BLASTX nr result

ID: Cephaelis21_contig00003689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003689
         (2229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|2...   311   6e-82
ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263...   303   1e-79
ref|NP_001118622.1| RNA recognition motif-containing protein [Ar...   289   2e-75
ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arab...   286   1e-74
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   280   1e-72

>ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|222836088|gb|EEE74509.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  311 bits (796), Expect = 6e-82
 Identities = 162/250 (64%), Positives = 183/250 (73%), Gaps = 3/250 (1%)
 Frame = +3

Query: 1488 HPPPYDPYYLAQPIHENYIYSTIPASVGTSDRNGGVNTLFVSGLPDDVKAREIHNLFRRR 1667
            H  PYDPYY   P           A+    + N G+NTLFVSGLPDDVKAREIHN+FRRR
Sbjct: 5    HHQPYDPYYQLPPA----------AAAPGGEWNSGINTLFVSGLPDDVKAREIHNIFRRR 54

Query: 1668 PGFESCQLKYTGRGNQVVAFATFVNHQSAVAALHSLNGVKFDPQTGSNLHIELARSNSRR 1847
            PGF+SCQLKYTGRGNQVVAFATF NHQSA+AALHSLNGVKFDPQ+GS LHIELARSNSRR
Sbjct: 55   PGFDSCQLKYTGRGNQVVAFATFFNHQSAIAALHSLNGVKFDPQSGSTLHIELARSNSRR 114

Query: 1848 KNKPGSGPYVVIDNRTKSSTDAHETSSDD--GEXXXXXXXXXXXXGEKDDSVVEKSEATA 2021
            K KPGSG YVVID RTK  +DAHETSSDD   +              + DS   KSEA +
Sbjct: 115  KRKPGSGAYVVIDKRTKKPSDAHETSSDDVESDPEEDPEMNNVDTAYQGDSENAKSEAAS 174

Query: 2022 DAENSVAPESEQTEKVVDGS-QACSTLFIANLGPLCTEDELKQALSQCPGFNSLKLRARG 2198
            D +N+    +E  E+  +G  + CSTLFIANLGP CTEDELKQ LSQ PGF+ LK+RA+G
Sbjct: 175  DPDNAAVAVNEIGERTAEGGVRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLKIRAKG 234

Query: 2199 GMPVAFADFQ 2228
            GMPVAFADF+
Sbjct: 235  GMPVAFADFE 244


>ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
            gi|297743102|emb|CBI35969.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  303 bits (776), Expect = 1e-79
 Identities = 165/247 (66%), Positives = 181/247 (73%), Gaps = 4/247 (1%)
 Frame = +3

Query: 1500 YDPYYLAQPIHENYIYSTIPASVGTSDRNGGVNTLFVSGLPDDVKAREIHNLFRRRPGFE 1679
            YDPYY     H               DR+G +NTLFVSGLPDDVK REIHNLFRRRPGF+
Sbjct: 6    YDPYY-----HH-----------AQGDRSG-INTLFVSGLPDDVKPREIHNLFRRRPGFD 48

Query: 1680 SCQLKYTGRGNQVVAFATFVNHQSAVAALHSLNGVKFDPQTGSNLHIELARSNSRRKNKP 1859
            SCQLKYTGRGNQVVAFATF NHQ+AVAALH+LNGVKFDPQTGS LHIELARSNSRRK  P
Sbjct: 49   SCQLKYTGRGNQVVAFATFFNHQTAVAALHALNGVKFDPQTGSILHIELARSNSRRKRVP 108

Query: 1860 GSGPYVVIDNRTKSSTDAHETSSDDG--EXXXXXXXXXXXXGEKDDSVVEKS-EATADAE 2030
            GSG YVVID R+K+ST+AHETSSDDG  E            G  DD V  KS E   D +
Sbjct: 109  GSGAYVVIDKRSKTSTNAHETSSDDGDSESDEPAKTSNPDSGNNDDLVTAKSGEMAVDPD 168

Query: 2031 NSVAPESEQTEKVVD-GSQACSTLFIANLGPLCTEDELKQALSQCPGFNSLKLRARGGMP 2207
            +++   +EQ EK  D G   CSTLFIANLGP CTEDELKQ LSQ PGFN LK+RA+GGMP
Sbjct: 169  STLTAVNEQPEKTTDAGLPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMP 228

Query: 2208 VAFADFQ 2228
            VAFADF+
Sbjct: 229  VAFADFE 235


>ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis
            thaliana] gi|332641880|gb|AEE75401.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 287

 Score =  289 bits (740), Expect = 2e-75
 Identities = 149/253 (58%), Positives = 185/253 (73%), Gaps = 4/253 (1%)
 Frame = +3

Query: 1482 MAHPPPYDPYYLAQ-PIHENYIYSTIPASVGTSDRNGGVNTLFVSGLPDDVKAREIHNLF 1658
            MA+  PYDP+Y+ Q   H +++   +P     +D  G +NTLFVSGLP+DVKAREIHNLF
Sbjct: 1    MAYHQPYDPFYVYQLHSHPHHLPPQLPL---LADEPGAINTLFVSGLPNDVKAREIHNLF 57

Query: 1659 RRRPGFESCQLKYTGRGNQVVAFATFVNHQSAVAALHSLNGVKFDPQTGSNLHIELARSN 1838
            RRR GFESCQLKYTGRG+QVVAFATF +H+ A+AA++ LNGVKFDPQTGSNLHIELARSN
Sbjct: 58   RRRHGFESCQLKYTGRGDQVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSN 117

Query: 1839 SRRKNKPGSGPYVVIDNRTKSSTDAHETSSDDGEXXXXXXXXXXXXGEKDDSVVEKSEAT 2018
            SRRK +PGSGPYVVIDNR K  + + +  SD+G+                ++   KSEA 
Sbjct: 118  SRRKERPGSGPYVVIDNRNKEISKSQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEAD 177

Query: 2019 ADAENSVAPESEQTEKVVD---GSQACSTLFIANLGPLCTEDELKQALSQCPGFNSLKLR 2189
            ++ ++     +   EK  +   G++ACSTLFIANLGP CTEDELKQ LS+ PGF+ LK+R
Sbjct: 178  SEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIR 237

Query: 2190 ARGGMPVAFADFQ 2228
            ARGGMPVAFADF+
Sbjct: 238  ARGGMPVAFADFE 250


>ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
            lyrata] gi|297330823|gb|EFH61242.1| hypothetical protein
            ARALYDRAFT_478769 [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  286 bits (733), Expect = 1e-74
 Identities = 148/253 (58%), Positives = 184/253 (72%), Gaps = 4/253 (1%)
 Frame = +3

Query: 1482 MAHPPPYDPYYLAQP-IHENYIYSTIPASVGTSDRNGGVNTLFVSGLPDDVKAREIHNLF 1658
            MA+  PYDP+Y+ QP  H +++   +P     +D  G +NTLFVSGLP+DVKAREIHNLF
Sbjct: 1    MAYHQPYDPFYVYQPHYHPHHLPPQLPQF---ADEPGAINTLFVSGLPNDVKAREIHNLF 57

Query: 1659 RRRPGFESCQLKYTGRGNQVVAFATFVNHQSAVAALHSLNGVKFDPQTGSNLHIELARSN 1838
            RRR GFESCQLKYTGRG+QVVAFATF +H+ A+AA++ LNGVKFDPQTGS LHIELARSN
Sbjct: 58   RRRYGFESCQLKYTGRGDQVVAFATFTSHRFAMAAMNELNGVKFDPQTGSTLHIELARSN 117

Query: 1839 SRRKNKPGSGPYVVIDNRTKSSTDAHETSSDDGEXXXXXXXXXXXXGEKDDSVVEKSEAT 2018
            SRRK +PGSGPYVVIDNR K  + + +  SD+G+                ++   KSEA 
Sbjct: 118  SRRKERPGSGPYVVIDNRNKELSKSQDDQSDEGDSDPDEVQEPRNSESPKENDNAKSEAD 177

Query: 2019 ADAENSVAPESEQTEKVVD---GSQACSTLFIANLGPLCTEDELKQALSQCPGFNSLKLR 2189
            ++ ++     +   EK  +   G++ACSTLFIANLGP CTEDEL+Q LS+  GFN LK+R
Sbjct: 178  SEPDSKAPSANGHLEKAYEGGSGARACSTLFIANLGPNCTEDELRQLLSRYSGFNILKIR 237

Query: 2190 ARGGMPVAFADFQ 2228
            ARGGMPVAFADF+
Sbjct: 238  ARGGMPVAFADFE 250


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
            sativus]
          Length = 262

 Score =  280 bits (716), Expect = 1e-72
 Identities = 153/249 (61%), Positives = 173/249 (69%)
 Frame = +3

Query: 1482 MAHPPPYDPYYLAQPIHENYIYSTIPASVGTSDRNGGVNTLFVSGLPDDVKAREIHNLFR 1661
            MAH P YDPYYL       Y           S+R+  +NTLF+SGLPDDVKAREIHNLFR
Sbjct: 1    MAHLP-YDPYYLYNQPDPTY-----------SERSN-INTLFISGLPDDVKAREIHNLFR 47

Query: 1662 RRPGFESCQLKYTGRGNQVVAFATFVNHQSAVAALHSLNGVKFDPQTGSNLHIELARSNS 1841
            RRPGF+SCQLKYTGRGNQVVAFATF NHQSAV ALH+LNGVKFDPQ+GS LHIELARSNS
Sbjct: 48   RRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNS 107

Query: 1842 RRKNKPGSGPYVVIDNRTKSSTDAHETSSDDGEXXXXXXXXXXXXGEKDDSVVEKSEATA 2021
            RRK+KPG G YVVID R K+  ++ ETSSDDG              E      + +EA  
Sbjct: 108  RRKHKPGGGAYVVIDKRKKTDANSQETSSDDG---------GSEPDEPSKKAQQSNEAVV 158

Query: 2022 DAENSVAPESEQTEKVVDGSQACSTLFIANLGPLCTEDELKQALSQCPGFNSLKLRARGG 2201
               N+++   E  EK   G   CSTLFIANLGP C EDELK+ L + PGFN LKLRA+ G
Sbjct: 159  TPANAISAPYEHHEKNDGG--PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSG 216

Query: 2202 MPVAFADFQ 2228
            MPVAFADF+
Sbjct: 217  MPVAFADFE 225


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