BLASTX nr result

ID: Cephaelis21_contig00001483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001483
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...   100   1e-19
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]     94   1e-17
ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...    94   2e-17
ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17

>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/98 (46%), Positives = 62/98 (63%)
 Frame = -1

Query: 294 GRIHNLDDALGLYNQMVRLRPVPYVIQFNRLLGRIVKMNHFSNAISLYRNMCVKGIAVDE 115
           G   N DDAL  +NQMV + P P + QFN+LL  +V+M H+ + +S+YR M   G++   
Sbjct: 80  GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139

Query: 114 YTTTMVINCYCLVGRVDLGFSVLGAFFKRGLVPDVTTF 1
           YT T++INC C +  V LGFSVLG  FK G  P + TF
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITF 177


>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = -1

Query: 399 NPNSPFGFHSSAVIP---GTSSHIKLTKSGLGWLTNEIGRIHNLDDALGLYNQMVRLRPV 229
           N N  F F + ++ P    T++     K   G ++NE   +  LDDA  L+ QMVR +P+
Sbjct: 11  NGNPFFSFFAYSIAPRHYSTNTRSISVKGNFG-VSNEFENVKCLDDAFSLFRQMVRTKPL 69

Query: 228 PYVIQFNRLLGRIVKMNHFSNAISLYRNMCVKGIAVDEYTTTMVINCYCLVGRVDLGFSV 49
           P V+ F++LL  +V M H+S+ +SL+R +    I V E+  ++V+N  CL+ R DLGFSV
Sbjct: 70  PSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129

Query: 48  LGAFFKRGL 22
           L   FK+G+
Sbjct: 130 LAIHFKKGI 138


>ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/125 (39%), Positives = 72/125 (57%)
 Frame = -1

Query: 378 FHSSAVIPGTSSHIKLTKSGLGWLTNEIGRIHNLDDALGLYNQMVRLRPVPYVIQFNRLL 199
           F  S  IP  SS ++   S      ++   I N+DDA+  +N+M+ +R  P +IQFN++L
Sbjct: 9   FSVSLSIPNFSSFLQ--NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKIL 66

Query: 198 GRIVKMNHFSNAISLYRNMCVKGIAVDEYTTTMVINCYCLVGRVDLGFSVLGAFFKRGLV 19
               KM H+S A+SL   + +KGI  D  T  ++INC+C +G++  GFSVL    KRG  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 18  PDVTT 4
           PD  T
Sbjct: 127 PDTVT 131


>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/125 (39%), Positives = 72/125 (57%)
 Frame = -1

Query: 378 FHSSAVIPGTSSHIKLTKSGLGWLTNEIGRIHNLDDALGLYNQMVRLRPVPYVIQFNRLL 199
           F  S  IP  SS ++   S      ++   I N+DDA+  +N+M+ +R  P +IQFN++L
Sbjct: 9   FSVSLSIPNFSSFLQ--NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKIL 66

Query: 198 GRIVKMNHFSNAISLYRNMCVKGIAVDEYTTTMVINCYCLVGRVDLGFSVLGAFFKRGLV 19
               KM H+S A+SL   + +KGI  D  T  ++INC+C +G++  GFSVL    KRG  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 18  PDVTT 4
           PD  T
Sbjct: 127 PDTVT 131



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -1

Query: 183  MNHFSNAISLYRNMCVKGIAVDEYTTTMVINCYCLVGRVDLGFSVLGAFFKRGLVPDVTT 4
            M H+S A+SL   + +KGI  D +T  ++INC+C +G++   FS+L    KRG  PD  T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 3    F 1
            F
Sbjct: 999  F 999


>ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/125 (39%), Positives = 72/125 (57%)
 Frame = -1

Query: 378 FHSSAVIPGTSSHIKLTKSGLGWLTNEIGRIHNLDDALGLYNQMVRLRPVPYVIQFNRLL 199
           F  S  IP  SS ++   S      ++   I N+DDA+  +N+M+ +R  P +IQFN++L
Sbjct: 9   FSVSLSIPNFSSFLQ--NSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKIL 66

Query: 198 GRIVKMNHFSNAISLYRNMCVKGIAVDEYTTTMVINCYCLVGRVDLGFSVLGAFFKRGLV 19
               KM H+S A+SL   + +KGI  D  T  ++INC+C +G++  GFSVL    KRG  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 18  PDVTT 4
           PD  T
Sbjct: 127 PDTVT 131


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