BLASTX nr result

ID: Cephaelis21_contig00002286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002286
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             125   4e-27
gb|AAM22011.1|AC093178_6 Putative gag-pol precursor [Oryza sativ...   123   1e-26
gb|AAR96234.1| putative polyprotein [Oryza sativa Japonica Group...   123   1e-26
emb|CAE04320.1| OSJNBb0016D16.11 [Oryza sativa Japonica Group]        123   1e-26
emb|CAE02180.2| OSJNBa0080E14.11 [Oryza sativa Japonica Group]        123   1e-26

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/96 (60%), Positives = 67/96 (69%)
 Frame = -3

Query: 288  KVFAWEPEDMPGVSPDIIVHRLNISSQVKPVQQKRRNFTPERSRAIIEEVRKLWKTDILK 109
            K FAW  EDM G+ P I  H LN+    KPV+QKRR   PER+RA+ EEV KL K   + 
Sbjct: 795  KTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQII 854

Query: 108  EVHYPTWLANPVLVKKPDKSWRMCVDYTDLNKYCPK 1
            EV YP WLANPV+VKK +  WR+CVDYTDLNK CPK
Sbjct: 855  EVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPK 890


>gb|AAM22011.1|AC093178_6 Putative gag-pol precursor [Oryza sativa Japonica Group]
            gi|31430828|gb|AAP52687.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1933

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = -3

Query: 291  KKVFAWEPEDMPGVSPDIIVHRLNISSQVKPVQQKRRNFTPERSRAIIEEVRKLWKTDIL 112
            K +FAW+P DMPG+  ++I H L++    KP++Q+ R F  +R  AI EE+ KL     +
Sbjct: 976  KDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFI 1035

Query: 111  KEVHYPTWLANPVLVKKPDKSWRMCVDYTDLNKYCPK 1
            KEVH+P WLANPVLV+K    WRMCVDYTDLNK CPK
Sbjct: 1036 KEVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPK 1072


>gb|AAR96234.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708469|gb|ABF96264.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2004

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = -3

Query: 291  KKVFAWEPEDMPGVSPDIIVHRLNISSQVKPVQQKRRNFTPERSRAIIEEVRKLWKTDIL 112
            K +FAW+P DMPG+  ++I H L++    KP++Q+ R F  +R  AI EE+ KL     +
Sbjct: 976  KDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFI 1035

Query: 111  KEVHYPTWLANPVLVKKPDKSWRMCVDYTDLNKYCPK 1
            KEVH+P WLANPVLV+K    WRMCVDYTDLNK CPK
Sbjct: 1036 KEVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPK 1072


>emb|CAE04320.1| OSJNBb0016D16.11 [Oryza sativa Japonica Group]
          Length = 1748

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = -3

Query: 291  KKVFAWEPEDMPGVSPDIIVHRLNISSQVKPVQQKRRNFTPERSRAIIEEVRKLWKTDIL 112
            K +FAW+P DMPG+  ++I H L++    KP++Q+ R F  +R  AI EE+ KL     +
Sbjct: 976  KDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFI 1035

Query: 111  KEVHYPTWLANPVLVKKPDKSWRMCVDYTDLNKYCPK 1
            KEVH+P WLANPVLV+K    WRMCVDYTDLNK CPK
Sbjct: 1036 KEVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPK 1072


>emb|CAE02180.2| OSJNBa0080E14.11 [Oryza sativa Japonica Group]
          Length = 2001

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = -3

Query: 291  KKVFAWEPEDMPGVSPDIIVHRLNISSQVKPVQQKRRNFTPERSRAIIEEVRKLWKTDIL 112
            K +FAW+P DMPG+  ++I H L++    KP++Q+ R F  +R  AI EE+ KL     +
Sbjct: 976  KDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFI 1035

Query: 111  KEVHYPTWLANPVLVKKPDKSWRMCVDYTDLNKYCPK 1
            KEVH+P WLANPVLV+K    WRMCVDYTDLNK CPK
Sbjct: 1036 KEVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPK 1072


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