BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001185
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   191   2e-46
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   189   1e-45
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III ...   188   2e-45
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  191 bits (486), Expect = 2e-46
 Identities = 94/102 (92%), Positives = 97/102 (95%)
 Frame = -2

Query: 814 VLGEDEEKQEDVPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELDGETDPLEIA 635
           +LGE EEK E  PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL+GETDPLEIA
Sbjct: 41  LLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA 100

Query: 634 MKELTERKIPFTIRRYLPDGSYEDWGVNELIVEDSWKRQVGG 509
           MKEL ERKIPFTIRRYLPDGSYEDWGV+ELIVEDSWKRQVGG
Sbjct: 101 MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  189 bits (480), Expect = 1e-45
 Identities = 91/100 (91%), Positives = 97/100 (97%)
 Frame = -2

Query: 805 EDEEKQEDVPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELDGETDPLEIAMKE 626
           + E+K+E+ PVERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL+GETDPLEIAMKE
Sbjct: 43  DTEDKEEEQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 102

Query: 625 LTERKIPFTIRRYLPDGSYEDWGVNELIVEDSWKRQVGGD 506
           L ERKIPFTIRRYLPDGSYEDWGV+ELIVEDSWKRQVGGD
Sbjct: 103 LRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  189 bits (479), Expect = 1e-45
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -2

Query: 805 EDEEKQEDVPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELDGETDPLEIAMKE 626
           E E+K+E  PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVEL+GETDPLEIAMKE
Sbjct: 44  ETEDKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 103

Query: 625 LTERKIPFTIRRYLPDGSYEDWGVNELIVEDSWKRQVGGD 506
           L ERKIPFTIRRYLPDGSYEDWGV+ELIVEDSWKRQVGGD
Sbjct: 104 LRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_003625191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Medicago truncatula] gi|124360124|gb|ABN08140.1|
           DNA-directed RNA polymerase, 14 to 18 kDa subunit
           [Medicago truncatula] gi|355500206|gb|AES81409.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Medicago truncatula] gi|388508874|gb|AFK42503.1|
           unknown [Medicago truncatula]
           gi|388517849|gb|AFK46986.1| unknown [Medicago
           truncatula]
          Length = 145

 Score =  188 bits (478), Expect = 2e-45
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -2

Query: 805 EDEEKQEDVPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELDGETDPLEIAMKE 626
           E EEK++  PVERPR+TSKYMTKYERARILGTRALQISMNAPVMVEL+GETDPLEIAMKE
Sbjct: 46  ETEEKEDAAPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 105

Query: 625 LTERKIPFTIRRYLPDGSYEDWGVNELIVEDSWKRQVGGD 506
           L ERKIPFTIRRYLPDGSYEDWGV+ELIVEDSWKRQVGGD
Sbjct: 106 LRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  188 bits (477), Expect = 2e-45
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -2

Query: 805 EDEEKQEDVPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELDGETDPLEIAMKE 626
           E E+K+E  PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVEL+GETDPLEIAMKE
Sbjct: 44  ETEDKEEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 103

Query: 625 LTERKIPFTIRRYLPDGSYEDWGVNELIVEDSWKRQVGGD 506
           L ERKIPFTIRRYLPDGSYEDWGV+ELIVEDSWKRQVGGD
Sbjct: 104 LRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143