BLASTX nr result

ID: Cephaelis21_contig00001718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001718
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40355.1| ribonuclease T2 [Solanum lycopersicum]                345   1e-92
ref|NP_001234551.1| intracellular ribonuclease LX precursor [Sol...   345   1e-92
dbj|BAA84469.1| RNase NGR3 [Nicotiana glutinosa] gi|31620998|dbj...   340   3e-91
pdb|1VCZ|A Chain A, Crystal Structure Of The Rnase Nt In Complex...   328   1e-87
ref|NP_001238449.1| uncharacterized protein LOC100305644 precurs...   317   3e-84

>emb|CAB40355.1| ribonuclease T2 [Solanum lycopersicum]
          Length = 233

 Score =  345 bits (885), Expect = 1e-92
 Identities = 156/222 (70%), Positives = 183/222 (82%), Gaps = 3/222 (1%)
 Frame = -1

Query: 922 VLVLQCLTILCSAQXXXXXFYFVQQWPASYCDTQRSCCYPTTGKPAEDFSIHGLWPNRND 743
           ++V+QCL +LC        FYFVQQWPASYCDT+RSCCYPTTGKP EDFSIHGLWPN  D
Sbjct: 12  IIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYKD 71

Query: 742 GSWPSDCDRDSSFDESEVSDLINRMQRDWPSLACPSSDGVRFWTHEWEKHGTCSLLKQRQ 563
           G WP +CDR+SS DESE SDLI+ M+++WPSLACPSSDG++FW+HEW KHGTCS L Q  
Sbjct: 72  GKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCSALNQHA 131

Query: 562 YFQTALDLKRRSNLLQVLRDAGITP--GKFYGLESIKEAIKNGVGYTPFIECNVDESHNH 389
           YFQTALD K +SNLLQ L +AGI P  G +YG+ESIK+AI+ GVG+TPFIECNVD   NH
Sbjct: 132 YFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNH 191

Query: 388 QLYQVYLCVDSSASDFIECPVFPH-GRCGREIEFPPFSSSRD 266
           QLYQVYLCVDSSAS FI+CP+FPH G+CG +IEFP FS++ D
Sbjct: 192 QLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSFSTNDD 233


>ref|NP_001234551.1| intracellular ribonuclease LX precursor [Solanum lycopersicum]
           gi|1710616|sp|P80196.2|RNLX_SOLLC RecName:
           Full=Intracellular ribonuclease LX; Short=RNase LX;
           Flags: Precursor gi|895857|emb|CAA55896.1| ribonuclease
           [Solanum lycopersicum]
          Length = 237

 Score =  345 bits (885), Expect = 1e-92
 Identities = 156/222 (70%), Positives = 183/222 (82%), Gaps = 3/222 (1%)
 Frame = -1

Query: 922 VLVLQCLTILCSAQXXXXXFYFVQQWPASYCDTQRSCCYPTTGKPAEDFSIHGLWPNRND 743
           ++V+QCL +LC        FYFVQQWPASYCDT+RSCCYPTTGKP EDFSIHGLWPN  D
Sbjct: 12  IIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYKD 71

Query: 742 GSWPSDCDRDSSFDESEVSDLINRMQRDWPSLACPSSDGVRFWTHEWEKHGTCSLLKQRQ 563
           G WP +CDR+SS DESE SDLI+ M+++WPSLACPSSDG++FW+HEW KHGTCS L Q  
Sbjct: 72  GKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCSALNQHA 131

Query: 562 YFQTALDLKRRSNLLQVLRDAGITP--GKFYGLESIKEAIKNGVGYTPFIECNVDESHNH 389
           YFQTALD K +SNLLQ L +AGI P  G +YG+ESIK+AI+ GVG+TPFIECNVD   NH
Sbjct: 132 YFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNH 191

Query: 388 QLYQVYLCVDSSASDFIECPVFPH-GRCGREIEFPPFSSSRD 266
           QLYQVYLCVDSSAS FI+CP+FPH G+CG +IEFP FS++ D
Sbjct: 192 QLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSFSTNDD 233


>dbj|BAA84469.1| RNase NGR3 [Nicotiana glutinosa] gi|31620998|dbj|BAC77611.1|
           ribonuclease NGR3 [Nicotiana glutinosa]
          Length = 236

 Score =  340 bits (872), Expect = 3e-91
 Identities = 153/222 (68%), Positives = 185/222 (83%), Gaps = 3/222 (1%)
 Frame = -1

Query: 922 VLVLQCLTILCSAQXXXXXFYFVQQWPASYCDTQRSCCYPTTGKPAEDFSIHGLWPNRND 743
           + V+QCL +LC AQ      YFVQQWPASYCDT+RSCCYPTTGKP EDFSIHGLWPN  +
Sbjct: 12  IFVVQCLLVLCVAQDFDFF-YFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYEN 70

Query: 742 GSWPSDCDRDSSFDESEVSDLINRMQRDWPSLACPSSDGVRFWTHEWEKHGTCSLLKQRQ 563
           G WP +CDR+SS DESE+SDLI+ M+++WPSLACPSSDGVRFW+HEW KHGTCS L +R 
Sbjct: 71  GKWPQNCDRESSLDESEISDLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSALGERA 130

Query: 562 YFQTALDLKRRSNLLQVLRDAGITP--GKFYGLESIKEAIKNGVGYTPFIECNVDESHNH 389
           YFQ ALD +++SNLL+ L++A ITP  G+ Y LESIK+AI+ GVG++P+IECNVD   NH
Sbjct: 131 YFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNH 190

Query: 388 QLYQVYLCVDSSASDFIECPVFPHGR-CGREIEFPPFSSSRD 266
           Q+YQVYLCVD +A+DFI+CP+FPHGR CG +IEFPPFSS  D
Sbjct: 191 QIYQVYLCVDKTATDFIDCPIFPHGRGCGSKIEFPPFSSESD 232


>pdb|1VCZ|A Chain A, Crystal Structure Of The Rnase Nt In Complex With 5'-Gmp
           gi|66360285|pdb|1VD1|A Chain A, Crystal Structure Of
           Rnase Nt In Complex With 5'-Amp gi|66360286|pdb|1VD3|A
           Chain A, Ribonuclease Nt In Complex With 2'-ump
          Length = 217

 Score =  328 bits (841), Expect = 1e-87
 Identities = 145/202 (71%), Positives = 174/202 (86%), Gaps = 3/202 (1%)
 Frame = -1

Query: 862 YFVQQWPASYCDTQRSCCYPTTGKPAEDFSIHGLWPNRNDGSWPSDCDRDSSFDESEVSD 683
           YFVQQWPASYCDT+RSCCYPTTGKP EDFSIHGLWPN  +G WP +CDR+SS DESE+SD
Sbjct: 12  YFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSLDESEISD 71

Query: 682 LINRMQRDWPSLACPSSDGVRFWTHEWEKHGTCSLLKQRQYFQTALDLKRRSNLLQVLRD 503
           LI+ M+++WPSLACPSSDGVRFW+HEW KHGTCS L +R YFQ ALD +++SNLL+ L++
Sbjct: 72  LISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSALGERAYFQAALDFRKKSNLLENLKN 131

Query: 502 AGITP--GKFYGLESIKEAIKNGVGYTPFIECNVDESHNHQLYQVYLCVDSSASDFIECP 329
           A ITP  G+ Y LESIK+AI+ GVG++P+IECNVD   NHQ+YQVYLCVD +A+DFI+CP
Sbjct: 132 AEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQVYLCVDKTATDFIDCP 191

Query: 328 VFPHGR-CGREIEFPPFSSSRD 266
           +FPHGR CG +IEFPPFSS  D
Sbjct: 192 IFPHGRGCGSKIEFPPFSSESD 213


>ref|NP_001238449.1| uncharacterized protein LOC100305644 precursor [Glycine max]
           gi|255626171|gb|ACU13430.1| unknown [Glycine max]
          Length = 227

 Score =  317 bits (812), Expect = 3e-84
 Identities = 147/222 (66%), Positives = 178/222 (80%), Gaps = 4/222 (1%)
 Frame = -1

Query: 934 IFRVVLVLQCLTILCSAQXXXXXFYFVQQWPASYCDT-QRSCCYPTTGKPAEDFSIHGLW 758
           IF  +L++  L++LC +Q      YFVQQWP SYCDT Q SCCYPTTGKPA DF IHGLW
Sbjct: 7   IFVKLLLILHLSVLCVSQDFDFY-YFVQQWPGSYCDTTQNSCCYPTTGKPAADFGIHGLW 65

Query: 757 PNRNDGSWPSDCDRDSSFDESEVSDLINRMQRDWPSLACPSSDGVRFWTHEWEKHGTC-- 584
           PN  DGS+PS+CD ++ F  S++SDL + +QR+WP+LACPS +GV+FWTHEWEKHGTC  
Sbjct: 66  PNYKDGSYPSNCDSNNRFQPSQISDLTSSLQRNWPTLACPSGNGVQFWTHEWEKHGTCSQ 125

Query: 583 SLLKQRQYFQTALDLKRRSNLLQVLRDAGITP-GKFYGLESIKEAIKNGVGYTPFIECNV 407
           S+LKQ  YF+TALDLK+R+NLLQ L +AGI P G FY L SIK AIKN +GYTP+IECNV
Sbjct: 126 SVLKQHDYFETALDLKQRANLLQALTNAGIQPDGGFYSLSSIKGAIKNAIGYTPYIECNV 185

Query: 406 DESHNHQLYQVYLCVDSSASDFIECPVFPHGRCGREIEFPPF 281
           D S N+QLYQVYLCVD+S S+FIECPVFP G+CG ++EFP F
Sbjct: 186 DTSRNNQLYQVYLCVDTSGSNFIECPVFPRGKCGSQVEFPTF 227


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