BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003974
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM15415.1| hypothetical protein [Arabidopsis thaliana]             53   9e-07
ref|NP_085546.2| cytochrome c biogenesis orf256 [Arabidopsis tha...    53   9e-07
ref|YP_004927499.1| ccmC (mitochondrion) [Brassica oleracea] gi|...    53   1e-06
ref|YP_006666003.1| cytochrome c biogenesis protein ccmC (mitoch...    53   1e-06
ref|YP_173360.1| cytochrome c maturation protein CcmC [Nicotiana...    54   2e-06

>gb|AAM15415.1| hypothetical protein [Arabidopsis thaliana]
          Length = 256

 Score = 53.1 bits (126), Expect(2) = 9e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 533 PFSTRILFVLETRLPIPSFLESPLTDGRRSR 625
           PFSTRILFVLETRLPIPSFLESP+T+   +R
Sbjct: 203 PFSTRILFVLETRLPIPSFLESPITEEIEAR 233



 Score = 26.2 bits (56), Expect(2) = 9e-07
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 615 EDREGIPKPSSLSTRSPM 668
           E REGIPKPSSL+  + M
Sbjct: 231 EAREGIPKPSSLALFASM 248


>ref|NP_085546.2| cytochrome c biogenesis orf256 [Arabidopsis thaliana]
           gi|42570723|ref|NP_973435.1| putative cytochrome c
           biosynthesis ccmC-like mitochondrial protein
           [Arabidopsis thaliana] gi|15215916|emb|CAA69832.3|
           cytochrome c biogenesis orf256 [Arabidopsis thaliana]
           gi|20198295|gb|AAM15509.1| hypothetical protein
           [Arabidopsis thaliana] gi|48310003|gb|AAT41735.1|
           At2g07681 [Arabidopsis thaliana]
           gi|50198828|gb|AAT70446.1| At2g07771 [Arabidopsis
           thaliana] gi|330250964|gb|AEC06058.1| putative
           cytochrome c biosynthesis ccmC-like mitochondrial
           protein [Arabidopsis thaliana]
           gi|339773240|gb|AEK01264.1| ccmC [Arabidopsis thaliana]
           gi|339773274|gb|AEK01297.1| ccmC [Arabidopsis thaliana]
           gi|339773299|gb|AEK01321.1| ccmC [Arabidopsis thaliana]
          Length = 256

 Score = 53.1 bits (126), Expect(2) = 9e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 533 PFSTRILFVLETRLPIPSFLESPLTDGRRSR 625
           PFSTRILFVLETRLPIPSFLESP+T+   +R
Sbjct: 203 PFSTRILFVLETRLPIPSFLESPITEEIEAR 233



 Score = 26.2 bits (56), Expect(2) = 9e-07
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 615 EDREGIPKPSSLSTRSPM 668
           E REGIPKPSSL+  + M
Sbjct: 231 EAREGIPKPSSLALFASM 248


>ref|YP_004927499.1| ccmC (mitochondrion) [Brassica oleracea]
           gi|353526652|ref|YP_004927817.1| ccmC (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531335|ref|YP_004927720.1| ccmC (mitochondrion)
           [Brassica juncea] gi|335354840|gb|AEH43396.1| ccmC
           [Brassica rapa subsp. campestris]
           gi|335354972|gb|AEH43527.1| ccmC [Brassica oleracea]
           gi|335355068|gb|AEH43621.1| ccmC [Brassica juncea]
           gi|339511263|emb|CBX48318.1| ccmC [Brassica napus]
          Length = 247

 Score = 53.1 bits (126), Expect(2) = 1e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 533 PFSTRILFVLETRLPIPSFLESPLTDGRRSR 625
           PFSTRILFVLETRLPIPSFLESP+T+   +R
Sbjct: 203 PFSTRILFVLETRLPIPSFLESPITEEIEAR 233



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 615 EDREGIPKPSSLS 653
           E REGIPKPSSL+
Sbjct: 231 EAREGIPKPSSLA 243


>ref|YP_006666003.1| cytochrome c biogenesis protein ccmC (mitochondrion) [Raphanus
           sativus] gi|223005784|dbj|BAH22354.1| cytochrome c
           maturation [Raphanus sativus]
           gi|400278293|dbj|BAM36217.1| cytochrome c biogenesis
           protein ccmC (mitochondrion) [Raphanus sativus]
           gi|400278323|dbj|BAM36246.1| cytochrome c biogenesis
           protein ccmC (mitochondrion) [Raphanus sativus]
          Length = 247

 Score = 53.1 bits (126), Expect(2) = 1e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 533 PFSTRILFVLETRLPIPSFLESPLTDGRRSR 625
           PFSTRILFVLETRLPIPSFLESP+T+   +R
Sbjct: 203 PFSTRILFVLETRLPIPSFLESPITEEIEAR 233



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 615 EDREGIPKPSSLS 653
           E REGIPKPSSL+
Sbjct: 231 EAREGIPKPSSLA 243


>ref|YP_173360.1| cytochrome c maturation protein CcmC [Nicotiana tabacum]
          Length = 250

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 530 APFSTRILFVLETRLPIPSFLESPLTDGRRSR 625
           +PFSTRILFVLETRLPIPSFLESPLT+   +R
Sbjct: 202 SPFSTRILFVLETRLPIPSFLESPLTEEIEAR 233



 Score = 23.5 bits (49), Expect(2) = 2e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 615 EDREGIPKPSSLS 653
           E REGIPKP SL+
Sbjct: 231 EAREGIPKPISLA 243