BLASTX nr result

ID: Cephaelis21_contig00003004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003004
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...   160   5e-37
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   154   3e-35
ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote...   154   3e-35
gb|AFK45871.1| unknown [Medicago truncatula]                          152   2e-34
ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding prote...   152   2e-34

>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score =  160 bits (406), Expect = 5e-37
 Identities = 80/98 (81%), Positives = 84/98 (85%)
 Frame = -3

Query: 899 SNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSIFLVVEPRSRVSRGFAFITMDTAEDAN 720
           SNPGNTLYVTGLSTRVTERDLE+HFSKEGKVKS+FLVVEPRSR+SRGFAFITMD+ EDAN
Sbjct: 62  SNPGNTLYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDAN 121

Query: 719 RCIKHLNQSVLEGRYIXXXXXXXXXXXXXTPGHYLGLK 606
           RCIKHLNQSVLEGRYI             TPGHYLGLK
Sbjct: 122 RCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLK 159


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  154 bits (390), Expect = 3e-35
 Identities = 75/101 (74%), Positives = 83/101 (82%)
 Frame = -3

Query: 908 EVASNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSIFLVVEPRSRVSRGFAFITMDTAE 729
           E A+NPGNTLYVTGLSTRVTERDLE+HFSKEGKV S FLVVEPR+R+SRGFAF+TMD  +
Sbjct: 58  EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVD 117

Query: 728 DANRCIKHLNQSVLEGRYIXXXXXXXXXXXXXTPGHYLGLK 606
           DANRC+KHLNQS+LEGRYI             TPGHYLGLK
Sbjct: 118 DANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK 158


>ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
           partial [Cucumis sativus]
          Length = 238

 Score =  154 bits (390), Expect = 3e-35
 Identities = 75/101 (74%), Positives = 83/101 (82%)
 Frame = -3

Query: 908 EVASNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSIFLVVEPRSRVSRGFAFITMDTAE 729
           E A+NPGNTLYVTGLSTRVTERDLE+HFSKEGKV S FLVVEPR+R+SRGFAF+TMD  +
Sbjct: 52  EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVD 111

Query: 728 DANRCIKHLNQSVLEGRYIXXXXXXXXXXXXXTPGHYLGLK 606
           DANRC+KHLNQS+LEGRYI             TPGHYLGLK
Sbjct: 112 DANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK 152


>gb|AFK45871.1| unknown [Medicago truncatula]
          Length = 270

 Score =  152 bits (383), Expect = 2e-34
 Identities = 75/99 (75%), Positives = 82/99 (82%)
 Frame = -3

Query: 902 ASNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSIFLVVEPRSRVSRGFAFITMDTAEDA 723
           A+NPGNTLYVTGLS+RVT+RDLEDHFSKEGKV S FLVVEPR+R+SRGFAF+TMD+ EDA
Sbjct: 57  ATNPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDA 116

Query: 722 NRCIKHLNQSVLEGRYIXXXXXXXXXXXXXTPGHYLGLK 606
            RCIKHLNQSVLEGRYI             TPGHYLGLK
Sbjct: 117 ERCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLK 155


>ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Vitis vinifera]
          Length = 228

 Score =  152 bits (383), Expect = 2e-34
 Identities = 75/98 (76%), Positives = 81/98 (82%)
 Frame = -3

Query: 899 SNPGNTLYVTGLSTRVTERDLEDHFSKEGKVKSIFLVVEPRSRVSRGFAFITMDTAEDAN 720
           SNPGNTLYVTGLSTRVTER LEDHFS+EGKV S FLV+EPR+R+SRGFAF+TM+T EDAN
Sbjct: 55  SNPGNTLYVTGLSTRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDAN 114

Query: 719 RCIKHLNQSVLEGRYIXXXXXXXXXXXXXTPGHYLGLK 606
           RCIKHLNQSVLEGRYI             TPGHYLGLK
Sbjct: 115 RCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLK 152


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