BLASTX nr result

ID: Cephaelis21_contig00001398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001398
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46763.1| unknown [Solanum tuberosum]                            102   1e-30
ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like ...   102   4e-30
gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]     99   1e-28
ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...    95   1e-28
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...    94   4e-28

>gb|ABA46763.1| unknown [Solanum tuberosum]
          Length = 143

 Score =  102 bits (253), Expect(2) = 1e-30
 Identities = 54/73 (73%), Positives = 55/73 (75%)
 Frame = +2

Query: 281 FSKEPNNLFNLHSYKHSGLANKKTVTIQPGGKDQSVLLAXXXXXXXXXXXXXXXXSVMKK 460
           FSKEPNNL NLHSYKHSGLANKKTVTIQP GKD+SVLLA                SVMKK
Sbjct: 33  FSKEPNNLCNLHSYKHSGLANKKTVTIQPEGKDKSVLLATSKTKKQNMPSSLLNKSVMKK 92

Query: 461 EFRRMAKAVTNQV 499
           EFRRMAKAVTNQV
Sbjct: 93  EFRRMAKAVTNQV 105



 Score = 59.3 bits (142), Expect(2) = 1e-30
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 192 MATVPGQLIWEIVKKNNSFLVKEFGNGTA 278
           M TVPGQL+WEIVKKNNSFLVKEFGNG+A
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGSA 29


>ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
           sativus] gi|449458191|ref|XP_004146831.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
           gi|449476678|ref|XP_004154804.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 1 [Cucumis sativus]
           gi|449476681|ref|XP_004154805.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
          Length = 148

 Score =  102 bits (253), Expect(2) = 4e-30
 Identities = 52/75 (69%), Positives = 58/75 (77%)
 Frame = +2

Query: 278 KFSKEPNNLFNLHSYKHSGLANKKTVTIQPGGKDQSVLLAXXXXXXXXXXXXXXXXSVMK 457
           +FSKE NNL+NL+SYKHSGLANKKTVTIQPGGKDQS+LLA                S+MK
Sbjct: 32  QFSKEANNLYNLNSYKHSGLANKKTVTIQPGGKDQSILLATTKSKKQNKPSSSLHKSLMK 91

Query: 458 KEFRRMAKAVTNQVS 502
           KEFRRMAKAVTNQV+
Sbjct: 92  KEFRRMAKAVTNQVA 106



 Score = 57.4 bits (137), Expect(2) = 4e-30
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +3

Query: 192 MATVPGQLIWEIVKKNNSFLVKEFGNGTA 278
           MA VPGQLIWEIVK+NNSFLVKEFG GTA
Sbjct: 1   MAAVPGQLIWEIVKRNNSFLVKEFGRGTA 29


>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score = 98.6 bits (244), Expect(2) = 1e-28
 Identities = 51/75 (68%), Positives = 56/75 (74%)
 Frame = +2

Query: 278 KFSKEPNNLFNLHSYKHSGLANKKTVTIQPGGKDQSVLLAXXXXXXXXXXXXXXXXSVMK 457
           +FSKEPNNL+N++SYKHSGLANKKTVTIQP GKDQSVLLA                SVMK
Sbjct: 32  RFSKEPNNLYNVNSYKHSGLANKKTVTIQPAGKDQSVLLATTKSKKQNKPSSLLHKSVMK 91

Query: 458 KEFRRMAKAVTNQVS 502
           KEF RMAKAV NQV+
Sbjct: 92  KEFPRMAKAVKNQVT 106



 Score = 55.8 bits (133), Expect(2) = 1e-28
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 192 MATVPGQLIWEIVKKNNSFLVKEFGNGTA 278
           MATVPGQLIWE+VK+NN FLVK+FG GTA
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTA 29


>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score = 94.7 bits (234), Expect(2) = 1e-28
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = +2

Query: 278 KFSKEPNNLFNLHSYKHSGLANKKTVTIQPGGKDQSVLLAXXXXXXXXXXXXXXXXSVMK 457
           +FS+EPNNL+NL+++K+SGLANKKTVT+QP GKDQSVLLA                SVMK
Sbjct: 32  QFSREPNNLYNLNTFKYSGLANKKTVTVQPTGKDQSVLLATTKTKKQNKPAALLHKSVMK 91

Query: 458 KEFRRMAKAVTNQVS 502
           KEFRRMAKAV NQV+
Sbjct: 92  KEFRRMAKAVQNQVA 106



 Score = 59.7 bits (143), Expect(2) = 1e-28
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +3

Query: 192 MATVPGQLIWEIVKKNNSFLVKEFGNGTAS 281
           MATVPGQLIWE+VKKNNSFLVKEFG GT S
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKEFGRGTQS 30


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score = 94.0 bits (232), Expect(2) = 4e-28
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = +2

Query: 278 KFSKEPNNLFNLHSYKHSGLANKKTVTIQPGGKDQSVLLAXXXXXXXXXXXXXXXXSVMK 457
           +FS+EPNNL+NL+++K+SGLAN+KTVT+QP GKDQSVLLA                SVMK
Sbjct: 32  QFSREPNNLYNLNTFKYSGLANQKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMK 91

Query: 458 KEFRRMAKAVTNQVS 502
           KEFRRMAKAV NQV+
Sbjct: 92  KEFRRMAKAVQNQVA 106



 Score = 58.9 bits (141), Expect(2) = 4e-28
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +3

Query: 192 MATVPGQLIWEIVKKNNSFLVKEFGNGTAS 281
           M+TVPGQLIWEIVKKNNSFLVKEFG GT S
Sbjct: 1   MSTVPGQLIWEIVKKNNSFLVKEFGRGTQS 30