BLASTX nr result

ID: Cephaelis21_contig00002037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002037
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   260   5e-67
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   256   7e-66
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   254   5e-65
ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   250   5e-64
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   246   1e-62

>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
            gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
            putative [Ricinus communis]
          Length = 309

 Score =  260 bits (665), Expect = 5e-67
 Identities = 142/248 (57%), Positives = 163/248 (65%), Gaps = 7/248 (2%)
 Frame = +2

Query: 290  DIDTTFFDNVDPEDIDTXXXXXXXXXXXXXXXXXKLPMXXXXXXXXXXXXLYGPAYSGES 469
            DIDTTFFDN++PED                    + PM            LYG  YSG S
Sbjct: 62   DIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGYSGVS 121

Query: 470  YLGNDVYAMD-RVTKTTGFG------RVREEFDEKIXXXXXXXXXXXXXXXLSFRAVVIX 628
            YLGNDVY MD +V KTTGFG      ++R+ F+E++               L FRA+V+ 
Sbjct: 122  YLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVV 181

Query: 629  XXXXXXXXXXXXXXXEIAAAVTKSAADARRHIVTVPMTKYLTFPHRADGDYGAAKVMLRP 808
                           E+ AAV KSA +ARR+I+TVPMTKYLTFPHR+DGDYGAAKVMLRP
Sbjct: 182  GDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKVMLRP 241

Query: 809  ASPGSGVIAGGTVRIVLELAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAERRG 988
            ASPG+GVIAGG VRIVLE+AGVENALGKQ+GS NALNNARATVVAVQKMRQFS+VA  RG
Sbjct: 242  ASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVARERG 301

Query: 989  IPMEELWK 1012
            IPMEELWK
Sbjct: 302  IPMEELWK 309


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 300

 Score =  256 bits (655), Expect = 7e-66
 Identities = 142/248 (57%), Positives = 162/248 (65%), Gaps = 7/248 (2%)
 Frame = +2

Query: 290  DIDTTFFDNVDPEDIDTXXXXXXXXXXXXXXXXXKLPMXXXXXXXXXXXXLYGPAYSGES 469
            DIDT+FFDN++P+D  T                   P+            LYGP YSG S
Sbjct: 53   DIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGVS 112

Query: 470  YLGNDVYAMD-RVTKTTGFG------RVREEFDEKIXXXXXXXXXXXXXXXLSFRAVVIX 628
             LGNDVY MD +V K TGFG      +VR+ F+E++               L FRAVV+ 
Sbjct: 113  VLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVVVV 172

Query: 629  XXXXXXXXXXXXXXXEIAAAVTKSAADARRHIVTVPMTKYLTFPHRADGDYGAAKVMLRP 808
                           E+ AAV KSA +ARR+I+ VPMTKY TFPHRADGDYGAAKVMLRP
Sbjct: 173  GDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVMLRP 232

Query: 809  ASPGSGVIAGGTVRIVLELAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAERRG 988
            ASPG+GVIAGG+VRIVLE+AGVENALGKQLGSNNALNNARATVVAVQKM+QF EVAE RG
Sbjct: 233  ASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEERG 292

Query: 989  IPMEELWK 1012
            IPMEELWK
Sbjct: 293  IPMEELWK 300


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 316

 Score =  254 bits (648), Expect = 5e-65
 Identities = 140/248 (56%), Positives = 161/248 (64%), Gaps = 7/248 (2%)
 Frame = +2

Query: 290  DIDTTFFDNVDPEDIDTXXXXXXXXXXXXXXXXXKLPMXXXXXXXXXXXXLYGPAYSGES 469
            DIDT+FFDN++P+D  T                   P+            LYGP YSG S
Sbjct: 69   DIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGVS 128

Query: 470  YLGNDVYAMD-RVTKTTGFG------RVREEFDEKIXXXXXXXXXXXXXXXLSFRAVVIX 628
             LGNDVY MD +V K TGFG      +VR+ F+E++               L FRAVV+ 
Sbjct: 129  VLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVVVV 188

Query: 629  XXXXXXXXXXXXXXXEIAAAVTKSAADARRHIVTVPMTKYLTFPHRADGDYGAAKVMLRP 808
                           E+ AAV KSA +ARR+I+ VPMTKY TFPHRADGDYGAAKVMLRP
Sbjct: 189  GDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVMLRP 248

Query: 809  ASPGSGVIAGGTVRIVLELAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAERRG 988
            ASPG+GVIAGG+VRIVLE+AGV+NALGKQLGSNNALNNARATV AVQKM+QF EVAE RG
Sbjct: 249  ASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAAVQKMKQFREVAEERG 308

Query: 989  IPMEELWK 1012
            IPMEELWK
Sbjct: 309  IPMEELWK 316


>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
            sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
            ribosomal protein S5, chloroplastic-like [Cucumis
            sativus]
          Length = 307

 Score =  250 bits (639), Expect = 5e-64
 Identities = 137/248 (55%), Positives = 161/248 (64%), Gaps = 7/248 (2%)
 Frame = +2

Query: 290  DIDTTFFDNVDPEDIDTXXXXXXXXXXXXXXXXXKLPMXXXXXXXXXXXXLYGPAYSGES 469
            DIDTTFFDNV+P++                    + P+            +YGPAYSG S
Sbjct: 60   DIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVS 119

Query: 470  YLGNDVYAMD-RVTKTTGFG------RVREEFDEKIXXXXXXXXXXXXXXXLSFRAVVIX 628
             LGND+Y MD +V K  GFG      + R+ FDE++               L FRA+V+ 
Sbjct: 120  VLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVV 179

Query: 629  XXXXXXXXXXXXXXXEIAAAVTKSAADARRHIVTVPMTKYLTFPHRADGDYGAAKVMLRP 808
                           E+  AV KSA +ARR+IVTVPMTKYLTFPHR++GDYGAAKVMLRP
Sbjct: 180  GDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRP 239

Query: 809  ASPGSGVIAGGTVRIVLELAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAERRG 988
            ASPG+GVIAGG VRIVLE+AGVENALGKQLGSNNALNNARATVVAVQKM+QF +VA+ RG
Sbjct: 240  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG 299

Query: 989  IPMEELWK 1012
            IPMEELWK
Sbjct: 300  IPMEELWK 307


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
            unknown [Populus trichocarpa] gi|222848093|gb|EEE85640.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  246 bits (627), Expect = 1e-62
 Identities = 136/248 (54%), Positives = 161/248 (64%), Gaps = 7/248 (2%)
 Frame = +2

Query: 290  DIDTTFFDNVDPEDIDTXXXXXXXXXXXXXXXXXKLPMXXXXXXXXXXXXLYGPAYSGES 469
            DIDT+FFDN++PE+                    + P+            LYGPAYSG S
Sbjct: 64   DIDTSFFDNLNPEEEFVYDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPAYSGVS 123

Query: 470  YLGNDVYAMD-RVTKTTGFG------RVREEFDEKIXXXXXXXXXXXXXXXLSFRAVVIX 628
             LG D+Y MD +V KT+G+G      ++++ FDE++               L FRAVVI 
Sbjct: 124  VLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFRAVVIV 183

Query: 629  XXXXXXXXXXXXXXXEIAAAVTKSAADARRHIVTVPMTKYLTFPHRADGDYGAAKVMLRP 808
                           E+  AV KSA +ARR+I+TVPMTKYLTFPHR++GD+GAAKVMLRP
Sbjct: 184  GDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAKVMLRP 243

Query: 809  ASPGSGVIAGGTVRIVLELAGVENALGKQLGSNNALNNARATVVAVQKMRQFSEVAERRG 988
            ASPG+GVIAGG VRIVLE+AGVENALGKQL S NALNNARATVVAVQKMRQFSEVA  RG
Sbjct: 244  ASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEVARERG 303

Query: 989  IPMEELWK 1012
            IPMEELWK
Sbjct: 304  IPMEELWK 311


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