BLASTX nr result
ID: Cephaelis21_contig00003608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00003608
(5571 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] 115 5e-49
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 157 1e-46
emb|CAN71772.1| hypothetical protein VITISV_002507 [Vitis vinifera] 107 4e-46
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 130 3e-45
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 124 2e-44
>emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]
Length = 1566
Score = 115 bits (287), Expect(2) = 5e-49
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Frame = +2
Query: 2627 NSAVFGNLFANIQRAENRVKELEEHHAQ-TQQPSDLTYFNHFQAQLLKSLAEEEDYWKQK 2803
N VFG + N++ A RV ++ Q T +L + + K EE W+QK
Sbjct: 679 NKEVFGKVGVNLRMALGRVSFWDDQERQRTLNEQELEARKEAKEEFKKWAIMEEISWRQK 738
Query: 2804 AR*K-LQDWDKNTAFFH--VSVVARRAQLRITKVRDDSGAIISDIEDIKQHAVHFYENLF 2974
+R L++ DKNT FFH + +RR L+ KVR G +SD +DI++ V Y++L
Sbjct: 739 SRQIWLKEGDKNTGFFHKMANSNSRRNCLKKIKVR---GVWLSDEQDIQRGVVRAYQDLL 795
Query: 2975 YDEAS-DPLRL*LATDQFLSYIASLVSQ*DNNRLLAPVSLEEVKRVVWYLDPDSVARSDG 3151
D P L D + + + RL SLEEV + L+ D DG
Sbjct: 796 SDPGGWHPSMSSLEFDS--------IGREEAARLEEMFSLEEVYLALSELNGDKAPGPDG 847
Query: 3152 FSGRFHQASWDIIAPDLHNAV*EFFAGVSIPRAIGSTLIVLLPKKPSSVFFGDYRPISLC 3331
F F Q WD + ++ +FF R++ ST +VL+PKK + DYRPISL
Sbjct: 848 FPIAFWQFCWDFVKDEIMGLFKDFFERGKFVRSLNSTFLVLVPKKXGAEDLRDYRPISLV 907
Query: 3332 TFINKIFTHIFCDHMQ*VLVRLIFPEQSTFLKERKIADNLLVA*KVGQHLDKKVRG--WN 3505
+ KI + + ++ V+ +++ Q+ F++ R+I D L+A + +D ++G
Sbjct: 908 GGLYKILAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAALIA---NEAIDSMLKGDEAG 964
Query: 3506 VILKLNITKTFD 3541
V+ KL++ K +D
Sbjct: 965 VLCKLDLEKAYD 976
Score = 109 bits (273), Expect(2) = 5e-49
Identities = 123/504 (24%), Positives = 203/504 (40%), Gaps = 39/504 (7%)
Frame = +1
Query: 3619 SRESKQGDPLSLYLFILFVEVLGHGLKQLQGDGGIFSYSLP---HYAPLISHLAFVDNLV 3789
+R +QGDP+S YLF+L +E L + + G + L +SHL F D+ +
Sbjct: 987 TRGLRQGDPISPYLFVLGMEALSCLINKAVRGGFLSGCKLRGRGRNGIQVSHLLFADDTL 1046
Query: 3790 VFVRGLRSSLRVVFQFLMDYELATGQYVNKAKRSFLASKHCFYFQIRRLETVSGIKRASL 3969
VF + + + V+ LM +E +G +N K L ++ L + G K SL
Sbjct: 1047 VFCKDSQDQMAVLSWLLMWFEAISGLNINLEKSEILPVGSVENAEV--LASELGCKVGSL 1104
Query: 3970 PFKYLGAVIFKGRRKGVYFQHLLDKVHSKLAG*RGRLLNVGGQLILIKHVLTAIPTYTLA 4149
P YLG + V + + +++ +LA + + ++ GG+L LI L ++P Y ++
Sbjct: 1105 PSTYLGLPXGAPHKSVVVWDGVEERMRKRLALWKRQFISKGGRLTLIXSTLASMPIYLMS 1164
Query: 4150 TFQPQKVVLVCLESFMVKFLWGSDEANTRKI*RSWAGLAFPYNENGLGVRRLHDVIFAFF 4329
+ +VV + LE FLWG R +W + + GLG+R + A
Sbjct: 1165 LMRIPRVVRLRLEKIQRDFLWGGGALEKRPHLVNWDVVRSHKMKGGLGIRNFSILNRALL 1224
Query: 4330 CKL*WKWWFSL------------------GIWSSYVQKVGWGRSFSGFW--IFAIDPFMR 4449
CK W W F+ G W S + G+G G W I +
Sbjct: 1225 CK--WSWRFAAKRESFWKLVISSKYGEEEGGWISCEVREGYG---VGLWKEIRKEGVLLF 1279
Query: 4450 THITVQIQDG-GCSLLFDNWMSAGPLVDHFDLQDMDNLRSIPV--NAMLVD--------G 4596
+++ + DG D W PL + F +L + V +A + D G
Sbjct: 1280 KNVSFSVGDGRRVKFWKDIWCXNTPLCEAF-----PSLFAFAVSQDAWVEDCWDYMGDAG 1334
Query: 4597 VWNISLLSEF--LPSEAVAHITSF---TFIFYPTPDLFFWNHXXXXXXXXXXXXDLTRAR 4761
WN F EAV + S + D WN + +
Sbjct: 1335 GWNPCFSRSFNDWELEAVXSLLSVLQGKRLNVGMEDRVVWNASKSGSFSVKSLYNTLDSG 1394
Query: 4762 GSVQPEIFRNVWHSSIPLKVSLFF*RLLNVVLAYPEILRSLGISLASKCLFIGCSAEDLL 4941
G+V P +R +W +P KV F + + L+ G SLA++C F+ C E+ +
Sbjct: 1395 GAV-PFPWRIIWSPCVPTKVGFFAWEASWGKVLTQDHLKRRGWSLANRC-FLCCDDEETI 1452
Query: 4942 LHGFWHCAFAHSIWHFFSCLFKIS 5013
H HC A +W+ +F+++
Sbjct: 1453 NHILIHCPKAKVLWNLMFTMFRVN 1476
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 157 bits (398), Expect(2) = 1e-46
Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 7/333 (2%)
Frame = +2
Query: 2564 GYGMYHFSAXXXXXXXXXXXXNSAVFGNLFANIQRAENRVKELEEHHAQTQQPSDLTYFN 2743
G+GM A N VFG++ ++ A V +++ + SD Y
Sbjct: 273 GHGMTRLQAKLKHMKQVFRHWNRTVFGDVDRKVRMAVEEVNRIQQI-IDSVGFSDQLYAQ 331
Query: 2744 HFQAQLL--KSLAEEEDYWKQKAR*-KLQDWDKNTAFFHVSVVARRAQLRITK----VRD 2902
+A L+ K+L +++ W++K R + D+NTA+FH R +++R TK
Sbjct: 332 ELEAHLILTKALHYQDELWREKLRDQRFIHGDRNTAYFH-----RISKVRATKNTISFLQ 386
Query: 2903 DSGAIISDIEDIKQHAVHFYENLFYDEASDPLRL*LATDQFLSYIASLVSQ*DNNRLLAP 3082
D A+I+D I+ H +++++ +F + S + D + I SLVS DNN LL
Sbjct: 387 DGDAVITDPARIEVHVLNYFQAIFSVDNSC-----IQNDLVVDTIPSLVSNVDNNSLLRL 441
Query: 3083 VSLEEVKRVVWYLDPDSVARSDGFSGRFHQASWDIIAPDLHNAV*EFFAGVSIPRAIGST 3262
EVK V+ L+ D +GF G F+Q WDI+ D+ +V +FF + + I S
Sbjct: 442 PLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSN 501
Query: 3263 LIVLLPKKPSSVFFGDYRPISLCTFINKIFTHIFCDHMQ*VLVRLIFPEQSTFLKERKIA 3442
LIVL+PK P + GDYRPI+L F KI + I D + + +R+I EQ F+++R I+
Sbjct: 502 LIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRGFIRDRDIS 561
Query: 3443 DNLLVA*KVGQHLDKKVRGWNVILKLNITKTFD 3541
+++A + L+K+ G NV LK++I K FD
Sbjct: 562 KCVILASEAINLLEKRQYGGNVALKVDIAKAFD 594
Score = 59.3 bits (142), Expect(2) = 1e-46
Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 13/271 (4%)
Frame = +3
Query: 1785 LIWNIRGIRSLASV*RLRKLYRLNAFSFVISIEPFITCDRIME-VQNKLGFFHSYASASN 1961
L W +RGI ++ + L+ + + + EP I + + + +G +
Sbjct: 4 LYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVSKYCVNGRE 63
Query: 1962 ----KIWIF*QHNFSF*IVSQIDQMFHLRGSYPMAIEDFFCTSIYTKCSPIEHRSLWVGL 2129
+W S ++ DQ L S + + ++Y ++ R LW L
Sbjct: 64 ILQPNLWALWGREVSAIVMFISDQCIALEISCHQST--VYVAAVYASTFYLKRRQLWAEL 121
Query: 2130 LIFQEKVLASPWLIAGDFNVVSTLEDYASPLPTQLNPLNEFVDFLS*VALQKLPISGGIY 2309
Q PWL GDFN V + P +F+++ + L LP G Y
Sbjct: 122 TNLQG-CFQGPWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLPTLGAFY 180
Query: 2310 TWT-XXXXXXXXXXKLDWILFNDKWL*NFF---SCSI---ELLNRTTLDHKLLLLTYDAP 2468
TW+ +LD + N++W+ NF+ SCS L R DH LL++ D
Sbjct: 181 TWSNGRLGSDNVALRLDRAICNEEWV-NFWRSSSCSALGNSALVRHQSDHHPLLMSMDFC 239
Query: 2469 TSTPK-VFRFQNIWLRWLDFL*AVRTSWAEH 2558
TS F+F W D V +W++H
Sbjct: 240 TSQRSGNFKFFKTWTEHEDCRRIVAENWSKH 270
Score = 75.5 bits (184), Expect = 2e-10
Identities = 41/128 (32%), Positives = 65/128 (50%)
Frame = +1
Query: 3631 KQGDPLSLYLFILFVEVLGHGLKQLQGDGGIFSYSLPHYAPLISHLAFVDNLVVFVRGLR 3810
+QGDPLS LF L EVL L DG + S +H+ + D++++F G +
Sbjct: 646 RQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADDVLIFCTGTK 705
Query: 3811 SSLRVVFQFLMDYELATGQYVNKAKRSFLASKHCFYFQIRRLETVSGIKRASLPFKYLGA 3990
++R + + Y +GQ +N AK F S +++ + ++ G SLPF YLG
Sbjct: 706 RNIRRLIKIFSQYSEVSGQLINNAKSRFFTSA-MTGSRVQMISSLLGFNVGSLPFTYLGC 764
Query: 3991 VIFKGRRK 4014
IF+G+ K
Sbjct: 765 PIFRGKPK 772
>emb|CAN71772.1| hypothetical protein VITISV_002507 [Vitis vinifera]
Length = 1057
Score = 107 bits (266), Expect(3) = 4e-46
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 7/333 (2%)
Frame = +2
Query: 2564 GYGMYHFSAXXXXXXXXXXXXNSAVFGNLFANIQRAENRVKELEEHHAQTQQPSDLTYFN 2743
G Y +A N VFGNL N + A +V + ++ + + T
Sbjct: 91 GTASYRLAAKMKELKQKLKVWNREVFGNLEXNKRAALQQVDYWDHVESERRLSLEETELK 150
Query: 2744 HFQAQLLKS-LAEEEDYWKQKAR*K-LQDWDKNTAFFHVSVVARRAQLRITKVRDDSGAI 2917
+ K + EE +W+Q +R L++ DKNT FFH A R + +++ D G
Sbjct: 151 KEAKESYKKWVLLEESHWRQLSREVWLKEGDKNTGFFHRMANAHRYNNSLDRIKID-GVW 209
Query: 2918 ISDIEDIKQHAVHFY-----ENLFYDEASDPLRL*LATDQFLSYIASLVSQ*DNNRLLAP 3082
+ + +D++ + Y E+L + + ++L DQ +SQ + L P
Sbjct: 210 LVEEQDVRXGIANAYHQRLSEDLGWKADIEGIQL----DQ--------ISQQEAESLEIP 257
Query: 3083 VSLEEVKRVVWYLDPDSVARSDGFSGRFHQASWDIIAPDLHNAV*EFFAGVSIPRAIGST 3262
S E+ + + D DGF+ F Q+ WD + ++ EF S +++ +T
Sbjct: 258 FSENEIHSALMEMSGDKAPGPDGFTMAFWQSCWDFVKEEILEMFKEFHEQGSFLKSLNNT 317
Query: 3263 LIVLLPKKPSSVFFGDYRPISLCTFINKIFTHIFCDHMQ*VLVRLIFPEQSTFLKERKIA 3442
+VL+PKK + GD+RPISL + K+ + + ++ VL +++ P Q+ F+ R+I
Sbjct: 318 FLVLIPKKGGAADLGDFRPISLLXGLYKLMAKVLANRLKRVLNKVVAPTQNAFVMGRQIL 377
Query: 3443 DNLLVA*KVGQHLDKKVRGWNVILKLNITKTFD 3541
D L+A +V K+ + +I KL+I K +D
Sbjct: 378 DASLIANEVIDSWQKR-KEKGLICKLDIEKAYD 409
Score = 95.1 bits (235), Expect(3) = 4e-46
Identities = 118/506 (23%), Positives = 199/506 (39%), Gaps = 31/506 (6%)
Frame = +1
Query: 3619 SRESKQGDPLSLYLFILFVEVLGHGLKQLQGDGGIFSYSLP---HYAPLISHLAFVDNLV 3789
S+ +QGDPLS YLF+L +EVL +++ G + S+ + ISHL F D+ +
Sbjct: 445 SKGLRQGDPLSPYLFVLGMEVLDALIRRAVAGGYLSGCSIEGDRRHNLKISHLFFADDTI 504
Query: 3790 VFVRGLRSSLRVVFQFLMDYELATGQYVNKAKRSFLASKHCFYFQIRRLETVSGIKRASL 3969
VF + L + L+ +E A+ +N K + +I + G + SL
Sbjct: 505 VFCEANKEHLTHLSWILLWFEAASSLRINLDKSEIIXVG--VVEEIEEMAVELGXRVGSL 562
Query: 3970 PFKYLGAVIFKGRRKGVYFQHLLDKVHSKLAG*RGRLLNVGGQLILIKHVLTAIPTYTLA 4149
P YLG + + + + +KV +LA + + ++ GG++ LI+ VL ++P Y ++
Sbjct: 563 PSHYLGLPLGAPNKASSVWDGVEEKVRRRLARWKRQYISKGGRITLIRSVLASMPIYHMS 622
Query: 4150 TFQPQKVVLVCLESFMVKFLWGSDEANTRKI*RSWAGLAFPYNENGLGVRRLHDVIFAFF 4329
F+ K V L+ FLWG A + + ++ GLG+R+L V+
Sbjct: 623 LFRMPKSVARRLDKVQRDFLWGGGSAERKAHLIKXEAICEDKSKGGLGLRKL--VLLNKX 680
Query: 4330 CKL*WKWWFSL---GIWSSYV------------QKVGWGRSFSGFW--IFAIDPFMRTHI 4458
W W F+ +W + K +G G W I+ + ++
Sbjct: 681 LLGKWMWRFAYDKDDLWKQVITAKYGQEGHGWRAKRAYGAIDVGVWKEIWKETDWCWDNM 740
Query: 4459 TVQIQDGG-CSLLFDNWMSAGPLVDHF-DLQDMDNLRSIPVNAM----LVDGVWNISLLS 4620
+ G + D W L +F L M + R+ V M G WN+ L
Sbjct: 741 GFIVGKGSKINFWTDVWCKGTRLSQNFPHLYAMTSHRNATVEEMWDQNFGQGGWNLRFLR 800
Query: 4621 EF--LPSEAVAHITSFTFIFYPT--PDLFFWNHXXXXXXXXXXXXDL-TRARGSVQPEIF 4785
+F L + + ++ + P+ D W L R V P
Sbjct: 801 DFNDLEMDMIGNLLHVLRDYKPSMEEDSVCWKGGRNGKFRVKEAYRLVVRPNDIVFPS-- 858
Query: 4786 RNVWHSSIPLKVSLFF*RLLNVVLAYPEILRSLGISLASKCLFIGCSAEDLLLHGFWHCA 4965
R +W S+P KV+ + + + L+ G L + C G E+ + H HC
Sbjct: 859 RCIWVDSVPTKVAFYAWEATWGRVLTLDRLQKRGWQLPNCCFLCG-REEETVNHILIHCI 917
Query: 4966 FAHSIWHFFSCLFKISLDISIGFFGV 5043
+W DI +G GV
Sbjct: 918 VIRVLW-----------DIVLGLLGV 932
Score = 33.9 bits (76), Expect(3) = 4e-46
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 2241 LNEFVDFLS*VALQKLPISGGIYTWTXXXXXXXXXXKLDWILFNDKWL*NFFSCSIELLN 2420
+ F + + L LP+ GG++TW+ +LD L + WL F L
Sbjct: 1 MRRFAHXIDDLGLVDLPLQGGVFTWS-GGLNNQSWARLDRFLVSPSWLDKFSGVIQRRLP 59
Query: 2421 RTTLDHKLLLL 2453
R DH +LL
Sbjct: 60 RPVSDHFXILL 70
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 130 bits (326), Expect(2) = 3e-45
Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 6/311 (1%)
Frame = +2
Query: 2627 NSAVFGNLFANIQRAENRVKELEE-HHAQTQQPSDLTYFNHFQAQLLKSLAEEEDYWKQK 2803
NS+ FG++ NI+ E+R+ L+ + + Q +L Q +L L +E +W Q
Sbjct: 282 NSSEFGHIDRNIEELEDRIHNLDLISNGRDLQLEELAERRSSQMELWVWLRRKEAFWAQN 341
Query: 2804 AR*K-LQDWDKNTAFFHVSVVARRAQLRITKVRDDSGAIISDIEDIKQHAVHFYENLFYD 2980
+R K +++ DKNT +FH R+ + I + ++G ++SD I AV F++++F +
Sbjct: 342 SRAKWIKEGDKNTKYFHTLASTRKKKNTIPALITNNG-VVSDPAGIHHEAVSFFKSIFKE 400
Query: 2981 EASDPLRL*LATDQFLSYIASLVSQ*DNNRLLAPVSLEEVKRVVWYLDPDSVARSDGFSG 3160
+ S R QF S VSQ L P S +EV V DP DG++
Sbjct: 401 DFSS--RPVFNGLQFRSLSCEQVSQ-----LTEPFSHKEVDEAVESCDPQKAPGPDGYNF 453
Query: 3161 RFHQASWDIIAPDLHNAV*EFFAGVSIPRAIGSTLIVLLPKKPSSVFFGDYRPISLCTFI 3340
RF + SWDII D++N V F+ S+P+ I L+ K+ D+RPIS+ I
Sbjct: 454 RFIKDSWDIIKLDVYNIVENFWNSGSLPKGSNVAFIALIAKREVPEGLNDFRPISMVGCI 513
Query: 3341 NKIFTHIFCDHMQ*VLVRLIFPEQSTFLKERKIADNLLVA*KVGQHLD----KKVRGWNV 3508
KI + +Q V+ LI P QS+F+ R+I D L+A G+ +D KKV+
Sbjct: 514 YKIIAKLLARRLQKVMDSLIGPYQSSFIAGRQILDGALIA---GELIDTCRRKKVQ--LS 568
Query: 3509 ILKLNITKTFD 3541
ILKL+ K FD
Sbjct: 569 ILKLDFHKAFD 579
Score = 82.4 bits (202), Expect(2) = 3e-45
Identities = 70/263 (26%), Positives = 107/263 (40%), Gaps = 7/263 (2%)
Frame = +3
Query: 1791 WNIRGIRSLASV*RLRKLYRLNAFSFVISIEP---FITCDRIMEVQNKLG----FFHSYA 1949
WNIRG+ + LRKL + F+ E + I + N F S
Sbjct: 6 WNIRGLNARVKKSSLRKLISRHDPKFIFLQETKMESLNPKTIRSIWNSDDIDWLFIPSIG 65
Query: 1950 SASNKIWIF*QHNFSF*IVSQIDQMFHLRGSYPMAIEDFFCTSIYTKCSPIEHRSLWVGL 2129
++ + ++ FS + L G P ++Y C + +W +
Sbjct: 66 NSGGLLSMWKIDYFSLTSHKSENNWIALNGKIPSKNFQGVLVNVYNPCCRVSRSKVWTSI 125
Query: 2130 LIFQEKVLASPWLIAGDFNVVSTLEDYASPLPTQLNPLNEFVDFLS*VALQKLPISGGIY 2309
+ + SP L+ GDFN V D S + +QL L +F +F+ L ++ S G +
Sbjct: 126 SDYWAES-QSPMLMVGDFNEVLDPSDRGSGISSQLGVL-DFKNFIQQTHLMEISASDGWF 183
Query: 2310 TWTXXXXXXXXXXKLDWILFNDKWL*NFFSCSIELLNRTTLDHKLLLLTYDAPTSTPKVF 2489
TW KLD +L N +W+ F S + +L R DH LL+ D P+ F
Sbjct: 184 TW----FSGQAKSKLDRLLVNPEWVSLFPSLQVSILRRNLSDHCPLLVKSDELNWGPRPF 239
Query: 2490 RFQNIWLRWLDFL*AVRTSWAEH 2558
RFQN WL L ++ WA H
Sbjct: 240 RFQNCWLSHPGCLQIIKDVWASH 262
Score = 111 bits (277), Expect(2) = 4e-25
Identities = 122/518 (23%), Positives = 206/518 (39%), Gaps = 43/518 (8%)
Frame = +1
Query: 3622 RESKQGDPLSLYLFILFVEVLGHGLKQLQGDGGIFSYSLPHYAPLISHLAFVDNLVVFVR 3801
R +QGDPLS +LF L VE L +++ G + I+HL + D+ ++F
Sbjct: 628 RGLRQGDPLSPFLFDLVVETLSLVIQKASHLGLWEGVEVTKNGEKITHLQYADDTIIFCP 687
Query: 3802 GLRSSLRVVFQFLMDYELATGQYVNKAKRSFLASKHCFYFQIRRLETVSGIKRASLPFKY 3981
L + + L+ ++LA+G VN K S + H ++ K LPF Y
Sbjct: 688 PNLDYLLNIKKTLILFQLASGLQVNFHKSSIMGI-HVDEIWLQEAANALLCKVGRLPFTY 746
Query: 3982 LGAVIFKGRRKGVYFQHLLDKVHSKLAG*RGRLLNVGGQLILIKHVLTAIPTYTLATFQP 4161
LG I + ++ ++ K+ KLA +GR+L++ G++ LIK ++++P Y ++ F
Sbjct: 747 LGLPIGGNISRLAHWDPIIKKIEGKLASWKGRMLSIAGRITLIKASISSLPLYYMSLFPA 806
Query: 4162 QKVVLVCLESFMVKFLWGSDEANTRKI*RSWAGLAFPYNENGLGVRRLHDVIFAFFCKL* 4341
+ V+ + FLW + + +W + P GL L + + K
Sbjct: 807 PRGVIEAINKLQRNFLWSGELRKSSLALVAWNQVVLPKESGGLNCGNLLNRNISLLFK-- 864
Query: 4342 WKWWFS---LGIWSSYV-QKVGWGRSF----------SGFWIF---------AIDPFMRT 4452
W W S +W + +K G+ + SG W F + F++T
Sbjct: 865 WIWRLSHDPESLWQKVIKEKYGYSHTTTVHDLCIPKGSGPWRFICASILNHPSARSFVKT 924
Query: 4453 HITVQIQDGGCSLLF-DNWMSAGPLVDHFDLQDMDNLRSIPVNAMLV----------DGV 4599
+ + +G +L + D W+ PL F L +I N M + V
Sbjct: 925 KLRKAVGNGVKTLFWLDTWLGDSPLKLRF-----PRLFTIVDNPMAYIASCGSWCGREWV 979
Query: 4600 WNISLLSEFLPSEA-----VAHITSFTFIFYPTPDLFFWN-HXXXXXXXXXXXXDLTRAR 4761
WN S F P +A + + + T D W H +LT
Sbjct: 980 WNFSWSRVFRPRDAEEWEELQGLLGSVCLSPSTDDRLIWTPHKSGAFSVKSCSKELTNTA 1039
Query: 4762 GSVQPE--IFRNVWHSSIPLKVSLFF*RLLNVVLAYPEILRSLGISLASKCLFIGCS-AE 4932
Q + I+ +W IP ++ +F L L + L +L I + I C+ A
Sbjct: 1040 LKPQSKIRIWGRLWRGLIPPRIEVFSWVALLGKLNSRQKLATLNIIPPDDAVCIMCNGAP 1099
Query: 4933 DLLLHGFWHCAFAHSIWHFFSCLFKISLDISIGFFGVF 5046
+ H HC FA SIW ++ ++ +S F F
Sbjct: 1100 ETSDHLLLHCPFASSIWLWWLGIWNVSWVFPKNLFEAF 1137
Score = 33.5 bits (75), Expect(2) = 4e-25
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Frame = +2
Query: 5120 ICWSLWKTHTESVFQAFQPSFSRTVSFVVQVLHGITLARPLHFCPSSITEVLQ------F 5281
I W++WK +F+ S ++ V+ L F P SI EVL+ +
Sbjct: 1160 IIWTIWKERNARIFRGISCSSNKLQDLVIIRLMWWIKGWGEAF-PYSIVEVLRHPQCLSW 1218
Query: 5282 GFVSCAPKLTRVI--ALSWSYPSDG-LKLNVD 5368
++ AP T V + WS P+DG +K NVD
Sbjct: 1219 DYLKAAPAATAVSVDGMLWSPPNDGVMKWNVD 1250
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 124 bits (310), Expect(2) = 2e-44
Identities = 74/244 (30%), Positives = 127/244 (52%)
Frame = +1
Query: 3619 SRESKQGDPLSLYLFILFVEVLGHGLKQLQGDGGIFSYSLPHYAPLISHLAFVDNLVVFV 3798
SR +QGDPLS YLF+L E L L+ + G + + AP+ISHL F D+ ++ +
Sbjct: 448 SRGLRQGDPLSPYLFLLVAEGLSSMLQGAENRGDLVGIRVCREAPMISHLLFADDSLILM 507
Query: 3799 RGLRSSLRVVFQFLMDYELATGQYVNKAKRSFLASKHCFYFQIRRLETVSGIKRASLPFK 3978
+ +++ + L Y +GQ +++AK S S++ + I +L K
Sbjct: 508 QADKNNADHLKAILDIYCQNSGQKISEAKSSIFFSRNTAVEDKAAVCGSLDIMTEALNDK 567
Query: 3979 YLGAVIFKGRRKGVYFQHLLDKVHSKLAG*RGRLLNVGGQLILIKHVLTAIPTYTLATFQ 4158
YLG G K F+HL+D+V++++ G + ++L+ GG+ +LIK + AIP + ++ F+
Sbjct: 568 YLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMSVFR 627
Query: 4159 PQKVVLVCLESFMVKFLWGSDEANTRKI*RSWAGLAFPYNENGLGVRRLHDVIFAFFCKL 4338
K + C+ + +F WG DE + R ++W + P GLG R L+ A K
Sbjct: 628 IPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQ 687
Query: 4339 *WKW 4350
W++
Sbjct: 688 IWRF 691
Score = 85.5 bits (210), Expect(2) = 2e-44
Identities = 61/219 (27%), Positives = 104/219 (47%)
Frame = +2
Query: 2867 RRAQLRITKVRDDSGAIISDIEDIKQHAVHFYENLFYDEASDPLRL*LATDQFLSYIASL 3046
RR + +I + D++G +D + + +++NLF E + L +
Sbjct: 225 RRRRKKIKGLIDENGCFQTDEDRMSNIVYGYFQNLFSAEVTQ------IDGSSLLDVQRK 278
Query: 3047 VSQ*DNNRLLAPVSLEEVKRVVWYLDPDSVARSDGFSGRFHQASWDIIAPDLHNAV*EFF 3226
V+ N LLAP + EEVK ++ + DG F++ WD++ DL V +
Sbjct: 279 VTGDMNFGLLAPYTAEEVKNALFSIGDLKAPGPDGLHAVFYKRFWDMLESDLVKEVLDAI 338
Query: 3227 AGVSIPRAIGSTLIVLLPKKPSSVFFGDYRPISLCTFINKIFTHIFCDHMQ*VLVRLIFP 3406
+ IP T +V++PK +RPISLC + KI + + + ++ +L +I
Sbjct: 339 NTMKIPDGWNDTTVVMIPKVDKPDRVTQFRPISLCNVVYKIISKMLANRLKCLLPEIISD 398
Query: 3407 EQSTFLKERKIADNLLVA*KVGQHLDKKVRGWNVILKLN 3523
+QS F+ R I DN+LVA + H KK +G V ++N
Sbjct: 399 QQSAFVPGRLITDNVLVAYEC-LHTMKKKKGRKVQYRVN 436