BLASTX nr result

ID: Cephaelis21_contig00001332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001332
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35950.3| unnamed protein product [Vitis vinifera]              148   2e-36
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   148   2e-36
ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 ...   151   2e-34
ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 ...   151   2e-34
dbj|BAF02124.1| root hair defective 3 [Arabidopsis thaliana]          151   2e-34

>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  148 bits (374), Expect(2) = 2e-36
 Identities = 88/173 (50%), Positives = 107/173 (61%)
 Frame = +3

Query: 6    KLNEALGGPVEALLDEANDDTWPAIKKLLWRETEIATAGFSSALLGFKMDDETKEKMLAK 185
            KLNE L GPVEALLD A+++TWPAI+ LL RETE A  G SSAL GF MD++TK+KMLA 
Sbjct: 679  KLNEGLSGPVEALLDGASNETWPAIRVLLLRETESAILGLSSALSGFDMDEQTKDKMLAS 738

Query: 186  L*DYARGVVGSKAKEEAGKVLIHMKDRFSTLFSHNSD*CPRSGLGRKTFEQLPKLRALL* 365
            L +YARGVV +KA+EEAG+VLI MKDRF+TLFSH+SD  PR   G++    + K      
Sbjct: 739  LENYARGVVEAKAREEAGRVLIRMKDRFATLFSHDSDSMPRVWTGKEDIRAITKT----- 793

Query: 366  AYFIEDSFILLFS*HIXXXXXXXXXXXXXXXXXXXMAVVRLDNEEDNIEKTLS 524
                  S + L S                      MA +RLD+  DNIE TLS
Sbjct: 794  ---ARSSSLKLLS---------------------VMAAIRLDDYTDNIENTLS 822



 Score = 31.2 bits (69), Expect(2) = 2e-36
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 574 IDPLASSTWVEVPP 615
           +DPLASSTW EVPP
Sbjct: 841 VDPLASSTWEEVPP 854


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score =  148 bits (374), Expect(2) = 2e-36
 Identities = 88/173 (50%), Positives = 107/173 (61%)
 Frame = +3

Query: 6   KLNEALGGPVEALLDEANDDTWPAIKKLLWRETEIATAGFSSALLGFKMDDETKEKMLAK 185
           KLNE L GPVEALLD A+++TWPAI+ LL RETE A  G SSAL GF MD++TK+KMLA 
Sbjct: 521 KLNEGLSGPVEALLDGASNETWPAIRVLLLRETESAILGLSSALSGFDMDEQTKDKMLAS 580

Query: 186 L*DYARGVVGSKAKEEAGKVLIHMKDRFSTLFSHNSD*CPRSGLGRKTFEQLPKLRALL* 365
           L +YARGVV +KA+EEAG+VLI MKDRF+TLFSH+SD  PR   G++    + K      
Sbjct: 581 LENYARGVVEAKAREEAGRVLIRMKDRFATLFSHDSDSMPRVWTGKEDIRAITKT----- 635

Query: 366 AYFIEDSFILLFS*HIXXXXXXXXXXXXXXXXXXXMAVVRLDNEEDNIEKTLS 524
                 S + L S                      MA +RLD+  DNIE TLS
Sbjct: 636 ---ARSSSLKLLS---------------------VMAAIRLDDYTDNIENTLS 664



 Score = 31.2 bits (69), Expect(2) = 2e-36
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 574 IDPLASSTWVEVPP 615
           +DPLASSTW EVPP
Sbjct: 683 VDPLASSTWEEVPP 696


>ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana] gi|332641907|gb|AEE75428.1| Root hair
           defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana]
          Length = 738

 Score =  151 bits (382), Expect = 2e-34
 Identities = 86/173 (49%), Positives = 111/173 (64%)
 Frame = +3

Query: 6   KLNEALGGPVEALLDEANDDTWPAIKKLLWRETEIATAGFSSALLGFKMDDETKEKMLAK 185
           KLN AL GPVEALLD AND+TWPAI+KLL RE E+A  G S+AL GF+MD+ET+ KMLA 
Sbjct: 396 KLNVALSGPVEALLDGANDETWPAIRKLLRREGELAVYGLSNALSGFEMDEETRSKMLAD 455

Query: 186 L*DYARGVVGSKAKEEAGKVLIHMKDRFSTLFSHNSD*CPRSGLGRKTFEQLPKLRALL* 365
           L +YARG+V +KAKEEAG+ ++ MKDRF+T+FSH+SD  PR   G++    + K+     
Sbjct: 456 LENYARGIVETKAKEEAGRAMMRMKDRFATIFSHDSDSMPRVWTGKEDIRAITKM----- 510

Query: 366 AYFIEDSFILLFS*HIXXXXXXXXXXXXXXXXXXXMAVVRLDNEEDNIEKTLS 524
                 + + L S                      MAV+RLD+E DNIEKTL+
Sbjct: 511 ---ARSASLKLLS---------------------VMAVIRLDDELDNIEKTLT 539


>ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana] gi|75279781|sp|P93042.1|RHD3_ARATH RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3; AltName:
           Full=Protein FRAGILE FIBER 4; AltName: Full=Protein SEY1
           homolog 1 gi|1839188|gb|AAB58375.1| root hair defective
           3 [Arabidopsis thaliana] gi|20260178|gb|AAM12987.1|
           unknown protein [Arabidopsis thaliana]
           gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis
           thaliana] gi|332641908|gb|AEE75429.1| Root hair
           defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana]
          Length = 802

 Score =  151 bits (382), Expect = 2e-34
 Identities = 86/173 (49%), Positives = 111/173 (64%)
 Frame = +3

Query: 6   KLNEALGGPVEALLDEANDDTWPAIKKLLWRETEIATAGFSSALLGFKMDDETKEKMLAK 185
           KLN AL GPVEALLD AND+TWPAI+KLL RE E+A  G S+AL GF+MD+ET+ KMLA 
Sbjct: 460 KLNVALSGPVEALLDGANDETWPAIRKLLRREGELAVYGLSNALSGFEMDEETRSKMLAD 519

Query: 186 L*DYARGVVGSKAKEEAGKVLIHMKDRFSTLFSHNSD*CPRSGLGRKTFEQLPKLRALL* 365
           L +YARG+V +KAKEEAG+ ++ MKDRF+T+FSH+SD  PR   G++    + K+     
Sbjct: 520 LENYARGIVETKAKEEAGRAMMRMKDRFATIFSHDSDSMPRVWTGKEDIRAITKM----- 574

Query: 366 AYFIEDSFILLFS*HIXXXXXXXXXXXXXXXXXXXMAVVRLDNEEDNIEKTLS 524
                 + + L S                      MAV+RLD+E DNIEKTL+
Sbjct: 575 ---ARSASLKLLS---------------------VMAVIRLDDELDNIEKTLT 603


>dbj|BAF02124.1| root hair defective 3 [Arabidopsis thaliana]
          Length = 585

 Score =  151 bits (382), Expect = 2e-34
 Identities = 86/173 (49%), Positives = 111/173 (64%)
 Frame = +3

Query: 6   KLNEALGGPVEALLDEANDDTWPAIKKLLWRETEIATAGFSSALLGFKMDDETKEKMLAK 185
           KLN AL GPVEALLD AND+TWPAI+KLL RE E+A  G S+AL GF+MD+ET+ KMLA 
Sbjct: 243 KLNVALSGPVEALLDGANDETWPAIRKLLRREGELAVYGLSNALSGFEMDEETRSKMLAD 302

Query: 186 L*DYARGVVGSKAKEEAGKVLIHMKDRFSTLFSHNSD*CPRSGLGRKTFEQLPKLRALL* 365
           L +YARG+V +KAKEEAG+ ++ MKDRF+T+FSH+SD  PR   G++    + K+     
Sbjct: 303 LENYARGIVETKAKEEAGRAMMRMKDRFATIFSHDSDSMPRVWTGKEDIRAITKM----- 357

Query: 366 AYFIEDSFILLFS*HIXXXXXXXXXXXXXXXXXXXMAVVRLDNEEDNIEKTLS 524
                 + + L S                      MAV+RLD+E DNIEKTL+
Sbjct: 358 ---ARSASLKLLS---------------------VMAVIRLDDELDNIEKTLT 386


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