BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002241
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    63   1e-14
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    53   2e-14
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    55   6e-14
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    50   4e-13
ref|XP_002459403.1| hypothetical protein SORBIDRAFT_02g004125 [S...    46   2e-10

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 62.8 bits (151), Expect(2) = 1e-14
 Identities = 29/82 (35%), Positives = 46/82 (56%)
 Frame = -1

Query: 256 GGQLILIRHVL*PMSMHILSTMDPPKGILKQLEQIFSNFFWGSVMGESQRVLCAWNTLAY 77
           GG+++LI+HVL  +  H+L  + P KG L  +E   + FFW S     +    AW TL  
Sbjct: 708 GGRVVLIKHVLLAIPTHLLVALQPTKGTLDNIEIYLARFFWSSKEEGGKHHWIAWRTLCL 767

Query: 76  PIQENRLGVQRLVDIYAAFTCK 11
           P +E  + ++R+ D+  AF+ K
Sbjct: 768 PFEEGWINIRRIGDVCNAFSYK 789



 Score = 41.6 bits (96), Expect(2) = 1e-14
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -3

Query: 377 PIFYLGGFLY*GRKKRVHYESLVEKIKQRVAGWKGNFLSIGGPI 246
           PI YLG  L  G+KK  H+  LV+ I  R+ GW    LS GG +
Sbjct: 668 PIKYLGCPLISGKKKTSHFNELVKNIINRIKGWHNKLLSTGGRV 711


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 53.1 bits (126), Expect(2) = 2e-14
 Identities = 24/73 (32%), Positives = 43/73 (58%)
 Frame = -3

Query: 464 RKSHCVSNRCSEAKYRVLSHILGIKK*TLPIFYLGGFLY*GRKKRVHYESLVEKIKQRVA 285
           RKS   +   ++ +   + +ILG    +LP  YLG  ++ G+ K +H++ + +K+K ++A
Sbjct: 464 RKSFIFAGGITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLA 523

Query: 284 GWKGNFLSIGGPI 246
            WK + LSI G I
Sbjct: 524 KWKASLLSIAGRI 536



 Score = 50.8 bits (120), Expect(2) = 2e-14
 Identities = 25/86 (29%), Positives = 45/86 (52%)
 Frame = -1

Query: 259 LGGQLILIRHVL*PMSMHILSTMDPPKGILKQLEQIFSNFFWGSVMGESQRVLCAWNTLA 80
           + G++ L++ V+  M +H +S    P  ILK++E+   NF W   + + + V  AW  + 
Sbjct: 532 IAGRIQLVKSVVQSMLVHTMSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKIC 591

Query: 79  YPIQENRLGVQRLVDIYAAFTCKMWW 2
              +E  LGV+ L+ +  A   K+ W
Sbjct: 592 ADYEEGGLGVKSLICLNEATNLKICW 617


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 55.5 bits (132), Expect(2) = 6e-14
 Identities = 28/86 (32%), Positives = 45/86 (52%)
 Frame = -1

Query: 259 LGGQLILIRHVL*PMSMHILSTMDPPKGILKQLEQIFSNFFWGSVMGESQRVLCAWNTLA 80
           + G++ LI+ V   M +H ++  D P  +LK+LE  F NF W   + + + V  AW  L 
Sbjct: 438 IAGRVQLIKSVAQSMLIHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLC 497

Query: 79  YPIQENRLGVQRLVDIYAAFTCKMWW 2
            P  +  LG++ L  + AA   K+ W
Sbjct: 498 KPQSQGGLGIRSLSQLNAAGNLKLCW 523



 Score = 46.6 bits (109), Expect(2) = 6e-14
 Identities = 21/63 (33%), Positives = 39/63 (61%)
 Frame = -3

Query: 434 SEAKYRVLSHILGIKK*TLPIFYLGGFLY*GRKKRVHYESLVEKIKQRVAGWKGNFLSIG 255
           S+A+ + L +++G  K + P  YLG  ++ G+ K    + +V+KIK +++ WK + LSI 
Sbjct: 380 SDARLQQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASILSIA 439

Query: 254 GPI 246
           G +
Sbjct: 440 GRV 442


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 50.4 bits (119), Expect(2) = 4e-13
 Identities = 22/86 (25%), Positives = 43/86 (50%)
 Frame = -1

Query: 259 LGGQLILIRHVL*PMSMHILSTMDPPKGILKQLEQIFSNFFWGSVMGESQRVLCAWNTLA 80
           + G++ +++ V+  M  H ++  + P  +LK LE+   NF W     + + V  AW  L 
Sbjct: 73  IAGRVQMVKSVIQSMLTHSITVYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLC 132

Query: 79  YPIQENRLGVQRLVDIYAAFTCKMWW 2
            P  +  L ++ L+ + +A   K+ W
Sbjct: 133 RPFDQGGLRIRSLIQLNSASNLKLCW 158



 Score = 48.9 bits (115), Expect(2) = 4e-13
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = -3

Query: 461 KSHCVSNRCSEAKYRVLSHILGIKK*TLPIFYLGGFLY*GRKKRVHYESLVEKIKQRVAG 282
           KS   +   S +K   L +I+G    TLP  YLG  ++ G+ K +H + +V+KI  +++ 
Sbjct: 6   KSTVFAGSISVSKLNQLINIIGFNHGTLPFTYLGVPIFKGKPKVIHLQPIVDKIIAKLST 65

Query: 281 WKGNFLSIGGPI 246
           WK + LSI G +
Sbjct: 66  WKASLLSIAGRV 77


>ref|XP_002459403.1| hypothetical protein SORBIDRAFT_02g004125 [Sorghum bicolor]
           gi|241922780|gb|EER95924.1| hypothetical protein
           SORBIDRAFT_02g004125 [Sorghum bicolor]
          Length = 358

 Score = 45.8 bits (107), Expect(2) = 2e-10
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -1

Query: 253 GQLILIRHVL*PMSMHILSTMDPPKGILKQLEQIFSNFFW-GSVMGESQRVLCAWNTLAY 77
           G+  L R VL  M +++L+T+ PPK +L+ +++I   F W G +     +   AW+++A 
Sbjct: 129 GRRELTRSVLSAMPVYLLTTLRPPKQLLQDIDKIRRRFMWAGDLELTGGKCKVAWSSVAK 188

Query: 76  PIQENRLGVQRLVDIYAAFTCKMWW 2
           PI+   LG+  L     A   +  W
Sbjct: 189 PIEFGGLGLIELEKFSRALRLRWLW 213



 Score = 43.9 bits (102), Expect(2) = 2e-10
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
 Frame = -3

Query: 476 ASIGRKSHCVSNRCSEAKYR--------VLSHILGIKK*TLPIFYLGGFLY*GRKKRVHY 321
           +++ + ++C+S +C  A  R        +L +  G ++ T P+ YLG  L  GR K  H 
Sbjct: 48  SAVTKGNYCLSMQCLVAPIRCAGMNLDDILENFAG-RRVTFPLTYLGLPLTLGRLKVAHV 106

Query: 320 ESLVEKIKQRVAGWKGNFLSIGG 252
           +  V+K + ++AGW+G  L+  G
Sbjct: 107 QGFVDKSRSKLAGWQGRLLNQAG 129