BLASTX nr result

ID: Cephaelis21_contig00002072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002072
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...   106   1e-20
gb|ABR17957.1| unknown [Picea sitchensis]                             104   4e-20
ref|XP_001771167.1| predicted protein [Physcomitrella patens sub...   103   7e-20
ref|XP_001761556.1| predicted protein [Physcomitrella patens sub...   102   2e-19
ref|XP_001772615.1| predicted protein [Physcomitrella patens sub...   101   2e-19

>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score =  106 bits (264), Expect = 1e-20
 Identities = 56/113 (49%), Positives = 65/113 (57%)
 Frame = +3

Query: 114 MSVSELGCTLAALILHDDGIPITAEKIAALVKAANLTVESYWPSLFAKLCDKRNIEDLIL 293
           MSV EL C+ A ++LHDDGIPITAEKIA LVKAAN+ +ESYWPSLFAKL +KRNIEDL++
Sbjct: 1   MSVGELACSYAVMVLHDDGIPITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVM 60

Query: 294 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEDMGFSLFD 452
           N                                         SD+DMGFSLFD
Sbjct: 61  NVGSGGGGAPVAVAAPAGGAAAGGAAAAAPPPEEKKEEPQEESDDDMGFSLFD 113


>gb|ABR17957.1| unknown [Picea sitchensis]
          Length = 113

 Score =  104 bits (259), Expect = 4e-20
 Identities = 57/113 (50%), Positives = 64/113 (56%)
 Frame = +3

Query: 114 MSVSELGCTLAALILHDDGIPITAEKIAALVKAANLTVESYWPSLFAKLCDKRNIEDLIL 293
           MSVSE+ CT AAL+LHDD IPITAEKI+ LVKAAN+ +ESYWP LFAKL +KRNIEDLI 
Sbjct: 1   MSVSEVACTYAALVLHDDNIPITAEKISTLVKAANVQIESYWPGLFAKLMEKRNIEDLIS 60

Query: 294 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEDMGFSLFD 452
           N                                         SD+DMGFSLFD
Sbjct: 61  NVGSGGGGASAAVAVAPSGGAGAPAAAAAPAAEEKKEEPKEESDDDMGFSLFD 113


>ref|XP_001771167.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677547|gb|EDQ64016.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 110

 Score =  103 bits (257), Expect = 7e-20
 Identities = 58/113 (51%), Positives = 66/113 (58%)
 Frame = +3

Query: 114 MSVSELGCTLAALILHDDGIPITAEKIAALVKAANLTVESYWPSLFAKLCDKRNIEDLIL 293
           MS+SE+ CT A LILHDDGI ITA+KIAALVKAAN++VE YWPSLFAKLC+KR++EDLI 
Sbjct: 1   MSISEVACTYACLILHDDGIAITADKIAALVKAANVSVEGYWPSLFAKLCEKRSVEDLIT 60

Query: 294 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEDMGFSLFD 452
           N                                         SDEDMGFSLFD
Sbjct: 61  N---VGGGGGGAVAMSAAPAAGGAAAAVEAPKEVEKEEPKEESDEDMGFSLFD 110


>ref|XP_001761556.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687240|gb|EDQ73624.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 107

 Score =  102 bits (253), Expect = 2e-19
 Identities = 56/113 (49%), Positives = 66/113 (58%)
 Frame = +3

Query: 114 MSVSELGCTLAALILHDDGIPITAEKIAALVKAANLTVESYWPSLFAKLCDKRNIEDLIL 293
           MS+SEL CT A LILHDDGI ITA+KIAALVKAAN++VE YWPSLFAKLC+KR+++DL+ 
Sbjct: 1   MSISELACTYACLILHDDGIAITADKIAALVKAANVSVEGYWPSLFAKLCEKRSVDDLVT 60

Query: 294 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEDMGFSLFD 452
           N                                         SD+DMGFSLFD
Sbjct: 61  N------VGGGGGAVAVSAAPAASAAVEAPKEEEKKEEPKEESDDDMGFSLFD 107


>ref|XP_001772615.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676170|gb|EDQ62657.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 110

 Score =  101 bits (252), Expect = 2e-19
 Identities = 57/113 (50%), Positives = 66/113 (58%)
 Frame = +3

Query: 114 MSVSELGCTLAALILHDDGIPITAEKIAALVKAANLTVESYWPSLFAKLCDKRNIEDLIL 293
           MSVSEL CT A LILHDDGI ITA+KIA+LVKAAN++VE YWPSLFAKLC+KR+++DLI 
Sbjct: 1   MSVSELACTYACLILHDDGIAITADKIASLVKAANVSVEGYWPSLFAKLCEKRSVDDLIT 60

Query: 294 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDEDMGFSLFD 452
           N                                         SD+DMGFSLFD
Sbjct: 61  N---VGGGKCGGAAVAVSAAPASSAADEAPQVEEKKEEPKEESDDDMGFSLFD 110


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