BLASTX nr result

ID: Cephaelis21_contig00001301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001301
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558717.1| PREDICTED: 40S ribosomal protein S29-like is...    81   5e-13
ref|XP_002302413.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_002313170.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-12
ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-12
gb|ABA98703.1| 40S ribosomal protein S29, putative, expressed [O...    79   2e-12

>ref|XP_003558717.1| PREDICTED: 40S ribosomal protein S29-like isoform 1 [Brachypodium
            distachyon] gi|357113858|ref|XP_003558718.1| PREDICTED:
            40S ribosomal protein S29-like isoform 2 [Brachypodium
            distachyon] gi|357152195|ref|XP_003576040.1| PREDICTED:
            40S ribosomal protein S29-like [Brachypodium distachyon]
            gi|357156017|ref|XP_003577315.1| PREDICTED: 40S ribosomal
            protein S29-like [Brachypodium distachyon]
            gi|326500328|dbj|BAK06253.1| predicted protein [Hordeum
            vulgare subsp. vulgare] gi|326509195|dbj|BAJ86990.1|
            predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326513424|dbj|BAK06952.1| predicted protein [Hordeum
            vulgare subsp. vulgare] gi|326531120|dbj|BAK04911.1|
            predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 56

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 40/81 (49%), Positives = 46/81 (56%)
 Frame = -2

Query: 1014 TNIWNAHPKNYGPGSRVLYDPSHRSCMES*IA*FFLFVLMFFCYRFICEIW*PGCGNSHG 835
            +N+WN+HPKNYGPGSRV                              C +    CGNSHG
Sbjct: 4    SNVWNSHPKNYGPGSRV------------------------------CRV----CGNSHG 29

Query: 834  IIRKYGLMCCRQCFRSNAKEI 772
            +IRKYGLMCCRQCFRSNAK+I
Sbjct: 30   LIRKYGLMCCRQCFRSNAKDI 50


>ref|XP_002302413.1| predicted protein [Populus trichocarpa]
            gi|224129898|ref|XP_002320698.1| predicted protein
            [Populus trichocarpa] gi|118482417|gb|ABK93131.1| unknown
            [Populus trichocarpa] gi|222844139|gb|EEE81686.1|
            predicted protein [Populus trichocarpa]
            gi|222861471|gb|EEE99013.1| predicted protein [Populus
            trichocarpa]
          Length = 56

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 41/81 (50%), Positives = 44/81 (54%)
 Frame = -2

Query: 1014 TNIWNAHPKNYGPGSRVLYDPSHRSCMES*IA*FFLFVLMFFCYRFICEIW*PGCGNSHG 835
            +NIWN+HPKNYGPGSR                               C +    CGN HG
Sbjct: 4    SNIWNSHPKNYGPGSRT------------------------------CRV----CGNPHG 29

Query: 834  IIRKYGLMCCRQCFRSNAKEI 772
            IIRKYGLMCCRQCFRSNAKEI
Sbjct: 30   IIRKYGLMCCRQCFRSNAKEI 50


>ref|XP_002313170.1| predicted protein [Populus trichocarpa] gi|222849578|gb|EEE87125.1|
            predicted protein [Populus trichocarpa]
          Length = 54

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 40/81 (49%), Positives = 44/81 (54%)
 Frame = -2

Query: 1014 TNIWNAHPKNYGPGSRVLYDPSHRSCMES*IA*FFLFVLMFFCYRFICEIW*PGCGNSHG 835
            +N+WN+HPKNYGPGSR                               C +    CGN HG
Sbjct: 4    SNVWNSHPKNYGPGSRT------------------------------CRV----CGNPHG 29

Query: 834  IIRKYGLMCCRQCFRSNAKEI 772
            IIRKYGLMCCRQCFRSNAKEI
Sbjct: 30   IIRKYGLMCCRQCFRSNAKEI 50


>ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|222846026|gb|EEE83573.1|
            predicted protein [Populus trichocarpa]
          Length = 56

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 40/81 (49%), Positives = 44/81 (54%)
 Frame = -2

Query: 1014 TNIWNAHPKNYGPGSRVLYDPSHRSCMES*IA*FFLFVLMFFCYRFICEIW*PGCGNSHG 835
            +N+WN+HPKNYGPGSR                               C +    CGN HG
Sbjct: 4    SNVWNSHPKNYGPGSRT------------------------------CRV----CGNPHG 29

Query: 834  IIRKYGLMCCRQCFRSNAKEI 772
            IIRKYGLMCCRQCFRSNAKEI
Sbjct: 30   IIRKYGLMCCRQCFRSNAKEI 50


>gb|ABA98703.1| 40S ribosomal protein S29, putative, expressed [Oryza sativa Japonica
            Group]
          Length = 103

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 39/81 (48%), Positives = 45/81 (55%)
 Frame = -2

Query: 1014 TNIWNAHPKNYGPGSRVLYDPSHRSCMES*IA*FFLFVLMFFCYRFICEIW*PGCGNSHG 835
            +N+WN+HPKNYGPGSRV                              C +    CGN HG
Sbjct: 4    SNVWNSHPKNYGPGSRV------------------------------CRV----CGNPHG 29

Query: 834  IIRKYGLMCCRQCFRSNAKEI 772
            +IRKYGLMCCRQCFRSNAK+I
Sbjct: 30   LIRKYGLMCCRQCFRSNAKDI 50


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