDIEQYYSTQIDEMPMNVA+LI
Sbjct: 368 FGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408



 Score = 60.8 bits (146), Expect(2) = 8e-23
 Identities = 39/76 (51%), Positives = 44/76 (57%)
 Frame = +1

Query: 1   KERDAIMSEFMSLQYCIMILHLILLERCAVYSLLSF*HSSLQIIVLKVSLVINYDLPNNR 180
           KERDAIM+EF S    ++I   +                   I V +VSLVINYDLPNNR
Sbjct: 311 KERDAIMNEFRSGDSRVLITTDVWARG---------------IDVQQVSLVINYDLPNNR 355

Query: 181 ELYIHRIGFSGGFVRK 228
           ELYIHRIG SG F RK
Sbjct: 356 ELYIHRIGRSGRFGRK 371


>gb|ADV04058.1| DEAD box RNA helicase RH2b [Hevea brasiliensis]
          Length = 395

 Score = 72.4 bits (176), Expect(2) = 8e-23
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 290 FSLIGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVANLI 412
           F   GVAI+FVKSDDIKILRDIEQYYSTQIDEMPMNVA+LI
Sbjct: 355 FGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 395



 Score = 60.8 bits (146), Expect(2) = 8e-23
 Identities = 39/76 (51%), Positives = 44/76 (57%)
 Frame = +1

Query: 1   KERDAIMSEFMSLQYCIMILHLILLERCAVYSLLSF*HSSLQIIVLKVSLVINYDLPNNR 180
           KERDAIMSEF S    ++I   +                   + V +VSLVINYDLPNNR
Sbjct: 298 KERDAIMSEFRSGTTRVLITTDVWARG---------------LDVQQVSLVINYDLPNNR 342

Query: 181 ELYIHRIGFSGGFVRK 228
           ELYIHRIG SG F RK
Sbjct: 343 ELYIHRIGRSGRFGRK 358


>emb|CAA09195.1| RNA helicase [Arabidopsis thaliana] gi|9294443|dbj|BAB02563.1| RNA
           helicase [Arabidopsis thaliana]
          Length = 391

 Score = 72.4 bits (176), Expect(2) = 8e-23
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 290 FSLIGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVANLI 412
           F   GVAI+FVKSDDIKILRDIEQYYSTQIDEMPMNVA+LI
Sbjct: 351 FGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 391



 Score = 60.8 bits (146), Expect(2) = 8e-23
 Identities = 39/76 (51%), Positives = 44/76 (57%)
 Frame = +1

Query: 1   KERDAIMSEFMSLQYCIMILHLILLERCAVYSLLSF*HSSLQIIVLKVSLVINYDLPNNR 180
           KERDAIM+EF S    ++I   +                   I V +VSLVINYDLPNNR
Sbjct: 294 KERDAIMNEFRSGDSRVLITTDVWARG---------------IDVQQVSLVINYDLPNNR 338

Query: 181 ELYIHRIGFSGGFVRK 228
           ELYIHRIG SG F RK
Sbjct: 339 ELYIHRIGRSGRFGRK 354


>gb|ADV04057.1| DEAD box RNA helicase RH2a [Hevea brasiliensis]
          Length = 373

 Score = 72.4 bits (176), Expect(2) = 8e-23
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 290 FSLIGVAISFVKSDDIKILRDIEQYYSTQIDEMPMNVANLI 412
           F   GVAI+FVKSDDIKILRDIEQYYSTQIDEMPMNVA+LI
Sbjct: 333 FGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 373



 Score = 60.8 bits (146), Expect(2) = 8e-23
 Identities = 39/76 (51%), Positives = 44/76 (57%)
 Frame = +1

Query: 1   KERDAIMSEFMSLQYCIMILHLILLERCAVYSLLSF*HSSLQIIVLKVSLVINYDLPNNR 180
           KERDAIMSEF S    ++I   +                   + V +VSLVINYDLPNNR
Sbjct: 276 KERDAIMSEFRSGTTRVLITTDVWARG---------------LDVQQVSLVINYDLPNNR 320

Query: 181 ELYIHRIGFSGGFVRK 228
           ELYIHRIG SG F RK
Sbjct: 321 ELYIHRIGRSGRFGRK 336


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