BLASTX nr result

ID: Cephaelis21_contig00002352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002352
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isofo...   237   3e-60
ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   233   4e-59
ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like ...   233   5e-59
ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago trunca...   233   5e-59
ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like ...   233   7e-59

>ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isoform 1 [Vitis vinifera]
           gi|359490182|ref|XP_003634047.1| PREDICTED: 40S
           ribosomal protein S20-2 isoform 2 [Vitis vinifera]
           gi|147777804|emb|CAN62522.1| hypothetical protein
           VITISV_002374 [Vitis vinifera]
          Length = 122

 Score =  237 bits (605), Expect = 3e-60
 Identities = 119/122 (97%), Positives = 119/122 (97%)
 Frame = -3

Query: 791 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 612
           MAYAAMKPTKPGLEE QE IHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 611 TKVLHITTRKSPCGEGTNTWDTFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 432
           TKVLHITTRKSPCGEGTNTWD FELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 431 DS 426
           DS
Sbjct: 121 DS 122


>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  233 bits (595), Expect = 4e-59
 Identities = 116/122 (95%), Positives = 120/122 (98%)
 Frame = -3

Query: 791 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 612
           MAYAAMKPTKPGLEE+QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 611 TKVLHITTRKSPCGEGTNTWDTFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 432
           TKVL+ITTRKSPCGEGTNTWD FELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 431 DS 426
           D+
Sbjct: 121 DA 122


>ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like [Cucumis sativus]
           gi|449488600|ref|XP_004158106.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Cucumis sativus]
          Length = 121

 Score =  233 bits (594), Expect = 5e-59
 Identities = 117/121 (96%), Positives = 119/121 (98%)
 Frame = -3

Query: 791 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 612
           MAYAAMKPTKPGLE+AQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 611 TKVLHITTRKSPCGEGTNTWDTFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 432
           TKVL+ITTRKSPCGEGTNTWD FELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 120

Query: 431 D 429
           D
Sbjct: 121 D 121


>ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|124360667|gb|ABN08656.1| Ribosomal protein S10,
           eukaryotic and archaeal form [Medicago truncatula]
           gi|355500231|gb|AES81434.1| 40S ribosomal protein S20-2
           [Medicago truncatula]
          Length = 122

 Score =  233 bits (594), Expect = 5e-59
 Identities = 115/122 (94%), Positives = 120/122 (98%)
 Frame = -3

Query: 791 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 612
           MAYAAMKPTKPGLEE+QEQIHKIRITLSSK+VKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 611 TKVLHITTRKSPCGEGTNTWDTFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 432
           TKVLHITTRK+PCGEGTNTWD FELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 431 DS 426
           D+
Sbjct: 121 DA 122


>ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like [Glycine max]
          Length = 123

 Score =  233 bits (593), Expect = 7e-59
 Identities = 115/120 (95%), Positives = 119/120 (99%)
 Frame = -3

Query: 785 YAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTK 606
           YAAMKPTKPGLEE+QEQIHKIRITLSSK+VKNLEKVCADLVRGAKDKRLRVKGPVRMPTK
Sbjct: 4   YAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTK 63

Query: 605 VLHITTRKSPCGEGTNTWDTFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 426
           VLHITTRKSPCGEGTNTWD FELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct: 64  VLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123


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