BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001402
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   539   e-151
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   536   e-150
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   535   e-149
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi...   518   e-144
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II su...   514   e-143

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  539 bits (1388), Expect = e-151
 Identities = 275/321 (85%), Positives = 295/321 (91%)
 Frame = +1

Query: 79   MEGVSHQRFPTVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 258
            MEG S+QRFP +KIRELKDDY KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 259  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 438
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQC+YCSVEFHLRAKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 439  TSRELISSDPSVVPVDFADSLSSSGYDNLENRGIIIVKLRRGQELRLRAIARKGIGKDHA 618
            TS++L SSD +VVPVDF+DS   SGYD+ E RGIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLYSSDHTVVPVDFSDS---SGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 619  KWSPAATVTFMYEPDIYINEDLMEKLSLENKLSIVESSPTKVFGIDENTERLVVVDAEAY 798
            KWSPAATVTFMYEPDI+INEDLME LSLE K S VESSPTKVF ID NT+++VVVD EAY
Sbjct: 178  KWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAY 237

Query: 799  TYDDEVIKKCESLDVPRLIEIHPKEDSFIFTVESTVAIKASQLVLNAIDILKQKLDAVRL 978
            TYD+EVIKK ES+  P L+ I  KEDSFIFTVEST AIKASQLVLNAI+ILKQKLDAVRL
Sbjct: 238  TYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRL 297

Query: 979  SEDTVEADDQFGELGAHMRGG 1041
            SEDTVEADDQFGELGAHMRGG
Sbjct: 298  SEDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  536 bits (1380), Expect = e-150
 Identities = 269/321 (83%), Positives = 300/321 (93%)
 Frame = +1

Query: 79   MEGVSHQRFPTVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 258
            MEGVS+QRFP +KIRE+KDDYAKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 259  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 438
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 439  TSRELISSDPSVVPVDFADSLSSSGYDNLENRGIIIVKLRRGQELRLRAIARKGIGKDHA 618
            TS++LISSD +VVPVDF+DS   SGYD+ + +GIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLISSDHTVVPVDFSDS---SGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 619  KWSPAATVTFMYEPDIYINEDLMEKLSLENKLSIVESSPTKVFGIDENTERLVVVDAEAY 798
            KWSPAATVTFMYEP+I+INEDLME L+LE K S VESSPTKVF ID +++++VV DAEAY
Sbjct: 178  KWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAY 237

Query: 799  TYDDEVIKKCESLDVPRLIEIHPKEDSFIFTVESTVAIKASQLVLNAIDILKQKLDAVRL 978
            TYDDEV+KK E++  P L+EI+ KEDSFIFTVEST AIKASQLVLNAID+LKQKLDAVRL
Sbjct: 238  TYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRL 297

Query: 979  SEDTVEADDQFGELGAHMRGG 1041
            SEDTVEADDQFGELGAHMRGG
Sbjct: 298  SEDTVEADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
            vinifera]
          Length = 318

 Score =  535 bits (1377), Expect = e-149
 Identities = 268/321 (83%), Positives = 300/321 (93%)
 Frame = +1

Query: 79   MEGVSHQRFPTVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 258
            MEGVS+QRFP +KIRE+KDDYAKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 259  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 438
            VLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 439  TSRELISSDPSVVPVDFADSLSSSGYDNLENRGIIIVKLRRGQELRLRAIARKGIGKDHA 618
            TS++LISSD +VVPVDF+DS   SGYD+ + +GIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLISSDHTVVPVDFSDS---SGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 619  KWSPAATVTFMYEPDIYINEDLMEKLSLENKLSIVESSPTKVFGIDENTERLVVVDAEAY 798
            KWSPAATVTFMYEP+I+INEDLME L+LE K S VESSPTKVF ID +++++VV DAEAY
Sbjct: 178  KWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAY 237

Query: 799  TYDDEVIKKCESLDVPRLIEIHPKEDSFIFTVESTVAIKASQLVLNAIDILKQKLDAVRL 978
            TYDDEV+KK E++  P L+EI+ KEDSFIFTVEST AIKASQLVLNAID+LKQKLDAVRL
Sbjct: 238  TYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRL 297

Query: 979  SEDTVEADDQFGELGAHMRGG 1041
            SEDTVEADDQFGELGAHMRGG
Sbjct: 298  SEDTVEADDQFGELGAHMRGG 318


>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1|
            RBP36A [Arabidopsis lyrata subsp. lyrata]
          Length = 319

 Score =  518 bits (1333), Expect = e-144
 Identities = 259/321 (80%), Positives = 291/321 (90%)
 Frame = +1

Query: 79   MEGVSHQRFPTVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 258
            M+G ++QRFP + IRELKDDYAKFELR+TD S+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1    MDGATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 259  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 438
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 439  TSRELISSDPSVVPVDFADSLSSSGYDNLENRGIIIVKLRRGQELRLRAIARKGIGKDHA 618
            TSR+L S+DP+V PVDF  ++ SS  D+ E +GIIIVKLRRGQEL+LRAIARKGIGKDHA
Sbjct: 121  TSRDLYSADPTVTPVDF--TIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHA 178

Query: 619  KWSPAATVTFMYEPDIYINEDLMEKLSLENKLSIVESSPTKVFGIDENTERLVVVDAEAY 798
            KWSPAATVTFMYEPDI INED+M+ LS E K+ ++ESSPTKVFGID  T ++VVVD EAY
Sbjct: 179  KWSPAATVTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAY 238

Query: 799  TYDDEVIKKCESLDVPRLIEIHPKEDSFIFTVESTVAIKASQLVLNAIDILKQKLDAVRL 978
            TYD+EVIKK E++  P LIEIHPK+DSFIFTVEST A+KASQLVLNAIDILKQKLDAVRL
Sbjct: 239  TYDEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRL 298

Query: 979  SEDTVEADDQFGELGAHMRGG 1041
            S+DTVEADDQFGELGAHMRGG
Sbjct: 299  SDDTVEADDQFGELGAHMRGG 319


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Glycine max]
          Length = 320

 Score =  514 bits (1325), Expect = e-143
 Identities = 261/319 (81%), Positives = 290/319 (90%)
 Frame = +1

Query: 85   GVSHQRFPTVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSVL 264
            GVS+ R P VKIRELKDDYAKFELRDTDASIANALRRVMIAEVPT+AIDLVEIEVNSSVL
Sbjct: 4    GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63

Query: 265  NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDVTS 444
            NDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDVTS
Sbjct: 64   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123

Query: 445  RELISSDPSVVPVDFADSLSSSGYDNLENRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 624
            ++L SSDP+V PVDF+D  ++   DN  NRGIIIVKLRRGQEL+LRAIARKGIGKDHAKW
Sbjct: 124  KDLYSSDPTVSPVDFSDPSATDSPDN--NRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 181

Query: 625  SPAATVTFMYEPDIYINEDLMEKLSLENKLSIVESSPTKVFGIDENTERLVVVDAEAYTY 804
            SPAATVTFMYEP+I+INEDLME L+LE K   V+SSPT+VF ID  T++++VVDAEAYTY
Sbjct: 182  SPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTY 241

Query: 805  DDEVIKKCESLDVPRLIEIHPKEDSFIFTVESTVAIKASQLVLNAIDILKQKLDAVRLSE 984
            DDEV+KK E++  P L+EI  ++DSFIFTVEST A+KASQLVLNAI+ILKQKLDAVRLSE
Sbjct: 242  DDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSE 301

Query: 985  DTVEADDQFGELGAHMRGG 1041
            DTVEADDQFGELGAHMRGG
Sbjct: 302  DTVEADDQFGELGAHMRGG 320