BLASTX nr result

ID: Cephaelis21_contig00002031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002031
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea ma...   179   2e-42
ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [S...   177   4e-42
gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50...   177   5e-42
gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea br...   176   2e-41
ref|NP_567861.1| 50S ribosomal protein L21 [Arabidopsis thaliana...   174   3e-41

>ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea mays]
           gi|195635625|gb|ACG37281.1| 50S ribosomal protein L21
           [Zea mays]
          Length = 250

 Score =  179 bits (453), Expect = 2e-42
 Identities = 90/148 (60%), Positives = 105/148 (70%)
 Frame = +3

Query: 348 SGKTDXXXXXXXXXIGYKVLGPLQESDRVFKPYEPVFAVVQVGSHQFKVSNGDSIFVEKL 527
           SGKT+         IGYKVLGPL+  D+ FKPYEPVFAVVQ+GSHQFKVSNGDSIF E+L
Sbjct: 101 SGKTEEEKVAEAAEIGYKVLGPLEADDKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERL 160

Query: 528 KYCDVNDKLILNRVLLLGSKTQTIIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXX 707
           K+CDVNDKL+LNRVL+LGS+ QT+IGRPILPD           LDAKVIIF         
Sbjct: 161 KFCDVNDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYR 220

Query: 708 XXXXXXQELTKLRITDMQGIEKPEVLPI 791
                 QELTKLRIT+++GI+KPE   +
Sbjct: 221 RTKGHRQELTKLRITNIEGIDKPEAAAV 248


>ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
           gi|241946786|gb|EES19931.1| hypothetical protein
           SORBIDRAFT_09g028120 [Sorghum bicolor]
          Length = 250

 Score =  177 bits (450), Expect = 4e-42
 Identities = 90/148 (60%), Positives = 105/148 (70%)
 Frame = +3

Query: 348 SGKTDXXXXXXXXXIGYKVLGPLQESDRVFKPYEPVFAVVQVGSHQFKVSNGDSIFVEKL 527
           SGKT+         IGYKVLGPL   ++ FKPYEPVFAVVQ+GSHQFKVSNGDSIF E+L
Sbjct: 101 SGKTEEEKVAEAAEIGYKVLGPLGADEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERL 160

Query: 528 KYCDVNDKLILNRVLLLGSKTQTIIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXX 707
           K+CDVNDKL+LNRVL+LGS+TQT+IGRPILPD           LDAKVIIF         
Sbjct: 161 KFCDVNDKLVLNRVLMLGSQTQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYR 220

Query: 708 XXXXXXQELTKLRITDMQGIEKPEVLPI 791
                 QELTKLRIT+++GI+KPE   +
Sbjct: 221 RTKGHRQELTKLRITNIEGIDKPETAAV 248


>gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50S ribosomal
           protein L21 [Zea mays]
          Length = 250

 Score =  177 bits (449), Expect = 5e-42
 Identities = 90/148 (60%), Positives = 104/148 (70%)
 Frame = +3

Query: 348 SGKTDXXXXXXXXXIGYKVLGPLQESDRVFKPYEPVFAVVQVGSHQFKVSNGDSIFVEKL 527
           SGKT+         IGYKVLGPL   D+ FKPYEPVFAVVQ+GSHQFKVSNGDSIF E+L
Sbjct: 101 SGKTEEEKVAEAAEIGYKVLGPLGADDKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERL 160

Query: 528 KYCDVNDKLILNRVLLLGSKTQTIIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXX 707
           K+CDVNDKL+LNRVL+LGS+ QT+IGRPILPD           LDAKVIIF         
Sbjct: 161 KFCDVNDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYR 220

Query: 708 XXXXXXQELTKLRITDMQGIEKPEVLPI 791
                 QELTKLRIT+++GI+KPE   +
Sbjct: 221 RTKGHRQELTKLRITNIEGIDKPEAAAV 248


>gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
          Length = 271

 Score =  176 bits (445), Expect = 2e-41
 Identities = 91/146 (62%), Positives = 104/146 (71%)
 Frame = +3

Query: 390 IGYKVLGPLQESDRVFKPYEPVFAVVQVGSHQFKVSNGDSIFVEKLKYCDVNDKLILNRV 569
           IGYKV+GPLQ+SD VFKPYEPVFAVVQ+GSHQFKVSNGD IF EKLK+C+VNDKLILN+V
Sbjct: 120 IGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQFKVSNGDCIFTEKLKFCEVNDKLILNKV 179

Query: 570 LLLGSKTQTIIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXXXXQELTKLRI 749
           LLLGS +QTI+GRP +PD           LDAK IIF               QELTKLRI
Sbjct: 180 LLLGSSSQTIVGRPTVPDAAVHAVVEEHALDAKAIIFKKKRRKNYRRTKGHRQELTKLRI 239

Query: 750 TDMQGIEKPEVLPIMKTEKKAAKKLE 827
           TD+QGIEKPE+    K +    K+ E
Sbjct: 240 TDIQGIEKPEMKVDPKPKMSGVKQQE 265


>ref|NP_567861.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
           gi|29839556|sp|Q8L9A0.1|RM21_ARATH RecName: Full=50S
           ribosomal protein L21, mitochondrial; Flags: Precursor
           gi|12641613|emb|CAC27453.1| putative ribosomal protein
           L21 [Arabidopsis thaliana] gi|21595368|gb|AAM66095.1|
           unknown [Arabidopsis thaliana]
           gi|29028852|gb|AAO64805.1| At4g30930 [Arabidopsis
           thaliana] gi|110736393|dbj|BAF00165.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|225898835|dbj|BAH30548.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660431|gb|AEE85831.1| 50S
           ribosomal protein L21 [Arabidopsis thaliana]
          Length = 270

 Score =  174 bits (442), Expect = 3e-41
 Identities = 89/141 (63%), Positives = 103/141 (73%)
 Frame = +3

Query: 390 IGYKVLGPLQESDRVFKPYEPVFAVVQVGSHQFKVSNGDSIFVEKLKYCDVNDKLILNRV 569
           IGYKV+GPL+ S+R+FKPYEPVFA+VQ+GSHQFKVSNGDSIF EKLK+CD+NDKL L +V
Sbjct: 119 IGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKV 178

Query: 570 LLLGSKTQTIIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXXXXQELTKLRI 749
           LLLGS +QTIIGRPILPD           LD KV+IF               QELTKLRI
Sbjct: 179 LLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRI 238

Query: 750 TDMQGIEKPEVLPIMKTEKKA 812
           TD+QGIEKPE   + K  K+A
Sbjct: 239 TDIQGIEKPEPKIVHKPSKEA 259


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