BLASTX nr result

ID: Cephaelis21_contig00003761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003761
         (2037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...   106   3e-20
ref|XP_002510776.1| RNA-binding region-containing protein, putat...   103   1e-19
ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|2...    99   6e-18
ref|XP_004173374.1| PREDICTED: RNA-binding protein 38-like [Cucu...    97   1e-17
ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi...    94   1e-16

>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
            gi|297734754|emb|CBI16988.3| unnamed protein product
            [Vitis vinifera]
          Length = 264

 Score =  106 bits (264), Expect = 3e-20
 Identities = 67/118 (56%), Positives = 70/118 (59%)
 Frame = -3

Query: 1975 SYYSVYGGTTAQYPIYGTTVTGAAGGMSMITATGAAAAFYPYLNFGEXXXXXXXXXXXXX 1796
            SYYSVYGG  AQYP+YG       GGM     TGA AAFYPYL FGE             
Sbjct: 163  SYYSVYGGAAAQYPVYG----AGPGGM----MTGAGAAFYPYLQFGE-GSGGAAASGGYT 213

Query: 1795 XXXXXGIQYPHHHFLQYSAANFNSAGAYAQHYGGTTTPMSLAPTTPPLQSVCFAVPQA 1622
                 G+QYP HH +QYSA   NS G Y QHYG    PMSLAP TP LQSVCFAVPQA
Sbjct: 214  SGQGYGVQYP-HHLVQYSA--INSTGGYPQHYG---APMSLAP-TPALQSVCFAVPQA 264


>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
            gi|223551477|gb|EEF52963.1| RNA-binding region-containing
            protein, putative [Ricinus communis]
          Length = 259

 Score =  103 bits (258), Expect = 1e-19
 Identities = 66/118 (55%), Positives = 72/118 (61%)
 Frame = -3

Query: 1975 SYYSVYGGTTAQYPIYGTTVTGAAGGMSMITATGAAAAFYPYLNFGEXXXXXXXXXXXXX 1796
            SYY+VYGG TAQYP+YG   TG +G MS     GAAAAFYPYL FGE             
Sbjct: 161  SYYNVYGGATAQYPMYG---TGHSGMMS-----GAAAAFYPYLQFGE----GSGGATSYS 208

Query: 1795 XXXXXGIQYPHHHFLQYSAANFNSAGAYAQHYGGTTTPMSLAPTTPPLQSVCFAVPQA 1622
                  +QYPHH F QYSA   NS G Y QH+G    P+SLAPT   LQSVCFAVPQA
Sbjct: 209  SSQNYNVQYPHHLF-QYSAV--NSTGGYPQHFG---APLSLAPTA-SLQSVCFAVPQA 259


>ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|222858241|gb|EEE95788.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score = 98.6 bits (244), Expect = 6e-18
 Identities = 63/118 (53%), Positives = 71/118 (60%)
 Frame = -3

Query: 1975 SYYSVYGGTTAQYPIYGTTVTGAAGGMSMITATGAAAAFYPYLNFGEXXXXXXXXXXXXX 1796
            SYY++YGG TAQYP+YG+      GGM      GAAAAFYPYL FGE             
Sbjct: 164  SYYNMYGGATAQYPMYGS----GHGGM----MNGAAAAFYPYLQFGE-GSTGGATSYSNT 214

Query: 1795 XXXXXGIQYPHHHFLQYSAANFNSAGAYAQHYGGTTTPMSLAPTTPPLQSVCFAVPQA 1622
                 G+QYPHH F QYS+ N ++ G Y QHYG    PMSLAPT   L SVCFAVPQA
Sbjct: 215  SGQSYGVQYPHHLF-QYSSIN-STTGGYPQHYG---APMSLAPTA-ALPSVCFAVPQA 266


>ref|XP_004173374.1| PREDICTED: RNA-binding protein 38-like [Cucumis sativus]
          Length = 272

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 61/119 (51%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1975 SYYSVYGGTTAQYPIYGTTVTGAAGGMSMITATGAAAAFYPYLNFGEXXXXXXXXXXXXX 1796
            SYY+VYGG TAQYP+YGT   G   G     A  AAAAFYPY  FGE             
Sbjct: 168  SYYNVYGGATAQYPMYGTGPGGILSG-----AAAAAAAFYPYFQFGE------GSGGGGS 216

Query: 1795 XXXXXGIQYPHHHFLQYSAA-NFNSAGAYAQHYGGTTTPMSLAPTTPPLQSVCFAVPQA 1622
                 G+QYPHH F QYSAA N  +A  + QHY     PMSL PT P L SV FA+PQA
Sbjct: 217  GQQGYGVQYPHHLF-QYSAAINSTAATTFPQHY--AAPPMSLPPTPPTLPSVFFAIPQA 272


>ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi|355506702|gb|AES87844.1|
            RNA-binding protein [Medicago truncatula]
          Length = 267

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 60/118 (50%), Positives = 68/118 (57%)
 Frame = -3

Query: 1975 SYYSVYGGTTAQYPIYGTTVTGAAGGMSMITATGAAAAFYPYLNFGEXXXXXXXXXXXXX 1796
            SYY +YGG TAQYP+YG    G AGG  M+T   AAAA+YPYL +GE             
Sbjct: 163  SYYGMYGGATAQYPVYG---NGPAGG--MMTGGAAAAAYYPYLQYGE--GTGGATTGGYT 215

Query: 1795 XXXXXGIQYPHHHFLQYSAANFNSAGAYAQHYGGTTTPMSLAPTTPPLQSVCFAVPQA 1622
                 G+ YP   F QYS     S G YAQHYG   TP+SLAP+   L SVCFAVPQA
Sbjct: 216  SGQGYGVNYPPQVF-QYSP--IASTGGYAQHYG---TPISLAPSPAALPSVCFAVPQA 267


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