BLASTX nr result

ID: Cephaelis21_contig00002924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002924
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   244   2e-62
ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|1...   234   2e-59
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   232   7e-59
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   231   2e-58
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro...   228   1e-57

>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  244 bits (622), Expect = 2e-62
 Identities = 120/154 (77%), Positives = 134/154 (87%)
 Frame = +2

Query: 98  MAHTLAVPVLPSISLICNVNHSKPTFNSLCFPTSSILPKVGGLSVKCARVGGVEIPNSKR 277
           MA  LA P+ PS+SLICN  +     N+L F T +  PK GGLS+KCARVGGVEIPNSKR
Sbjct: 1   MAQALATPLAPSLSLICNTRNPLSPSNNLSFSTPAP-PKFGGLSIKCARVGGVEIPNSKR 59

Query: 278 IQFSLQYIHGIGRTRAKQILSDLGMENKLTKDFSEDELTTLREEVSKYMIEGDLRRFNAL 457
           +++SLQYIHGIGR+R+KQIL DLGMENK+TKD SE+EL TLR+EVSKYMIEGDLRRFNAL
Sbjct: 60  VEYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNAL 119

Query: 458 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 559
           AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 120 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1|
           unknown [Populus trichocarpa]
           gi|222843982|gb|EEE81529.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  234 bits (596), Expect = 2e-59
 Identities = 116/154 (75%), Positives = 131/154 (85%)
 Frame = +2

Query: 98  MAHTLAVPVLPSISLICNVNHSKPTFNSLCFPTSSILPKVGGLSVKCARVGGVEIPNSKR 277
           MA TLA+PV+PS+S ICN   S    NS+  P S+  PK G LS++CARVGGVEIPNSKR
Sbjct: 1   MAQTLAMPVVPSLSAICNGLKSTSLSNSISLPISNP-PKAGSLSIRCARVGGVEIPNSKR 59

Query: 278 IQFSLQYIHGIGRTRAKQILSDLGMENKLTKDFSEDELTTLREEVSKYMIEGDLRRFNAL 457
           +++SLQYIHGIGR+ A+QILSDL MENK+TKD SE+EL  LR+EVSKY IEGDLRRFNAL
Sbjct: 60  VEYSLQYIHGIGRSNARQILSDLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNAL 119

Query: 458 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 559
            IRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 120 NIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  232 bits (592), Expect = 7e-59
 Identities = 116/154 (75%), Positives = 133/154 (86%)
 Frame = +2

Query: 98  MAHTLAVPVLPSISLICNVNHSKPTFNSLCFPTSSILPKVGGLSVKCARVGGVEIPNSKR 277
           MA TLA+PV+PS+S ICN   +    +S+  P S+  PKV  LS++CARVGGVEIPNSKR
Sbjct: 1   MAQTLAIPVVPSLSAICNGLKNTSLSSSISPPVSNP-PKVCSLSIRCARVGGVEIPNSKR 59

Query: 278 IQFSLQYIHGIGRTRAKQILSDLGMENKLTKDFSEDELTTLREEVSKYMIEGDLRRFNAL 457
           +++SLQYIHGIGR+ A+QILSDL MENK+TKD SEDEL TLR+EVSKYMIEGDLRRFNAL
Sbjct: 60  VEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNAL 119

Query: 458 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 559
            IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 120 NIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 153


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  231 bits (589), Expect = 2e-58
 Identities = 118/156 (75%), Positives = 137/156 (87%), Gaps = 2/156 (1%)
 Frame = +2

Query: 98  MAHTLAVPVLPSISLICNV--NHSKPTFNSLCFPTSSILPKVGGLSVKCARVGGVEIPNS 271
           MA TLA+PV PS+SLICN   N+S  TF SL  P S+  PK+ GLS++CARVGGVEIPN+
Sbjct: 1   MAQTLAMPVAPSLSLICNGWRNNSLSTFVSL--PISNP-PKIHGLSIQCARVGGVEIPNN 57

Query: 272 KRIQFSLQYIHGIGRTRAKQILSDLGMENKLTKDFSEDELTTLREEVSKYMIEGDLRRFN 451
           KR+++SLQYIHG+GR+RA+QILSDL M+NK+TKD SE+EL TLR+EVSKYMIEGDLRRFN
Sbjct: 58  KRVEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFN 117

Query: 452 ALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 559
           AL IR LKEIQC+RGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 118 ALNIRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
           sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
           ribosomal protein S13, chloroplastic-like [Cucumis
           sativus]
          Length = 167

 Score =  228 bits (581), Expect = 1e-57
 Identities = 111/154 (72%), Positives = 130/154 (84%)
 Frame = +2

Query: 98  MAHTLAVPVLPSISLICNVNHSKPTFNSLCFPTSSILPKVGGLSVKCARVGGVEIPNSKR 277
           MA T A+P+  S+SLI N  +  P  N+L FP S+  P+V GL +KC RVGGVEIPN+KR
Sbjct: 1   MAQTSAIPLAHSLSLISNSRNFNPLSNTLSFPISN--PQVRGLQIKCVRVGGVEIPNNKR 58

Query: 278 IQFSLQYIHGIGRTRAKQILSDLGMENKLTKDFSEDELTTLREEVSKYMIEGDLRRFNAL 457
           +Q+SLQY+HGIGR  AK+IL DL +ENK+TKD SE+EL ++R+EVSKYMIEGDLRRFNAL
Sbjct: 59  VQYSLQYVHGIGRNNAKKILFDLNVENKITKDLSEEELISIRDEVSKYMIEGDLRRFNAL 118

Query: 458 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 559
           AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 119 AIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 152


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