BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001453
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    67   1e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    57   2e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    55   8e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 FCFDQRWVSRTGFKEVVQKAWQV--QQEGSPMFRVQSKIKKCRVDILKWKKKSETNSARN 133
           F FD+RW+++ GFKE VQ+ W    + EG P F+   KIK CR  I  WKK ++TN+ + 
Sbjct: 248 FIFDKRWINKPGFKESVQEGWAFPSRGEGVPFFQ---KIKNCRQTISIWKKSNKTNTEKL 304

Query: 132 IRQIKQQMERLQDEGGDRDWDQWADLRLQLRTAYEEEELY*RQK 1
           I ++  Q++   ++      D  A L+ +L  AY +EE++ + K
Sbjct: 305 ILELHSQLDLAYEDENFSTEDLLA-LKWKLCQAYRDEEIFWKLK 347


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/102 (30%), Positives = 52/102 (50%)
 Frame = -1

Query: 306 FCFDQRWVSRTGFKEVVQKAWQVQQEGSPMFRVQSKIKKCRVDILKWKKKSETNSARNIR 127
           F FD+RW+ + G  E + + W +   G    +   K+  CR  I KW+K       + I 
Sbjct: 24  FRFDKRWIGKDGLLEAISQGWNL-DSGFREGQFVEKLTNCRRAISKWRKSLIPFGRQTIE 82

Query: 126 QIKQQMERLQDEGGDRDWDQWADLRLQLRTAYEEEELY*RQK 1
            +K +++  Q +  DR  ++  +L L+L+ AY +EE Y  QK
Sbjct: 83  DLKAELDVAQRD-DDRSREEITELTLRLKEAYRDEEQYWYQK 123


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/102 (31%), Positives = 56/102 (54%)
 Frame = -1

Query: 306 FCFDQRWVSRTGFKEVVQKAWQVQQEGSPMFRVQSKIKKCRVDILKWKKKSETNSARNIR 127
           F +D+RWV R GFK+++   W  QQ       +  KI  CR +I KWK+ S+ +SA  I+
Sbjct: 240 FKYDKRWVQREGFKDLLCNFWS-QQSTKTNALMMEKIASCRREISKWKRVSKPSSAVRIQ 298

Query: 126 QIKQQMERLQDEGGDRDWDQWADLRLQLRTAYEEEELY*RQK 1
           +++ +++    +    D  + A L+ +L   Y  EE + ++K
Sbjct: 299 ELQFKLDAATKQ-IPFDRRELARLKKELSQEYNNEEQFWQEK 339