BLASTX nr result

ID: Cephaelis21_contig00001328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001328
         (1167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot...   445   e-122
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   444   e-122
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   424   e-116
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici...   413   e-113

>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
            Short=Poly(A)-binding protein RBP45; AltName:
            Full=RNA-binding protein 45; Short=NplRBP45
            gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
            [Nicotiana plumbaginifolia]
          Length = 409

 Score =  445 bits (1144), Expect = e-122
 Identities = 221/284 (77%), Positives = 246/284 (86%), Gaps = 5/284 (1%)
 Frame = +1

Query: 331  QQYGIAP-----PASASGPSEIRSLWIGDLQYWMDENFLSSCFYHTGELVSVKVIRNKVT 495
            QQYG        P+    P+E+RSLWIGDLQYWMDEN+LS+CFYHTGELVS KVIRNK T
Sbjct: 62   QQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQT 121

Query: 496  GQSEGYGFLEFRSHAAAENVLQTYNGTLIPNMEQHFRLNWATLGAGEKRTDDSADFTIFV 675
            GQSEGYGFLEFRSHAAAE +LQTYNGTL+PN+EQ+FR+NWA+LGAGE+R DDSA+ TIFV
Sbjct: 122  GQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFV 180

Query: 676  GDLATDVTDYQLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNG 855
            GDLA DVTDY LQETFK+VYSSV+GAKVVTDR TGRSKGYGF++F DE+EQ+RAMTEMNG
Sbjct: 181  GDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNG 240

Query: 856  VLCSTRPMRIGPAANKKPVVVQQFQKAPSQNPQGSQGESDPNNTTIFVGGLDTSVTDDHL 1035
            VLCSTRPMRIGPAANKKPV     QKA  QNPQ +QGESDPNNTTIFVGGLD +V ++HL
Sbjct: 241  VLCSTRPMRIGPAANKKPVGTP--QKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHL 298

Query: 1036 RQVFGQYGELVHVKIPVGKRCGFVQFTNRANAEQALVSLNGSQL 1167
            RQVF  YGELVHVKI  GKRCGFVQF  RA+AEQAL SLNG+QL
Sbjct: 299  RQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQL 342



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
 Frame = +1

Query: 385 SLWIGDLQYWMDENFLSSCFYHTGELV-SVKVIRNKVTGQSEGYGFLEFRSHAAAENVLQ 561
           ++++GDL   + +  L   F      V   KV+ +++TG+S+GYGF++F   +     + 
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236

Query: 562 TYNGTLIPNMEQHF--RLNWATLGAGEKRT----------DDSADFTIFVGDLATDVTDY 705
             NG L            N   +G  +K T           D  + TIFVG L   V + 
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296

Query: 706 QLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNGVLCSTRPMRI 885
            L++ F   Y  +   K+V        K  GF++FG      +A++ +NG     + +R+
Sbjct: 297 HLRQVFSP-YGELVHVKIVA------GKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRL 349


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  444 bits (1141), Expect = e-122
 Identities = 219/281 (77%), Positives = 240/281 (85%)
 Frame = +1

Query: 325  QAQQYGIAPPASASGPSEIRSLWIGDLQYWMDENFLSSCFYHTGELVSVKVIRNKVTGQS 504
            Q QQY  AP   AS P EIRSLWIGDLQ WM+EN+L  CF  TGE+VSVKVIRNK TGQ 
Sbjct: 73   QQQQYVAAP--QASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQC 130

Query: 505  EGYGFLEFRSHAAAENVLQTYNGTLIPNMEQHFRLNWATLGAGEKRTDDSADFTIFVGDL 684
            EGYGF+E  + AAAE +LQTYNGTL+PN EQ+FRLNWATLGAGE+R DD+ D+TIFVGDL
Sbjct: 131  EGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDL 190

Query: 685  ATDVTDYQLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNGVLC 864
            A+DVTDY LQETF+  Y SVKGAKVVTDR TGRSKGYGF+RFGDE EQ+RAM EMNG+ C
Sbjct: 191  ASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFC 250

Query: 865  STRPMRIGPAANKKPVVVQQFQKAPSQNPQGSQGESDPNNTTIFVGGLDTSVTDDHLRQV 1044
            STRPMRIGPAA KKPV  QQFQKA  QN QG+QGESDPNNTTIFVGGLD++VTDD+LRQV
Sbjct: 251  STRPMRIGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQV 310

Query: 1045 FGQYGELVHVKIPVGKRCGFVQFTNRANAEQALVSLNGSQL 1167
            F QYGELVHVKIPVGKRCGFVQF NRA AEQAL  LNG+QL
Sbjct: 311  FSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQL 351


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  424 bits (1091), Expect = e-116
 Identities = 212/279 (75%), Positives = 232/279 (83%)
 Frame = +1

Query: 331  QQYGIAPPASASGPSEIRSLWIGDLQYWMDENFLSSCFYHTGELVSVKVIRNKVTGQSEG 510
            QQY  AP   AS P EIRSLWIGDLQ WM+EN+   CF  TGE+VSVKVIRNK TGQ EG
Sbjct: 60   QQYVAAP--QASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEG 117

Query: 511  YGFLEFRSHAAAENVLQTYNGTLIPNMEQHFRLNWATLGAGEKRTDDSADFTIFVGDLAT 690
            YGF+E  + AAAE +LQTYNGTL+PN EQ+FRLNWATLGAGE+R DD+ D+TIFVGDLA+
Sbjct: 118  YGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLAS 177

Query: 691  DVTDYQLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNGVLCST 870
            DVTDY LQETF+  Y SVKGAKVVTDR TGRSKGYGF+RFGDE EQ+RAM EMNG+ CST
Sbjct: 178  DVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCST 237

Query: 871  RPMRIGPAANKKPVVVQQFQKAPSQNPQGSQGESDPNNTTIFVGGLDTSVTDDHLRQVFG 1050
            RPMRIGPAA KKPV       A  QN QG QGESDPNNTTIFVGGLD++VTDD+LRQVF 
Sbjct: 238  RPMRIGPAATKKPV------GASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFS 291

Query: 1051 QYGELVHVKIPVGKRCGFVQFTNRANAEQALVSLNGSQL 1167
            QYGELVHVKIPVGKRCGFVQF NRA AEQAL  LNG+QL
Sbjct: 292  QYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQL 330


>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  415 bits (1066), Expect = e-113
 Identities = 207/278 (74%), Positives = 229/278 (82%)
 Frame = +1

Query: 334  QYGIAPPASASGPSEIRSLWIGDLQYWMDENFLSSCFYHTGELVSVKVIRNKVTGQSEGY 513
            QYG A  ++A G  EI+SLWIGDLQ WMDEN++ S F  TGE+V  KVIRNK TG  EGY
Sbjct: 52   QYGSAAGSAAVG-DEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGY 110

Query: 514  GFLEFRSHAAAENVLQTYNGTLIPNMEQHFRLNWATLGAGEKRTDDSADFTIFVGDLATD 693
            GF+EF SHAAAE +LQTYNGT +PN EQ FRLNWATLGAGE+R DD  D+T+F+GDLA D
Sbjct: 111  GFIEFVSHAAAERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAAD 170

Query: 694  VTDYQLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNGVLCSTR 873
            V DY LQETF+ VYSSVKGAKVVTDR TGRSKGYGF+RF DENEQMRAM EMNG  CSTR
Sbjct: 171  VNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTR 230

Query: 874  PMRIGPAANKKPVVVQQFQKAPSQNPQGSQGESDPNNTTIFVGGLDTSVTDDHLRQVFGQ 1053
            PMRIGPAA KKP + QQ+QKA  Q+PQG+QGESDPNNTTIFVG LD SVTDD LR VF +
Sbjct: 231  PMRIGPAATKKP-LTQQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSK 289

Query: 1054 YGELVHVKIPVGKRCGFVQFTNRANAEQALVSLNGSQL 1167
            YGELVHVKIP GKRCGFVQF NR  AEQAL  LNG+Q+
Sbjct: 290  YGELVHVKIPAGKRCGFVQFANRTCAEQALSMLNGTQI 327


>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223537765|gb|EEF39383.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 404

 Score =  413 bits (1062), Expect = e-113
 Identities = 205/279 (73%), Positives = 231/279 (82%), Gaps = 1/279 (0%)
 Frame = +1

Query: 334  QYGIAPPASASGPS-EIRSLWIGDLQYWMDENFLSSCFYHTGELVSVKVIRNKVTGQSEG 510
            QYG+A  AS    S EI+SLWIGDLQ WMDE +L + F  TGE+VS KVIRNK TG  EG
Sbjct: 49   QYGVAGAASGGAESSEIKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEG 108

Query: 511  YGFLEFRSHAAAENVLQTYNGTLIPNMEQHFRLNWATLGAGEKRTDDSADFTIFVGDLAT 690
            YGF+EF + AAAE +LQTYNGT +PN EQ+FRLNWATL AGE+R DD  D+T+FVGDLA 
Sbjct: 109  YGFIEFINRAAAERILQTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAP 168

Query: 691  DVTDYQLQETFKAVYSSVKGAKVVTDRNTGRSKGYGFIRFGDENEQMRAMTEMNGVLCST 870
            DV D+ LQETF+ VY SVKGAKVVTDR TGR+KGYGF+RFGDENEQ RAM EMNG  CST
Sbjct: 169  DVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCST 228

Query: 871  RPMRIGPAANKKPVVVQQFQKAPSQNPQGSQGESDPNNTTIFVGGLDTSVTDDHLRQVFG 1050
            R MRIGPAA KKP  VQQ+QKAP Q+ QG+QGE+DPNNTTIFVG LD SV+D+HLRQVFG
Sbjct: 229  RAMRIGPAATKKP-AVQQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFG 287

Query: 1051 QYGELVHVKIPVGKRCGFVQFTNRANAEQALVSLNGSQL 1167
            +YGELVHVKIP GKRCGFVQF NRA AEQAL+ LNG+QL
Sbjct: 288  KYGELVHVKIPAGKRCGFVQFANRACAEQALLGLNGTQL 326


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