BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004052
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   528   e-147
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   523   e-146
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   495   e-137
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   490   e-136

>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  528 bits (1359), Expect = e-147
 Identities = 257/444 (57%), Positives = 334/444 (75%), Gaps = 7/444 (1%)
 Frame = -2

Query: 1313 SLQDNSAQTPKTVRYRFSQLCREGEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREA 1134
            SL   +   P T+R R S LCR+G    A  LFDSIP+PTTVLWN+I+IG+ICNN+  +A
Sbjct: 28   SLPPKTPPKPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDA 87

Query: 1133 LALYVKMKSSHQCEPDPYTYSSVLKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLN 954
            L  Y +M++S   + D YT+SS LKACA+ + L++GK++HCH+LRS     +IVYNSLLN
Sbjct: 88   LLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLN 147

Query: 953  MYASCL------GISYWISGTDLVKNVFKTMPKRNVVAWNTMISWCLKTERPAESLYHFV 792
            MY++CL      G +Y  +  DLV+ VF TM KRNVVAWNTMISW +KTER  E+   F 
Sbjct: 148  MYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFR 207

Query: 791  MMLKMGLKPTGISFVNIFPVASAMLSVKTADALYSLVIKMGDEYINDLFIVCSAICMYAE 612
             M++MG++PT +SFVN+FP    M     A+ LY LV+K+G +Y++D F+V SAI MYAE
Sbjct: 208  TMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAE 267

Query: 611  FGCLVIARRIFDNCLERNIEVWNSMVGGYVQNFHPMEAVDLFLKALQ-DAVSIDDVTFVS 435
             GC+  AR IFD CLERN EVWN+M+GGYVQN  P+EA+DLF++ ++ +   +DDVTF+S
Sbjct: 268  LGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLS 327

Query: 434  ILTAASQLQHLDFARQLHAYLIKNSLVSHIIILNAIVSMYSKCSSISESFKVFSAMQEKD 255
             LTA SQLQ LD  RQLHAY++K+S +  ++ILNAI+ MYS+C SI  SFKVFS M E+D
Sbjct: 328  ALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERD 387

Query: 254  LVSWNTMVSALVQNGMDVEGLMLVYEMQTQGYVIDAVTITAILSAASNLRDQGIGKQTHA 75
            +V+WNTMVSA VQNG+D EGLMLV+EMQ QG+++D+VT+TA+LS ASNLR Q IGKQ HA
Sbjct: 388  VVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447

Query: 74   FMTRHKINFKGMNTYLIDMYAKSG 3
            ++ RH I F+GM+ YLIDMYAKSG
Sbjct: 448  YLIRHGIQFEGMDGYLIDMYAKSG 471



 Score =  186 bits (472), Expect = 1e-44
 Identities = 120/389 (30%), Positives = 208/389 (53%), Gaps = 5/389 (1%)
 Frame = -2

Query: 1244 GEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSV 1065
            G +  AR++FD   +  T +WN+++ GY+ NN   EA+ L+V++  S Q   D  T+ S 
Sbjct: 269  GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSA 328

Query: 1064 LKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFK 885
            L A ++ + L +G+ +H +IL+SS     ++ N+++ MY+ C  I     GT     VF 
Sbjct: 329  LTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSI-----GTSF--KVFS 381

Query: 884  TMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPVASAMLSVKT 705
             M +R+VV WNTM+S  ++     E L     M K G     ++   +  +AS + S + 
Sbjct: 382  NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEI 441

Query: 704  ADALYSLVIKMGDEYIN-DLFIVCSAICMYAEFGCLVIARRIFD--NCLERNIEVWNSMV 534
                ++ +I+ G ++   D ++    I MYA+ G +  A+++F+  +  +R+   WN+M+
Sbjct: 442  GKQAHAYLIRHGIQFEGMDGYL----IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMI 497

Query: 533  GGYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLV 354
             GY QN    E   +F K ++  V  + VT  SIL A + +  +   +Q+H + I+  L 
Sbjct: 498  AGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLN 557

Query: 353  SHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEM 174
             ++ +  A++ MYSK  +I+ +  VF+   EK+ V++ TM+ +  Q+GM    L L + M
Sbjct: 558  QNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAM 617

Query: 173  QTQGYVIDAVTITAILSAAS--NLRDQGI 93
               G   D+VT  AILSA S   L D+G+
Sbjct: 618  LGSGIKPDSVTFVAILSACSYAGLVDEGL 646



 Score =  156 bits (394), Expect = 2e-35
 Identities = 108/414 (26%), Positives = 204/414 (49%), Gaps = 6/414 (1%)
 Frame = -2

Query: 1226 RQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSVLKACAE 1047
            R++FD++ +   V WN+++  Y+      EA  ++  M       P P ++ +V  A   
Sbjct: 172  RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVWR 230

Query: 1046 TKELRMGKSVHCHILR--SSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFKTMPK 873
              +      ++  +++  S       V +S + MYA        +   D  + +F    +
Sbjct: 231  MNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAE-------LGCVDFAREIFDCCLE 283

Query: 872  RNVVAWNTMISWCLKTERPAESLYHFVMMLKMG-LKPTGISFVNIFPVASAMLSVKTADA 696
            RN   WNTMI   ++   P E++  FV +++        ++F++     S +  +     
Sbjct: 284  RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343

Query: 695  LYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIEVWNSMVGGYVQN 516
            L++ ++K     I  + I+ + I MY+  G +  + ++F N LER++  WN+MV  +VQN
Sbjct: 344  LHAYILKSST--ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 515  FHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVSHIIIL 336
                E + L  +  +    +D VT  ++L+ AS L+  +  +Q HAYLI++ +    +  
Sbjct: 402  GLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD- 460

Query: 335  NAIVSMYSKCSSISESFKVF--SAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEMQTQG 162
              ++ MY+K   I+ + ++F  ++  ++D  +WN M++   QNG+  EG  +  +M  Q 
Sbjct: 461  GYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520

Query: 161  YVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFK-GMNTYLIDMYAKSG 3
               +AVT+ +IL A + +   G+GKQ H F  R  +N    + T L+DMY+KSG
Sbjct: 521  VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSG 574


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic [Vitis vinifera]
          Length = 825

 Score =  523 bits (1348), Expect = e-146
 Identities = 254/444 (57%), Positives = 334/444 (75%), Gaps = 7/444 (1%)
 Frame = -2

Query: 1313 SLQDNSAQTPKTVRYRFSQLCREGEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREA 1134
            SL   +   P T+R R S LCR+G    A  LFDSIP+PTTVLWN+I+IG+ICNN+  +A
Sbjct: 28   SLPPKTPPKPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDA 87

Query: 1133 LALYVKMKSSHQCEPDPYTYSSVLKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLN 954
            L  Y +M++S   + D YT+SS LKACA+ + L++GK++HCH+LRS     +IVYNSLLN
Sbjct: 88   LLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLN 147

Query: 953  MYASCL------GISYWISGTDLVKNVFKTMPKRNVVAWNTMISWCLKTERPAESLYHFV 792
            MY++CL      G +Y  +  DLV+ VF TM KRNVVAWNTMISW +KTER  E+   F 
Sbjct: 148  MYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFR 207

Query: 791  MMLKMGLKPTGISFVNIFPVASAMLSVKTADALYSLVIKMGDEYINDLFIVCSAICMYAE 612
             M++MG++PT +SFVN+FP    M     A+ LY LV+K+G ++++D F+V SAI MYAE
Sbjct: 208  TMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAE 267

Query: 611  FGCLVIARRIFDNCLERNIEVWNSMVGGYVQNFHPMEAVDLFLKALQ-DAVSIDDVTFVS 435
             GC+  AR IFD CLERN EVWN+M+GGYVQN  P+EA+DLF++ ++ +   +DDVTF+S
Sbjct: 268  LGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLS 327

Query: 434  ILTAASQLQHLDFARQLHAYLIKNSLVSHIIILNAIVSMYSKCSSISESFKVFSAMQEKD 255
             LTA SQLQ L+  RQLHAY++K+S +  ++ILNAI+ MYS+C SI  SFKVFS M E+D
Sbjct: 328  ALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERD 387

Query: 254  LVSWNTMVSALVQNGMDVEGLMLVYEMQTQGYVIDAVTITAILSAASNLRDQGIGKQTHA 75
            +V+WNTMVSA VQNG+D EGLMLV+ MQ QG+++D+VT+TA+LS ASNLR Q IGKQ HA
Sbjct: 388  VVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447

Query: 74   FMTRHKINFKGMNTYLIDMYAKSG 3
            ++ RH I F+GM++YLIDMYAKSG
Sbjct: 448  YLIRHGIQFEGMDSYLIDMYAKSG 471



 Score =  189 bits (479), Expect = 2e-45
 Identities = 121/389 (31%), Positives = 209/389 (53%), Gaps = 5/389 (1%)
 Frame = -2

Query: 1244 GEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSV 1065
            G +  AR++FD   +  T +WN+++ GY+ NN   EA+ L+V++  S Q   D  T+ S 
Sbjct: 269  GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSA 328

Query: 1064 LKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFK 885
            L A ++ + L +G+ +H +IL+SS     ++ N+++ MY+ C  I     GT     VF 
Sbjct: 329  LTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSI-----GTSF--KVFS 381

Query: 884  TMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPVASAMLSVKT 705
             M +R+VV WNTM+S  ++     E L     M K G     ++   +  +AS + S + 
Sbjct: 382  NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEI 441

Query: 704  ADALYSLVIKMGDEYIN-DLFIVCSAICMYAEFGCLVIARRIFD--NCLERNIEVWNSMV 534
                ++ +I+ G ++   D ++    I MYA+ G +  A+++F+  +  +R+   WN+M+
Sbjct: 442  GKQAHAYLIRHGIQFEGMDSYL----IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMI 497

Query: 533  GGYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLV 354
             GY QN    E   +F K ++  V  + VT  SIL A + +  +   +Q+H + I+  L 
Sbjct: 498  AGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLN 557

Query: 353  SHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEM 174
             ++ +  A++ MYSK  +I+ +  VF+   EK+ V++ TM+S+  Q+GM    L L + M
Sbjct: 558  RNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAM 617

Query: 173  QTQGYVIDAVTITAILSAAS--NLRDQGI 93
               G   D+VT  AILSA S   L D+G+
Sbjct: 618  LGSGIKPDSVTFVAILSACSYAGLVDEGL 646



 Score =  155 bits (393), Expect = 2e-35
 Identities = 108/414 (26%), Positives = 205/414 (49%), Gaps = 6/414 (1%)
 Frame = -2

Query: 1226 RQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSVLKACAE 1047
            R++FD++ +   V WN+++  Y+      EA  ++  M       P P ++ +V  A   
Sbjct: 172  RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVWR 230

Query: 1046 TKELRMGKSVHCHILR--SSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFKTMPK 873
              +      ++  +++  S       V +S + MYA        +   D  + +F    +
Sbjct: 231  MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAE-------LGCVDFAREIFDCCLE 283

Query: 872  RNVVAWNTMISWCLKTERPAESLYHFVMMLKMG-LKPTGISFVNIFPVASAMLSVKTADA 696
            RN   WNTMI   ++   P E++  FV +++        ++F++     S +  ++    
Sbjct: 284  RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343

Query: 695  LYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIEVWNSMVGGYVQN 516
            L++ ++K     I  + I+ + I MY+  G +  + ++F N LER++  WN+MV  +VQN
Sbjct: 344  LHAYILKSST--ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 515  FHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVSHIIIL 336
                E + L     +    +D VT  ++L+ AS L+  +  +Q HAYLI++ +    +  
Sbjct: 402  GLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD- 460

Query: 335  NAIVSMYSKCSSISESFKVF--SAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEMQTQG 162
            + ++ MY+K   I+ + ++F  ++  ++D  +WN M++   QNG+  EG  +  +M  Q 
Sbjct: 461  SYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520

Query: 161  YVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFK-GMNTYLIDMYAKSG 3
               +AVT+ +IL A + +   G+GKQ H F  R  +N    + T L+DMY+KSG
Sbjct: 521  VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSG 574


>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
            predicted protein [Populus trichocarpa]
          Length = 465

 Score =  496 bits (1277), Expect = e-138
 Identities = 256/473 (54%), Positives = 347/473 (73%), Gaps = 7/473 (1%)
 Frame = -2

Query: 1433 TFSTGTVTPYNCPSSPPNANPHPQRGQLNQRRFSSDFGKYSLQDNSAQTPKTVRYRFSQL 1254
            T S+    P + PS  P+          N+ + +S F        S +TP ++R R S+L
Sbjct: 4    TSSSSLPIPLSTPSHDPS----------NKTQKTSLFRISPPPSPSLKTP-SIRSRLSKL 52

Query: 1253 CREGEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQ-CEPDPYT 1077
            C+EG+   A QLFD+ P+PTTV+ N+I+IG+ICNNL  EA+  Y K+KSS    + D YT
Sbjct: 53   CQEGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSSLGTKFDSYT 112

Query: 1076 YSSVLKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLG----ISYW-ISG 912
            YSS LKACAET+ L++G+++HCH++R    P +IVYNSLLNMY+SCL     +SY   S 
Sbjct: 113  YSSTLKACAETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCLSYLDYSK 172

Query: 911  TDLVKNVFKTMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPV 732
             DLV  VF TM KR+VVAWNTM+SW +KTER  E++  F +++KMG+KP+ +SFVN+FP 
Sbjct: 173  YDLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMGIKPSPVSFVNVFPA 232

Query: 731  ASAMLSVKTADALYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIE 552
             S++   K A+ALY +++KMG EY+NDLF+V SAI M+AE G +  AR++FD+CLE+N E
Sbjct: 233  FSSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIFMFAELGHIDFARKVFDHCLEKNTE 292

Query: 551  VWNSMVGGYVQNFHPMEAVDLFLKALQ-DAVSIDDVTFVSILTAASQLQHLDFARQLHAY 375
            +WN+M+GGYVQN   +E +DLFLKA++ +   +DDVTF+S+LTA SQLQ LD A+Q HA+
Sbjct: 293  IWNTMIGGYVQNNLLIEGIDLFLKAVETEQTVLDDVTFLSVLTAVSQLQCLDLAQQQHAF 352

Query: 374  LIKNSLVSHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEG 195
            +IKN  V  ++I NAI+ MYS+C+S+  SF+VF  M E+D+VSWNTM+SA VQNGMD EG
Sbjct: 353  VIKNLAVFPVMITNAIIVMYSRCNSVHTSFEVFEKMVERDVVSWNTMISAFVQNGMDDEG 412

Query: 194  LMLVYEMQTQGYVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFKGMN 36
            LMLVYEMQ QG+ ID+VT+TA+LSAASNLR Q IGKQT+A++ RH I F+GM+
Sbjct: 413  LMLVYEMQKQGFAIDSVTVTALLSAASNLRSQEIGKQTYAYLLRHGIQFEGMD 465



 Score =  112 bits (280), Expect = 3e-22
 Identities = 80/311 (25%), Positives = 156/311 (50%), Gaps = 16/311 (5%)
 Frame = -2

Query: 893 VFKTMPKRNVVAWNTMISWCLKTERPAESL--YHFVMMLKMGLKPTGISFVNIFPVASAM 720
           +F T P+   V  NT+I   +    P E++  Y  +    +G K    ++ +     +  
Sbjct: 64  LFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSSLGTKFDSYTYSSTLKACAET 123

Query: 719 LSVKTADALYSLVIKMGDE----YINDLFIVCSAI-----CM-YAEFGCLVIARRIFDNC 570
            S+K   A++  +I+          N L  + S+      C+ Y ++    +  ++FD  
Sbjct: 124 RSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCLSYLDYSKYDLVHKVFDTM 183

Query: 569 LERNIEVWNSMVGGYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFAR 390
            +R++  WN+MV  YV+    +EA+ LF   ++  +    V+FV++  A S ++    A 
Sbjct: 184 RKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMGIKPSPVSFVNVFPAFSSVEDFKNAN 243

Query: 389 QLHAYLIK--NSLVSHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQ 216
            L+  L+K  +  V+ + ++++ + M+++   I  + KVF    EK+   WNTM+   VQ
Sbjct: 244 ALYGMLVKMGSEYVNDLFVVSSAIFMFAELGHIDFARKVFDHCLEKNTEIWNTMIGGYVQ 303

Query: 215 NGMDVEGLMLVYE-MQTQGYVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFKGM 39
           N + +EG+ L  + ++T+  V+D VT  ++L+A S L+   + +Q HAF+ ++   F  M
Sbjct: 304 NNLLIEGIDLFLKAVETEQTVLDDVTFLSVLTAVSQLQCLDLAQQQHAFVIKNLAVFPVM 363

Query: 38  NT-YLIDMYAK 9
            T  +I MY++
Sbjct: 364 ITNAIIVMYSR 374


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
            chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  495 bits (1275), Expect = e-137
 Identities = 237/434 (54%), Positives = 332/434 (76%), Gaps = 8/434 (1%)
 Frame = -2

Query: 1280 TVRYRFSQLCREGEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSH 1101
            T+RYR S+LC+EG++  ARQLFD++P+P+TVLWN+I+IG +CNN   EAL  Y  MKSS 
Sbjct: 30   TIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSS 89

Query: 1100 -QCEPDPYTYSSVLKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLGIS- 927
             Q + D YTYSSVLKACA+T+ L +GK+VH H LR  + P +IVYNSLLNMY+ C   + 
Sbjct: 90   PQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTP 149

Query: 926  --YWISG---TDLVKNVFKTMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPT 762
                +SG    DLV+ VF TM KR VVAWNT+I+W ++TER AE++  F MM+K+G+KP+
Sbjct: 150  DGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPS 209

Query: 761  GISFVNIFPVASAMLSVKTADALYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRI 582
             +SFVN+FP  S++   K A+ ++ +++K+G EY+NDL++V SAI MYAE GCL  A+++
Sbjct: 210  PVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKV 269

Query: 581  FDNCLERNIEVWNSMVGGYVQNFHPMEAVDLFLKALQ-DAVSIDDVTFVSILTAASQLQH 405
            FDNCLERN EVWN+M+  +VQN   +E + LF +A++ +  +ID+VT +S ++AAS LQ 
Sbjct: 270  FDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQK 329

Query: 404  LDFARQLHAYLIKNSLVSHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSA 225
             + A QLHA++IKN  V+ + ++NA+++MYS+C+SI  SFK+F  M EKD+VSWNTM+SA
Sbjct: 330  FELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISA 389

Query: 224  LVQNGMDVEGLMLVYEMQTQGYVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFK 45
             VQNG++ E LML YEM+ Q  ++D+VT+TA+LSAAS+LR+  IGKQTH ++ R+ I F+
Sbjct: 390  FVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE 449

Query: 44   GMNTYLIDMYAKSG 3
            GM++YLIDMYAKSG
Sbjct: 450  GMDSYLIDMYAKSG 463



 Score =  186 bits (471), Expect = 2e-44
 Identities = 113/389 (29%), Positives = 201/389 (51%), Gaps = 5/389 (1%)
 Frame = -2

Query: 1244 GEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSV 1065
            G ++ A+++FD+  +  T +WN+++  ++ NN   E + L+ +   S     D  T  S 
Sbjct: 261  GCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSA 320

Query: 1064 LKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFK 885
            + A +  ++  + + +H  ++++       V N+L+ MY+ C  I       D    +F 
Sbjct: 321  ISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSI-------DTSFKIFD 373

Query: 884  TMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPVASAMLSVKT 705
             MP+++VV+WNTMIS  ++     E+L  F  M K  L    ++   +   AS + +   
Sbjct: 374  NMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDI 433

Query: 704  ADALYSLVIKMGDEYIN-DLFIVCSAICMYAEFGCLVIARRIFDNCL--ERNIEVWNSMV 534
                +  +++ G ++   D ++    I MYA+ G +  A+ +F+     ER+   WNSM+
Sbjct: 434  GKQTHGYLLRNGIQFEGMDSYL----IDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 489

Query: 533  GGYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLV 354
             GY QN    +A  +  + L   V  + VT  SIL A +   ++D+ +QLH + I+N L 
Sbjct: 490  SGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLD 549

Query: 353  SHIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEM 174
             ++ +  A++ MYSK  SI+ +  VFS   EK +V+++TM+    Q+GM    L + + M
Sbjct: 550  QNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRM 609

Query: 173  QTQGYVIDAVTITAILSAAS--NLRDQGI 93
            Q  G   DAVT+ A+LSA S   L D+G+
Sbjct: 610  QKSGIQPDAVTLVAVLSACSYAGLVDEGL 638



 Score =  163 bits (413), Expect = 1e-37
 Identities = 113/414 (27%), Positives = 210/414 (50%), Gaps = 6/414 (1%)
 Frame = -2

Query: 1226 RQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSVLKACAE 1047
            R++FD++ + T V WN+++  Y+    + EA+  +  M      +P P ++ +V  A + 
Sbjct: 164  RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQF-SMMMKIGIKPSPVSFVNVFPAFSS 222

Query: 1046 TKELRMGKSVHCHILR--SSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFKTMPK 873
              + +    VH  +++  S       V +S + MYA        +   +  K VF    +
Sbjct: 223  LGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAE-------LGCLEFAKKVFDNCLE 275

Query: 872  RNVVAWNTMISWCLKTERPAESLYHFVMMLKM-GLKPTGISFVNIFPVASAMLSVKTADA 696
            RN   WNTMIS  ++     E +  F   ++        ++ ++    AS +   + A+ 
Sbjct: 276  RNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQ 335

Query: 695  LYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIEVWNSMVGGYVQN 516
            L++ VIK  +  +  + ++ + I MY+    +  + +IFDN  E+++  WN+M+  +VQN
Sbjct: 336  LHAFVIK--NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQN 393

Query: 515  FHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVSHIIIL 336
                EA+ LF +  +  + +D VT  ++L+AAS L++ D  +Q H YL++N +    +  
Sbjct: 394  GLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD- 452

Query: 335  NAIVSMYSKCSSISESFKVF--SAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEMQTQG 162
            + ++ MY+K   I  +  VF  S   E+D  +WN+M+S   QNG+  +  +++ +M  Q 
Sbjct: 453  SYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQK 512

Query: 161  YVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFKG-MNTYLIDMYAKSG 3
             + + VT+ +IL A +       GKQ H F  R+ ++    + T LIDMY+KSG
Sbjct: 513  VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSG 566


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329184|gb|EFH59603.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 824

 Score =  490 bits (1262), Expect = e-136
 Identities = 251/471 (53%), Positives = 342/471 (72%), Gaps = 6/471 (1%)
 Frame = -2

Query: 1397 PSSPPNANPHPQRGQLNQRRFSSDFGKYSLQDNSAQTPKTVRYRFSQLCREGEIQTARQL 1218
            P  PP +   P +   NQ R SS F   +L   + QTP ++R R S++C+EG  Q ARQL
Sbjct: 9    PPPPPLSLQSPSQ---NQTRHSSTFSPPTL---TPQTP-SIRSRLSKICQEGNPQLARQL 61

Query: 1217 FDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQ-CEPDPYTYSSVLKACAETK 1041
            FD+IP+PTTVLWN+I+IG+ICNNL  EAL  Y +MK +    + D YTYSS LKACAETK
Sbjct: 62   FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETK 121

Query: 1040 ELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCL---GISYWISGTDLVKNVFKTMPKR 870
             L+ GK+VHCH++R      ++V+NSL+NMY SCL   G        D+V+ VF  M ++
Sbjct: 122  NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRK 181

Query: 869  NVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPVASAMLSVKTADALY 690
            NVVAWNT+ISW +KT R AE+   F +M++M +KP+ +SFVN+FP  +   S+K A+  Y
Sbjct: 182  NVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFY 241

Query: 689  SLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIEVWNSMVGGYVQNFH 510
             L++K+GDEY+ DLF+V SAI MYAE G L  +RR+FD+C+ERNIEVWN+M+G YVQN  
Sbjct: 242  GLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDC 301

Query: 509  PMEAVDLFLKAL--QDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVSHIIIL 336
             +E+++LFL+A+  ++ VS D+VTF+   +A S LQ ++  RQ H ++ KN     I+I+
Sbjct: 302  LVESIELFLEAIGSKEIVS-DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVII 360

Query: 335  NAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEMQTQGYV 156
            N+++ MYS+C  + +SF VF +M+E+D+VSWNTM+SA VQNG+D EGLMLVYEMQ QG+ 
Sbjct: 361  NSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 420

Query: 155  IDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFKGMNTYLIDMYAKSG 3
            ID +T+TA+LSAASNLR++ IGKQTH F+ R  I F+GMN+YLIDMYAKSG
Sbjct: 421  IDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSG 471



 Score =  177 bits (449), Expect = 7e-42
 Identities = 112/388 (28%), Positives = 202/388 (52%), Gaps = 4/388 (1%)
 Frame = -2

Query: 1244 GEIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSV 1065
            G+++++R++FDS  +    +WN+++  Y+ N+   E++ L+++   S +   D  T+   
Sbjct: 269  GDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLA 328

Query: 1064 LKACAETKELRMGKSVHCHILRSSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVFK 885
              A +  +++ +G+  H  + ++      ++ NSL+ MY+ C  +            VF 
Sbjct: 329  ASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFG-------VFH 381

Query: 884  TMPKRNVVAWNTMISWCLKTERPAESLYHFVMMLKMGLKPTGISFVNIFPVASAMLSVKT 705
            +M +R+VV+WNTMIS  ++     E L     M K G K   I+   +   AS + + + 
Sbjct: 382  SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 441

Query: 704  ADALYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNC--LERNIEVWNSMVG 531
                +  +I+ G ++     +    I MYA+ G + I++++F+     ER+   WNSM+ 
Sbjct: 442  GKQTHGFLIRQGIQFEG---MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMIS 498

Query: 530  GYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVS 351
            GY QN H  E   +F K L+  +  + VT  SIL A SQ+  +D  +QLH + I+  L  
Sbjct: 499  GYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQ 558

Query: 350  HIIILNAIVSMYSKCSSISESFKVFSAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYEMQ 171
            ++ + +A+V MYSK  +I  +  +FS  +E++ V++ TM+    Q+GM    + L   MQ
Sbjct: 559  NVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 618

Query: 170  TQGYVIDAVTITAILSAA--SNLRDQGI 93
              G   DA+   A+LSA   S L D+G+
Sbjct: 619  ELGIKPDAIAFVAVLSACSYSGLVDEGL 646



 Score =  150 bits (380), Expect = 7e-34
 Identities = 107/419 (25%), Positives = 204/419 (48%), Gaps = 6/419 (1%)
 Frame = -2

Query: 1241 EIQTARQLFDSIPQPTTVLWNSILIGYICNNLHREALALYVKMKSSHQCEPDPYTYSSVL 1062
            E    R++FD++ +   V WN+++  Y+    + EA   +  M    + +P P ++ +V 
Sbjct: 167  EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRM-EIKPSPVSFVNVF 225

Query: 1061 KACAETKELRMGKSVHCHILR--SSIYPGKIVYNSLLNMYASCLGISYWISGTDLVKNVF 888
             A A ++ ++     +  +L+          V +S ++MYA        +   +  + VF
Sbjct: 226  PAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE-------LGDLESSRRVF 278

Query: 887  KTMPKRNVVAWNTMISWCLKTERPAESLYHFVMML-KMGLKPTGISFVNIFPVASAMLSV 711
             +  +RN+  WNTMI   ++ +   ES+  F+  +    +    ++F+      S +  V
Sbjct: 279  DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQV 338

Query: 710  KTADALYSLVIKMGDEYINDLFIVCSAICMYAEFGCLVIARRIFDNCLERNIEVWNSMVG 531
            +     +  V K   E    + I+ S + MY+  G +  +  +F +  ER++  WN+M+ 
Sbjct: 339  ELGRQFHGFVSKNFREL--PIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMIS 396

Query: 530  GYVQNFHPMEAVDLFLKALQDAVSIDDVTFVSILTAASQLQHLDFARQLHAYLIKNSLVS 351
             +VQN    E + L  +  +    ID +T  ++L+AAS L++ +  +Q H +LI+   + 
Sbjct: 397  AFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQG-IQ 455

Query: 350  HIIILNAIVSMYSKCSSISESFKVF--SAMQEKDLVSWNTMVSALVQNGMDVEGLMLVYE 177
               + + ++ MY+K   I  S K+F  S   E+D  +WN+M+S   QNG   E  ++  +
Sbjct: 456  FEGMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRK 515

Query: 176  MQTQGYVIDAVTITAILSAASNLRDQGIGKQTHAFMTRHKINFK-GMNTYLIDMYAKSG 3
            M  Q    +AVT+ +IL A S +    +GKQ H F  R  ++    + + L+DMY+K+G
Sbjct: 516  MLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 574