BLASTX nr result

ID: Cephaelis21_contig00004008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00004008
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36285.1| unknown [Medicago truncatula]                          102   2e-19
ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ...   102   2e-19
ref|XP_002864516.1| hypothetical protein ARALYDRAFT_495837 [Arab...    97   5e-18
ref|XP_002531029.1| U4/U6.U5 tri-snRNP-associated protein, putat...    97   8e-18
ref|XP_004146322.1| PREDICTED: uncharacterized protein LOC101220...    96   1e-17

>gb|AFK36285.1| unknown [Medicago truncatula]
          Length = 186

 Score =  102 bits (253), Expect = 2e-19
 Identities = 56/91 (61%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = +3

Query: 432 VDATSKEKQK-KLKESGVEVEKGNXXXXXXXXXXXXXXKKLGIPVGFDSTKGKPVAGNDV 608
           VD  +KE+Q+ K KE+G EV+                 K +GIPVGFDSTKGKPV G DV
Sbjct: 104 VDGIAKEQQQQKQKENGEEVDVNEDEIEMM--------KMMGIPVGFDSTKGKPVPGADV 155

Query: 609 GAVRKVTKRQPRQYMNRRGGFNRPLPAELNR 701
             VR VTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 156 SGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small
           nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula]
          Length = 186

 Score =  102 bits (253), Expect = 2e-19
 Identities = 56/91 (61%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = +3

Query: 432 VDATSKEKQK-KLKESGVEVEKGNXXXXXXXXXXXXXXKKLGIPVGFDSTKGKPVAGNDV 608
           VD  +KE+Q+ K KE+G EV+                 K +GIPVGFDSTKGKPV G DV
Sbjct: 104 VDGIAKEQQQQKQKENGEEVDVNEDEIEMM--------KMMGIPVGFDSTKGKPVPGADV 155

Query: 609 GAVRKVTKRQPRQYMNRRGGFNRPLPAELNR 701
             VR VTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 156 SGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_002864516.1| hypothetical protein ARALYDRAFT_495837 [Arabidopsis lyrata subsp.
           lyrata] gi|297310351|gb|EFH40775.1| hypothetical protein
           ARALYDRAFT_495837 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 50/87 (57%), Positives = 57/87 (65%)
 Frame = +3

Query: 441 TSKEKQKKLKESGVEVEKGNXXXXXXXXXXXXXXKKLGIPVGFDSTKGKPVAGNDVGAVR 620
           T+K+K K+  ++  +   G               K LGIP GFDSTKGKPVAG DV  +R
Sbjct: 135 TTKKKDKQPSDAAAD-NGGGEAEEGMDVNEVEMMKMLGIPTGFDSTKGKPVAGADVSGIR 193

Query: 621 KVTKRQPRQYMNRRGGFNRPLPAELNR 701
            VTKRQPRQYMNRRGGFNRPLPAE NR
Sbjct: 194 AVTKRQPRQYMNRRGGFNRPLPAERNR 220


>ref|XP_002531029.1| U4/U6.U5 tri-snRNP-associated protein, putative [Ricinus communis]
           gi|223529382|gb|EEF31346.1| U4/U6.U5
           tri-snRNP-associated protein, putative [Ricinus
           communis]
          Length = 213

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 46/53 (86%), Positives = 46/53 (86%)
 Frame = +3

Query: 543 KKLGIPVGFDSTKGKPVAGNDVGAVRKVTKRQPRQYMNRRGGFNRPLPAELNR 701
           KKLGIPVGFDSTKGKPV G DV  VR VTKRQPRQYMNRRGGFNRPLP E NR
Sbjct: 161 KKLGIPVGFDSTKGKPVPGADVSGVRPVTKRQPRQYMNRRGGFNRPLPPERNR 213


>ref|XP_004146322.1| PREDICTED: uncharacterized protein LOC101220695 isoform 1 [Cucumis
           sativus] gi|449457173|ref|XP_004146323.1| PREDICTED:
           uncharacterized protein LOC101220695 isoform 2 [Cucumis
           sativus] gi|449502931|ref|XP_004161783.1| PREDICTED:
           uncharacterized LOC101220695 isoform 1 [Cucumis sativus]
           gi|449502935|ref|XP_004161784.1| PREDICTED:
           uncharacterized LOC101220695 isoform 2 [Cucumis sativus]
          Length = 232

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 46/53 (86%), Positives = 47/53 (88%)
 Frame = +3

Query: 543 KKLGIPVGFDSTKGKPVAGNDVGAVRKVTKRQPRQYMNRRGGFNRPLPAELNR 701
           KKLGIPVGFDSTKGKPV G DV  VR VTKRQPRQYMNRRGGFNRPLPAE +R
Sbjct: 180 KKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232


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