BLASTX nr result

ID: Cephaelis21_contig00003703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003703
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   411   e-112
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   379   e-103
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   376   e-102
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   375   e-102
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   374   e-101

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  411 bits (1056), Expect = e-112
 Identities = 203/272 (74%), Positives = 229/272 (84%), Gaps = 1/272 (0%)
 Frame = -1

Query: 987 LKHIRNVRWSFADVVCDYSLGQNACALYLSLRYHLLHPDYLYYRIRELPKNFKLRXXXXX 808
           LKHIRNVRW FAD+VCDY LGQN+CALYLSLRYHLLHPDYLYYRIREL KNFKLR     
Sbjct: 120 LKHIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCH 179

Query: 807 XXXXXXVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADLIQGQMDSDYL 628
                 +KPLLEVT+TALLHDCTLLCAWSLEECGRYLETIKVYENKSAD+IQGQ D+DYL
Sbjct: 180 VDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYL 239

Query: 627 SRLNHALTTVRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 448
           SRL HALTTVRHVNKTDVVTLGSTFGSLS+IMDASMEDLARCPGIGERKVKRLYDTFHEP
Sbjct: 240 SRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEP 299

Query: 447 FKRVKPNHSSIPENPNMVNAEPGSISESKEDVNEISDANKREKKDAELMVKSALSAAFAN 268
           FKRV P+  ++PENP   NAEP S++E  E  N++ DA+KR KK+ EL VKSALSAAFA 
Sbjct: 300 FKRVVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQ 359

Query: 267 YSDRIGRKDSESQ-KNEAEEGNVAITDANSEP 175
           YS++IG++++  Q K   E+G+   T A ++P
Sbjct: 360 YSEKIGKRNNRPQGKKHEEKGHAPETKAENKP 391


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  379 bits (972), Expect = e-103
 Identities = 193/274 (70%), Positives = 218/274 (79%), Gaps = 11/274 (4%)
 Frame = -1

Query: 987 LKHIRNVRWSFADVVCDYSLGQNACALYLSLRYHLLHPDYLYYRIRELPKNFKLRXXXXX 808
           LKHIRNVRW+FADVVCDY LGQ++CALYLSLRYHLLHPDYLYYRIREL KNFKLR     
Sbjct: 120 LKHIRNVRWAFADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCH 179

Query: 807 XXXXXXVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADLIQGQMDSDYL 628
                 +KPLLEVTKTA+LHDCTLLC WSLEECGRYLETIKVYENK AD+IQGQMD+DYL
Sbjct: 180 VDVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYL 239

Query: 627 SRLNHALTTVRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 448
           SRL H+LTTVRHVNKTDVVTLG+TFGSLSNIM ASMEDLARCPGIGERKVKRL+DTFHEP
Sbjct: 240 SRLTHSLTTVRHVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEP 299

Query: 447 FKRVKPNHSSIPE--------NPNMV---NAEPGSISESKEDVNEISDANKREKKDAELM 301
           FKRV+ +  +IPE        +P       AE  S+ E K++  E  D +KR KK+ E+ 
Sbjct: 300 FKRVESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTE--DVSKRRKKEPEVT 357

Query: 300 VKSALSAAFANYSDRIGRKDSESQKNEAEEGNVA 199
           VKSALSAAFA YS R+G++ S SQ  E EE  ++
Sbjct: 358 VKSALSAAFAKYSGRVGKRKSTSQVEEKEESIIS 391


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score =  376 bits (966), Expect = e-102
 Identities = 189/265 (71%), Positives = 213/265 (80%), Gaps = 4/265 (1%)
 Frame = -1

Query: 987 LKHIRNVRWSFADVVCDYSLGQNACALYLSLRYHLLHPDYLYYRIRELPKNFKLRXXXXX 808
           LKHIRNVRW+FADVV DY LGQ++CALYLSLRYHLLHPDYLYYRIREL KNFKLR     
Sbjct: 125 LKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCH 184

Query: 807 XXXXXXVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADLIQGQMDSDYL 628
                 VKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK ADLIQG MD+DYL
Sbjct: 185 VDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYL 244

Query: 627 SRLNHALTTVRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 448
           SRL H LT+VRHVNKTDVVTLG+TFGSLS+IMDASMEDLARCPGIGERKV+RLYDTFHEP
Sbjct: 245 SRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEP 304

Query: 447 FKRVKPNHSSIPENPNMVNAEPGSISESKE-DVNEISDANKREKKDAELMVKSALSAAFA 271
           FKRV   H ++PE P  ++ +P S +E ++ D   I +   + KK+ +L VKSALSAAFA
Sbjct: 305 FKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFA 364

Query: 270 NYSDRIGRKDS---ESQKNEAEEGN 205
            Y+D+I +  S   E +K E E  N
Sbjct: 365 KYADKIAKSGSIPQEKEKGEPESSN 389


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  375 bits (963), Expect = e-102
 Identities = 188/264 (71%), Positives = 213/264 (80%)
 Frame = -1

Query: 987 LKHIRNVRWSFADVVCDYSLGQNACALYLSLRYHLLHPDYLYYRIRELPKNFKLRXXXXX 808
           LKHIRNVRW+FADVVCDY LGQN C+LYLSLRYHLLHPDYLYYRIREL KN+KLR     
Sbjct: 115 LKHIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCH 174

Query: 807 XXXXXXVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADLIQGQMDSDYL 628
                 VKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK+YENK ADLIQGQMD+DYL
Sbjct: 175 VDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYL 234

Query: 627 SRLNHALTTVRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 448
           SRL HALTT+RHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP
Sbjct: 235 SRLTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 294

Query: 447 FKRVKPNHSSIPENPNMVNAEPGSISESKEDVNEISDANKREKKDAELMVKSALSAAFAN 268
           FKRV  +H ++PE  +  ++EP  + E  E      D +K  KK+ EL VKSALSAAF+ 
Sbjct: 295 FKRVVSSHPAVPET-SQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSK 353

Query: 267 YSDRIGRKDSESQKNEAEEGNVAI 196
           Y++   ++  +S+   A E + ++
Sbjct: 354 YANTFVKRTDKSEGENAGETSCSV 377


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score =  374 bits (960), Expect = e-101
 Identities = 187/264 (70%), Positives = 212/264 (80%), Gaps = 1/264 (0%)
 Frame = -1

Query: 987 LKHIRNVRWSFADVVCDYSLGQNACALYLSLRYHLLHPDYLYYRIRELPKNFKLRXXXXX 808
           LKHIRN RW+FADVV DY LGQ++CALYLSLRYHLLHPDYLYYRIREL KNFKLR     
Sbjct: 124 LKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCH 183

Query: 807 XXXXXXVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSADLIQGQMDSDYL 628
                 VKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENK ADLIQG MD+DYL
Sbjct: 184 VDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYL 243

Query: 627 SRLNHALTTVRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEP 448
           SRL H LT+VRHVNKTDVVTLG+TFGSLS+IMDASMEDLARCPGIGERKV+RLYDTFHEP
Sbjct: 244 SRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEP 303

Query: 447 FKRVKPNHSSIPENPNMVNAEPGSISESKE-DVNEISDANKREKKDAELMVKSALSAAFA 271
           FKRV   H ++PE P  ++ +P S +E ++ D   I +   + KK+ +L VKSALSAAFA
Sbjct: 304 FKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFA 363

Query: 270 NYSDRIGRKDSESQKNEAEEGNVA 199
            Y+D+I +  S  Q+ + E   VA
Sbjct: 364 KYADKIAKSGSIPQEKKKENLKVA 387


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