BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001179
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   267   3e-69
sp|P08706.2|RBS1_SOLLC RecName: Full=Ribulose bisphosphate carbo...   262   1e-67
sp|P32764.1|RBS3_SOLTU RecName: Full=Ribulose bisphosphate carbo...   261   1e-67
sp|P07179.2|RBS2A_SOLLC RecName: Full=Ribulose bisphosphate carb...   261   2e-67
emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subu...   261   2e-67

>emb|CAD11990.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Coffea arabica] gi|24940140|emb|CAD11991.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Coffea arabica]
          Length = 181

 Score =  267 bits (682), Expect = 3e-69
 Identities = 121/155 (78%), Positives = 137/155 (88%)
 Frame = +2

Query: 230 PFIGLKSAAAFPLAKKSVDITSLASNGGRVSCMQVYPPTGLKKYETLSYLPDLTEPQLLK 409
           PF GLK+A++FP++KKSVDITSLA+NGGRV CMQV+PP GLKKYETLSYLPDLT+ QLLK
Sbjct: 27  PFNGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPRGLKKYETLSYLPDLTDEQLLK 86

Query: 410 EIEYLIRSGWIPCIEFELKDGFPRRENNRSPGYYDGRYWTMWKLPMFGCTDATQVLKEIK 589
           EI+YLIRSGW+PC+EFEL+ GF  RE +RSPGYYDGRYWTMWKLPM+GCTDATQVL E+ 
Sbjct: 87  EIDYLIRSGWVPCLEFELEKGFVYREYHRSPGYYDGRYWTMWKLPMYGCTDATQVLNEVG 146

Query: 590 ELKKAYPQCWARIIGFDNVRQVQCIAFIVLKPDGF 694
           E  K YP CW RIIGFDNVRQVQCI+FI  KP GF
Sbjct: 147 ECLKEYPNCWVRIIGFDNVRQVQCISFIAAKPKGF 181


>sp|P08706.2|RBS1_SOLLC RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
           chloroplastic; Short=RuBisCO small subunit 1; AltName:
           Full=LESS 17; Flags: Precursor gi|170496|gb|AAA34188.1|
           ribulose-1,5-bisphophate carboxylase/ oxygenase small
           subunit [Solanum lycopersicum] gi|295814|emb|CAA29400.1|
           ribulose 1,5-bisphosphate carboxylase/oxygenase [Solanum
           lycopersicum]
          Length = 181

 Score =  262 bits (669), Expect = 1e-67
 Identities = 120/157 (76%), Positives = 137/157 (87%), Gaps = 2/157 (1%)
 Frame = +2

Query: 230 PFIGLKSAAAFPLAKKS--VDITSLASNGGRVSCMQVYPPTGLKKYETLSYLPDLTEPQL 403
           PF GLKSAA+FP+ KK+  VDITSLASNGGRV CMQV+PP  +KKYETLSYLPDL++ QL
Sbjct: 25  PFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQL 84

Query: 404 LKEIEYLIRSGWIPCIEFELKDGFPRRENNRSPGYYDGRYWTMWKLPMFGCTDATQVLKE 583
           L EIEYL+++GW+PC+EFE + GF  RENN SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 85  LSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAE 144

Query: 584 IKELKKAYPQCWARIIGFDNVRQVQCIAFIVLKPDGF 694
           ++E KKAYPQ W RIIGFDNVRQVQCI+FI  KP+GF
Sbjct: 145 VQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGF 181


>sp|P32764.1|RBS3_SOLTU RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
           chloroplastic; Short=RuBisCO small subunit 3; Flags:
           Precursor gi|21571|emb|CAA49417.1| ribulose bisphosphate
           carboxylase [Solanum tuberosum]
          Length = 181

 Score =  261 bits (668), Expect = 1e-67
 Identities = 118/157 (75%), Positives = 139/157 (88%), Gaps = 2/157 (1%)
 Frame = +2

Query: 230 PFIGLKSAAAFPLAKKS--VDITSLASNGGRVSCMQVYPPTGLKKYETLSYLPDLTEPQL 403
           PF GLKSAA+FP+ KK+  VDITSLASNGGRV CMQV+PP  +KKYETLSYLPDL++ QL
Sbjct: 25  PFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQL 84

Query: 404 LKEIEYLIRSGWIPCIEFELKDGFPRRENNRSPGYYDGRYWTMWKLPMFGCTDATQVLKE 583
           LKE+EYL+++GW+PC+EFE + GF  REN++SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 85  LKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 144

Query: 584 IKELKKAYPQCWARIIGFDNVRQVQCIAFIVLKPDGF 694
           ++E KKAYPQ W RIIGFDNVRQVQCI+FI  KP+G+
Sbjct: 145 VQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 181


>sp|P07179.2|RBS2A_SOLLC RecName: Full=Ribulose bisphosphate carboxylase small chain 2A,
           chloroplastic; Short=RuBisCO small subunit 2A; AltName:
           Full=LESS 5; Flags: Precursor gi|170498|gb|AAA34189.1|
           ribulose-1,5-bisphophate carboxylase/ oxygenase small
           subunit (EC 4.1.1.39) [Solanum lycopersicum]
           gi|4456641|emb|CAA29401.2| ribulose 1,5-bisphosphate
           carboxylase/oxygenase [Solanum lycopersicum]
          Length = 180

 Score =  261 bits (667), Expect = 2e-67
 Identities = 117/156 (75%), Positives = 138/156 (88%), Gaps = 1/156 (0%)
 Frame = +2

Query: 230 PFIGLKSAAAFPLAKK-SVDITSLASNGGRVSCMQVYPPTGLKKYETLSYLPDLTEPQLL 406
           PF GLKS+A FP+ KK ++DITS+ASNGGRVSCMQV+PP  +KKYETLSYLPDL++ QLL
Sbjct: 25  PFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLL 84

Query: 407 KEIEYLIRSGWIPCIEFELKDGFPRRENNRSPGYYDGRYWTMWKLPMFGCTDATQVLKEI 586
            EIEYL+++GW+PC+EFE + GF  RENN+SPGYYDGRYWTMWKLPMFGCTDATQVL E+
Sbjct: 85  SEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144

Query: 587 KELKKAYPQCWARIIGFDNVRQVQCIAFIVLKPDGF 694
           +E KKAYPQ W RIIGFDNVRQVQCI+FI  KP+G+
Sbjct: 145 QEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGY 180


>emb|CBY05833.1| Ribulose 1,5-bisphosphate carboxylase small subunit precursor
           [Coffea canephora] gi|336478343|emb|CBY89197.1| ribulose
           1,5-bisphosphate carboxylase small subunit precursor
           [Coffea canephora]
          Length = 181

 Score =  261 bits (667), Expect = 2e-67
 Identities = 119/155 (76%), Positives = 135/155 (87%)
 Frame = +2

Query: 230 PFIGLKSAAAFPLAKKSVDITSLASNGGRVSCMQVYPPTGLKKYETLSYLPDLTEPQLLK 409
           PF GLK+A++FP++KKSVDITSLA+NGGRV CMQV+PPTG  K ET SYLPDLT+ QLLK
Sbjct: 27  PFTGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPTGKLKNETFSYLPDLTDEQLLK 86

Query: 410 EIEYLIRSGWIPCIEFELKDGFPRRENNRSPGYYDGRYWTMWKLPMFGCTDATQVLKEIK 589
           EI+YLIR+GWIPC+EFEL+ G   RE +RSPGYYDGRYWTMWKLPMFGCTDATQVLKE++
Sbjct: 87  EIDYLIRNGWIPCLEFELEKGHVYREYHRSPGYYDGRYWTMWKLPMFGCTDATQVLKEVR 146

Query: 590 ELKKAYPQCWARIIGFDNVRQVQCIAFIVLKPDGF 694
           E  K YP CW RIIGFDNVRQVQCI+FI  KP GF
Sbjct: 147 ECLKEYPNCWVRIIGFDNVRQVQCISFIAAKPKGF 181