BLASTX nr result

ID: Cephaelis21_contig00003760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003760
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   297   3e-78
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   294   2e-77
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   292   8e-77
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   291   2e-76
dbj|BAJ34166.1| unnamed protein product [Thellungiella halophila]     290   4e-76

>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  297 bits (760), Expect = 3e-78
 Identities = 157/234 (67%), Positives = 173/234 (73%), Gaps = 2/234 (0%)
 Frame = +1

Query: 67  AAKQKK--VSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVLPTHXXXXXXXXXXXXX 240
           AAKQ+K  VSRNP+L+RG+GK+SRSKMYHKRGLWAIKAKNGGV P H             
Sbjct: 3   AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKP 62

Query: 241 XXVKFYPADDVKKPLANKRKPRPTKLRASITPGTVLIILTGRFKGKRVVFLRQLASGLLL 420
              KFYPADDVKKPL NKRKP+PTKLRASITPGTVLIIL GRFKGKRVVFL+QL+SGLLL
Sbjct: 63  P--KFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLL 120

Query: 421 VTGPFKINGVPLRRVNQAYVIATSTKIDISGVSFDKFDDKYFAKQVXXXXXXXXXXXXXX 600
           VTGPFK+NGVPLRRVNQAYVIATSTK+DISGV+ +KFDDKYF K+               
Sbjct: 121 VTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEA 180

Query: 601 XXXXXXVLPXXXXXXXXXXXXXLFKAIEGVADLKSYLGARFSLKSGDKPHELVF 762
                 VLP             L KAIEGV +LK+YLGARFSLK+G KPHELVF
Sbjct: 181 EKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  294 bits (753), Expect = 2e-77
 Identities = 153/233 (65%), Positives = 171/233 (73%)
 Frame = +1

Query: 64  MAAKQKKVSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVLPTHXXXXXXXXXXXXXX 243
           MA K  ++SRNP+L+RG+GK+SRS+MYHKRGLWAIKAKNGGV P H              
Sbjct: 1   MAPKTPRISRNPNLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPASPAEKPP 60

Query: 244 XVKFYPADDVKKPLANKRKPRPTKLRASITPGTVLIILTGRFKGKRVVFLRQLASGLLLV 423
             KFYPADD+KKPL NKRKP+PTKLRASITPGTVLIIL GRFKGKRVVFL+QL+SGLLLV
Sbjct: 61  --KFYPADDIKKPLHNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLV 118

Query: 424 TGPFKINGVPLRRVNQAYVIATSTKIDISGVSFDKFDDKYFAKQVXXXXXXXXXXXXXXX 603
           TGPFKINGVPLRRVNQ+YVIATSTK+DISGV+ DKFDDKYFAKQ                
Sbjct: 119 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAE 178

Query: 604 XXXXXVLPXXXXXXXXXXXXXLFKAIEGVADLKSYLGARFSLKSGDKPHELVF 762
                VLP             L K+IEGV +LK+YL ARFSLK+G KPHELVF
Sbjct: 179 KEEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  292 bits (748), Expect = 8e-77
 Identities = 153/233 (65%), Positives = 170/233 (72%)
 Frame = +1

Query: 64  MAAKQKKVSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVLPTHXXXXXXXXXXXXXX 243
           MA K  +VSRNPDLIRGVGK+SRSKMYHKRGLWAIKAKNGGV P H              
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 244 XVKFYPADDVKKPLANKRKPRPTKLRASITPGTVLIILTGRFKGKRVVFLRQLASGLLLV 423
             KFYPADDVKKP+ NKRK +PTKLR+SITPGTVLIILTGRFKGKRVVFL+QL SGLLLV
Sbjct: 61  --KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLV 118

Query: 424 TGPFKINGVPLRRVNQAYVIATSTKIDISGVSFDKFDDKYFAKQVXXXXXXXXXXXXXXX 603
           TGPFK+NGVPLRRVNQ+YVIATSTK+DI+GVS +KFDDKYF+K+V               
Sbjct: 119 TGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAE 178

Query: 604 XXXXXVLPXXXXXXXXXXXXXLFKAIEGVADLKSYLGARFSLKSGDKPHELVF 762
                 LP             L K+IE V+DLK+YL ARFSLK+G KPHELVF
Sbjct: 179 KEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  291 bits (744), Expect = 2e-76
 Identities = 152/233 (65%), Positives = 170/233 (72%)
 Frame = +1

Query: 64  MAAKQKKVSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVLPTHXXXXXXXXXXXXXX 243
           MA K  +VSRNP+LIRGVGK+SRSKMYHKRGLWAIKAKNGGV P H              
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 244 XVKFYPADDVKKPLANKRKPRPTKLRASITPGTVLIILTGRFKGKRVVFLRQLASGLLLV 423
             KFYPADDVKKPL NKRKP+PTKLR+SITPGTVLIILTGRFKGKRVVFL+QL SGLLLV
Sbjct: 61  --KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLV 118

Query: 424 TGPFKINGVPLRRVNQAYVIATSTKIDISGVSFDKFDDKYFAKQVXXXXXXXXXXXXXXX 603
           TGPFK+NGVPLRRVNQ+YVIATSTK+DI+GV+ +KF DKYF+K+V               
Sbjct: 119 TGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAE 178

Query: 604 XXXXXVLPXXXXXXXXXXXXXLFKAIEGVADLKSYLGARFSLKSGDKPHELVF 762
                 LP             L K+IE V+DLK+YL ARFSLK+G KPHELVF
Sbjct: 179 KEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>dbj|BAJ34166.1| unnamed protein product [Thellungiella halophila]
          Length = 233

 Score =  290 bits (742), Expect = 4e-76
 Identities = 156/235 (66%), Positives = 168/235 (71%), Gaps = 2/235 (0%)
 Frame = +1

Query: 64  MAAKQK--KVSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVLPTHXXXXXXXXXXXX 237
           M AKQ+  KVSRNPDLIRGVGK+SRS+MYHKRGLWAIKAKNGGV P H            
Sbjct: 1   MPAKQRMPKVSRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAAAEK 60

Query: 238 XXXVKFYPADDVKKPLANKRKPRPTKLRASITPGTVLIILTGRFKGKRVVFLRQLASGLL 417
               KFYPA+DVKKPLAN+RKP+PTKLRASITPGTVLIIL GRFKGKRVVFL+QL SGLL
Sbjct: 61  PP--KFYPAEDVKKPLANRRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLL 118

Query: 418 LVTGPFKINGVPLRRVNQAYVIATSTKIDISGVSFDKFDDKYFAKQVXXXXXXXXXXXXX 597
           LVTGPFKINGVPLRRVNQ+YVI TSTK+DISGVS DKFDDKYF K               
Sbjct: 119 LVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVSLDKFDDKYFGKVAEKKKKKGEGEFFE 178

Query: 598 XXXXXXXVLPXXXXXXXXXXXXXLFKAIEGVADLKSYLGARFSLKSGDKPHELVF 762
                   +P             L KAIE V +LK+YLGARFSLK G KPHELVF
Sbjct: 179 AEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233


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