BLASTX nr result

ID: Cephaelis21_contig00002438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002438
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    58   5e-06
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...    58   7e-06

>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
 Frame = -3

Query: 826 VLHNTGNSTLDEFKVWFKLDKSSRKEIDAWIERAFARGVS-LELNF-SIGVNVVPIYPYM 653
           VL +    T++  ++ F LD     EID+WI  A  + V  LE++  +I  ++     Y 
Sbjct: 110 VLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKRVKRLEIDLTNIEPSIKTTGSYA 169

Query: 652 FPDQLLSSGYGDPYSHSSLTHQNANASIDFNSLKELTLKAVDVTSETIRLFLLKF-PFLE 476
           FP  LL+                      F+SLK L L  VDVT E ++  LL + P LE
Sbjct: 170 FPSGLLNDS-------------------SFSSLKTLQLNMVDVTGEALQHLLLSWCPLLE 210

Query: 475 RL*VSCAVTSVRLVVSDPSLLLKYLEI 395
            L +  + + V L VS  SL LKYLE+
Sbjct: 211 VLSIVNSTSLVSLKVSGSSLKLKYLEM 237


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 457

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 50/144 (34%), Positives = 69/144 (47%)
 Frame = -3

Query: 826 VLHNTGNSTLDEFKVWFKLDKSSRKEIDAWIERAFARGVSLELNFSIGVNVVPIYPYMFP 647
           VL    +S LDEF V F L  +SR+ +D W+  A ++ +       I +       + F 
Sbjct: 94  VLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTLK---RLEISLAPFSSRKFRFH 150

Query: 646 DQLLSSGYGDPYSHSSLTHQNANASIDFNSLKELTLKAVDVTSETIRLFLLKFPFLERL* 467
           D+  S    D YS        +N S    SL+ L L+ V++T E +  FLL  P LE+L 
Sbjct: 151 DECYSFPV-DCYSFIRGPEGLSNIS----SLRSLCLRYVNMTGEVVEHFLLNCPLLEQLT 205

Query: 466 VSCAVTSVRLVVSDPSLLLKYLEI 395
           V+ A     L V   SL LKYLEI
Sbjct: 206 VAVAYRLESLKVPASSLRLKYLEI 229


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