BLASTX nr result

ID: Cephaelis21_contig00003678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003678
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   423   e-116
ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus ...   399   e-109
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   394   e-107
ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-bin...   388   e-105
ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g...   388   e-105

>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
            vinifera]
          Length = 466

 Score =  423 bits (1087), Expect = e-116
 Identities = 212/282 (75%), Positives = 247/282 (87%), Gaps = 1/282 (0%)
 Frame = +1

Query: 286  KWPGWPGDCVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGPISSPDRVVLVSG 465
            KWPGWPGDCVFRL+VPVLKVGSIIGRKGELIKKMCEETRARIRVLDG + + DR+VL+SG
Sbjct: 70   KWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISG 129

Query: 466  KEEPEAPLSPAMDAVIRIFKRISGLPEAEGDDGKALGAAGVAFCSLRLLVASTQAINLIG 645
            +EEPEAPLSPAMDAVIR+FKR++GL E+EGD GKA GAAGVAFCS+RLLVASTQAINLIG
Sbjct: 130  REEPEAPLSPAMDAVIRVFKRVTGLSESEGD-GKAYGAAGVAFCSIRLLVASTQAINLIG 188

Query: 646  KQGSLIKSIQESSGASVRVLSSDEVPIYVSSEERIVELQGETLKVLKALEAVVRHLRKFL 825
            KQGSLIKSIQES+GASVRVLS DEVP Y +++ERIVELQGE LKV KALEAVV HLRKFL
Sbjct: 189  KQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFL 248

Query: 826  VDHSVLPLFEKKYNVPLAQERPTEPWSDKQLLHNTSQSG-STDFPLPAKRDASYFDRESH 1002
            VDHSVLPLFE+ YN  ++Q+R ++ W+DK LLH TSQ+G  +D+ LPAKR++ Y DRE+ 
Sbjct: 249  VDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLPAKRESLYLDRETQ 308

Query: 1003 LESQIPASLSLYGQDPSVSGLRSSGYGRAGGPIVTQVAQTMQ 1128
            +E    + L +YGQ+  +SG+RSSG GRAG PIVTQ+AQTMQ
Sbjct: 309  MEH---SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQ 347


>ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 451

 Score =  399 bits (1024), Expect = e-109
 Identities = 203/291 (69%), Positives = 239/291 (82%), Gaps = 2/291 (0%)
 Frame = +1

Query: 262  DSSGSNVNKWPGWPGDCVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGPISSP 441
            + S S    WPGWPGDCVFRL+VPVLKVGSIIGRKG+LIKKMC+ETRARIRVLD PI +P
Sbjct: 45   EPSASTSANWPGWPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTP 104

Query: 442  DRVVLVSGKEEPEAPLSPAMDAVIRIFKRISGLPEAEGDDGKALGAAGVAFCSLRLLVAS 621
            DRVVL+SGKE+ EAPLSPAMDAVIR+FKR+SGLPE    +   LGAAG+AF S+RLLVAS
Sbjct: 105  DRVVLISGKEDVEAPLSPAMDAVIRVFKRVSGLPEGNAQE---LGAAGIAFSSIRLLVAS 161

Query: 622  TQAINLIGKQGSLIKSIQESSGASVRVLSSDEVPIYVSSEERIVELQGETLKVLKALEAV 801
            TQAINLIGKQGS+IKSIQES+GASVRVLS +EVP YV+++ERIV+LQGE +KVL+ALEA+
Sbjct: 162  TQAINLIGKQGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAI 221

Query: 802  VRHLRKFLVDHSVLPLFEKKYNVPLAQERPTEPWSDKQLLHNTSQSG-STDFPLPAKRDA 978
            V HLRKFLVDHSVLPLFEK YN  ++ +R  E WSD+   H TSQ     D+PL  KRDA
Sbjct: 222  VGHLRKFLVDHSVLPLFEKNYNALISLDRQAETWSDRSSFHTTSQGRIDIDYPLSGKRDA 281

Query: 979  SYFDRESHLESQIPAS-LSLYGQDPSVSGLRSSGYGRAGGPIVTQVAQTMQ 1128
               +RE+  ESQ+P S +SLYGQDP++S +RSS + R+  PIVTQV QTMQ
Sbjct: 282  LLLERETPFESQVPLSRISLYGQDPAISSVRSSVFNRSSVPIVTQVTQTMQ 332


>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  394 bits (1012), Expect = e-107
 Identities = 204/283 (72%), Positives = 235/283 (83%), Gaps = 2/283 (0%)
 Frame = +1

Query: 286  KWPGWPGDCVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGPISSPDRVVLVSG 465
            +WPGWPGDCVFRL+VPV KVGSIIGRKGELIKKMCEETR+RIRVLD P+ +PDR+VLVSG
Sbjct: 44   RWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSG 103

Query: 466  KEEPEAPLSPAMDAVIRIFKRISGLPEAEGDDGKALGAAGVAFCSLRLLVASTQAINLIG 645
            KEEPEA LSPAMDAV+RIFKR+SGL E + ++ ++  AAG+AFCS+RLLVASTQAINLIG
Sbjct: 104  KEEPEAALSPAMDAVVRIFKRVSGLSETDAENKES--AAGLAFCSIRLLVASTQAINLIG 161

Query: 646  KQGSLIKSIQESSGASVRVLSSDEVPIYVSSEERIVELQGETLKVLKALEAVVRHLRKFL 825
            KQGSLIKSIQE++ ASVRVLS DEV  Y + +ERIVE+QGE LKVLKALEAVV HLRKFL
Sbjct: 162  KQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFL 221

Query: 826  VDHSVLPLFEKKYNVPLAQERPTEPWSDKQLLHNTSQSG-STDFPLPAKRDASYFDRESH 1002
            VDHSVLPLFEK YN   +Q+R  E WSDK LLH TS++    D P   KRD+   DRES 
Sbjct: 222  VDHSVLPLFEKTYNASTSQDRQAETWSDKSLLHTTSRTSIFADIPYSTKRDSVLADRESQ 281

Query: 1003 LESQIPAS-LSLYGQDPSVSGLRSSGYGRAGGPIVTQVAQTMQ 1128
            L+S +P+S +SLYGQD S+SG+RSS  GR G PIVT V QTMQ
Sbjct: 282  LDSFLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVIQTMQ 324


>ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
            [Cucumis sativus]
          Length = 468

 Score =  388 bits (997), Expect = e-105
 Identities = 202/289 (69%), Positives = 238/289 (82%), Gaps = 2/289 (0%)
 Frame = +1

Query: 268  SGSNVNKWPGWPGDCVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGPISSPDR 447
            +G +  KWPGWPGDCVFRL+VPV+KVGSIIGRKG+LIKKMCEETRARIRVLDG + +PDR
Sbjct: 67   TGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDR 126

Query: 448  VVLVSGKEEPEAPLSPAMDAVIRIFKRISGLPEAEGDDGKALGAAGVAFCSLRLLVASTQ 627
            VVL+SGKEE E+PLSPAMDAVIR+FKR+SGL E E D+ KA      +FCS+RLLVASTQ
Sbjct: 127  VVLISGKEELESPLSPAMDAVIRVFKRVSGLSENE-DEAKA------SFCSIRLLVASTQ 179

Query: 628  AINLIGKQGSLIKSIQESSGASVRVLSSDEVPIYVSSEERIVELQGETLKVLKALEAVVR 807
            AINLIGKQGSLIKSIQES+GASVRVLS DE+P Y  ++ER+VELQGE+LKVLKALE VV 
Sbjct: 180  AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 239

Query: 808  HLRKFLVDHSVLPLFEKKYNVPLAQERPTEPWSDKQLLHNTSQS-GSTDFPLPAKRDASY 984
            HLRKFLVDHSVLPLFEK +N P +Q+R TE W+DK  L   SQS  S ++    KR++ +
Sbjct: 240  HLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLF 299

Query: 985  FDRESHLESQIPAS-LSLYGQDPSVSGLRSSGYGRAGGPIVTQVAQTMQ 1128
             DRE+H +S I +S +SLYGQD  +  +RSSG GR+GGPIVTQV QTMQ
Sbjct: 300  LDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQ 348


>ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  388 bits (997), Expect = e-105
 Identities = 204/298 (68%), Positives = 239/298 (80%), Gaps = 2/298 (0%)
 Frame = +1

Query: 241  EAEAKGDDSSGSNVNKWPGWPGDCVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRVL 420
            EA+A    S+     +WPGWPGDCVFRL+VPV KVGSIIGRKGELIKKMCEETR+RIRVL
Sbjct: 31   EADAAATASTPPE-KRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVL 89

Query: 421  DGPISSPDRVVLVSGKEEPEAPLSPAMDAVIRIFKRISGLPEAEGDDGKALGAAGVAFCS 600
            D P+ +PDR+VLVSGKE+PEA LSPAMDAV+RIFKR+SG  E + ++ ++  AAG+AF S
Sbjct: 90   DAPLGTPDRIVLVSGKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQES--AAGLAFSS 147

Query: 601  LRLLVASTQAINLIGKQGSLIKSIQESSGASVRVLSSDEVPIYVSSEERIVELQGETLKV 780
            +RLLVASTQAINLIGKQGSLIKSIQE++ ASVRVLS DEV  Y ++ ERIVE+QGE LKV
Sbjct: 148  IRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKV 207

Query: 781  LKALEAVVRHLRKFLVDHSVLPLFEKKYNVPLAQERPTEPWSDKQLLHNTSQSG-STDFP 957
            LKALEAVV HLRKFLVDHSVLPLFEK YN P +Q+R  E WSDK LLH +S++    D P
Sbjct: 208  LKALEAVVGHLRKFLVDHSVLPLFEKTYNAPTSQDRQAETWSDKSLLHTSSRTSIFADIP 267

Query: 958  LPAKRDASYFDRESHLESQIPAS-LSLYGQDPSVSGLRSSGYGRAGGPIVTQVAQTMQ 1128
            L  KRD+   DRES L+  +P+S +SLYGQD S+SG+ SS  GR G PIVT V QTMQ
Sbjct: 268  LSTKRDSVLADRESQLDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPIVTTVIQTMQ 325


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