BLASTX nr result

ID: Cephaelis21_contig00001359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001359
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22977.3| unnamed protein product [Vitis vinifera]              169   7e-40
ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like ...   169   7e-40
ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39
ref|XP_002882427.1| hypothetical protein ARALYDRAFT_477850 [Arab...   163   3e-38
ref|XP_002330176.1| predicted protein [Populus trichocarpa] gi|1...   163   3e-38

>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  169 bits (427), Expect = 7e-40
 Identities = 92/130 (70%), Positives = 97/130 (74%)
 Frame = -3

Query: 392 LYRFLTRRSESKFNAVILKRLFMSKINKPPMSLSRLVSYMKGKEDKIAVLVGTVTDDLRV 213
           LYRFL RR+ SKFNAVILKRLFMSKINKPPMSLSRL+ YM+GKEDKIAVLVGTVTDDLRV
Sbjct: 99  LYRFLVRRTGSKFNAVILKRLFMSKINKPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRV 158

Query: 212 YEXXXXXXXXXXXXXXXXXXXXXXXXXXXPKMKVTALRFTQNARARIENAGGECLTFDQL 33
           YE                           P +KVTALRFT+ ARARIE AGGECLTFDQL
Sbjct: 159 YE--------------------------VPTLKVTALRFTERARARIEKAGGECLTFDQL 192

Query: 32  ALRAPLGQNT 3
           ALRAPLGQNT
Sbjct: 193 ALRAPLGQNT 202


>ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  169 bits (427), Expect = 7e-40
 Identities = 92/130 (70%), Positives = 97/130 (74%)
 Frame = -3

Query: 392 LYRFLTRRSESKFNAVILKRLFMSKINKPPMSLSRLVSYMKGKEDKIAVLVGTVTDDLRV 213
           LYRFL RR+ SKFNAVILKRLFMSKINKPPMSLSRL+ YM+GKEDKIAVLVGTVTDDLRV
Sbjct: 32  LYRFLVRRTGSKFNAVILKRLFMSKINKPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRV 91

Query: 212 YEXXXXXXXXXXXXXXXXXXXXXXXXXXXPKMKVTALRFTQNARARIENAGGECLTFDQL 33
           YE                           P +KVTALRFT+ ARARIE AGGECLTFDQL
Sbjct: 92  YE--------------------------VPTLKVTALRFTERARARIEKAGGECLTFDQL 125

Query: 32  ALRAPLGQNT 3
           ALRAPLGQNT
Sbjct: 126 ALRAPLGQNT 135


>ref|XP_002301485.1| predicted protein [Populus trichocarpa] gi|222843211|gb|EEE80758.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  166 bits (420), Expect = 4e-39
 Identities = 88/130 (67%), Positives = 98/130 (75%)
 Frame = -3

Query: 392 LYRFLTRRSESKFNAVILKRLFMSKINKPPMSLSRLVSYMKGKEDKIAVLVGTVTDDLRV 213
           LYRFL RR+ SKFNAVILKRLFMSKINKPP+SLSRL+++MKGKEDKIAV+VGT+TDD+RV
Sbjct: 32  LYRFLVRRTGSKFNAVILKRLFMSKINKPPLSLSRLITFMKGKEDKIAVVVGTITDDIRV 91

Query: 212 YEXXXXXXXXXXXXXXXXXXXXXXXXXXXPKMKVTALRFTQNARARIENAGGECLTFDQL 33
           YE                           P +KVTALRFT+ ARARIE AGGECLTFDQL
Sbjct: 92  YE--------------------------VPALKVTALRFTETARARIEKAGGECLTFDQL 125

Query: 32  ALRAPLGQNT 3
           ALRAPLGQNT
Sbjct: 126 ALRAPLGQNT 135


>ref|XP_002882427.1| hypothetical protein ARALYDRAFT_477850 [Arabidopsis lyrata subsp.
           lyrata] gi|297328267|gb|EFH58686.1| hypothetical protein
           ARALYDRAFT_477850 [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score =  163 bits (413), Expect = 3e-38
 Identities = 89/130 (68%), Positives = 96/130 (73%)
 Frame = -3

Query: 392 LYRFLTRRSESKFNAVILKRLFMSKINKPPMSLSRLVSYMKGKEDKIAVLVGTVTDDLRV 213
           LYRFL RR++SKFNAVILKRLFMSK+NK P+SLSRLV +M GKEDKIAVLVGTVTDDLRV
Sbjct: 32  LYRFLVRRTQSKFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTVTDDLRV 91

Query: 212 YEXXXXXXXXXXXXXXXXXXXXXXXXXXXPKMKVTALRFTQNARARIENAGGECLTFDQL 33
           +E                           P MKVTALRFT+ ARARIE AGGECLTFDQL
Sbjct: 92  HE--------------------------IPAMKVTALRFTERARARIEKAGGECLTFDQL 125

Query: 32  ALRAPLGQNT 3
           ALRAPLGQNT
Sbjct: 126 ALRAPLGQNT 135


>ref|XP_002330176.1| predicted protein [Populus trichocarpa] gi|118482972|gb|ABK93398.1|
           unknown [Populus trichocarpa]
           gi|118483781|gb|ABK93783.1| unknown [Populus
           trichocarpa] gi|222871632|gb|EEF08763.1| predicted
           protein [Populus trichocarpa]
          Length = 187

 Score =  163 bits (413), Expect = 3e-38
 Identities = 88/130 (67%), Positives = 97/130 (74%)
 Frame = -3

Query: 392 LYRFLTRRSESKFNAVILKRLFMSKINKPPMSLSRLVSYMKGKEDKIAVLVGTVTDDLRV 213
           LYRFL RR+ S+FNAVILKRLFMSKINK P+SLSRL+++MKGKEDKIAVLVGTVTDD+RV
Sbjct: 32  LYRFLVRRTGSRFNAVILKRLFMSKINKAPLSLSRLITFMKGKEDKIAVLVGTVTDDIRV 91

Query: 212 YEXXXXXXXXXXXXXXXXXXXXXXXXXXXPKMKVTALRFTQNARARIENAGGECLTFDQL 33
           YE                           P +KVTALRFT+ ARARIE AGGECLTFDQL
Sbjct: 92  YE--------------------------VPALKVTALRFTETARARIEKAGGECLTFDQL 125

Query: 32  ALRAPLGQNT 3
           ALRAPLGQNT
Sbjct: 126 ALRAPLGQNT 135


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