BLASTX nr result
ID: Cephaelis21_contig00001090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00001090
(2740 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003629895.1| Ubiquitin [Medicago truncatula] gi|355523917... 105 5e-25
gb|ABK42077.1| ubiquitin extension protein [Capsicum annuum] 105 5e-25
ref|NP_566095.1| ubiquitin-40S ribosomal protein S27a-2 [Arabido... 105 8e-25
ref|NP_191784.1| ubiquitin-40S ribosomal protein S27a-3 [Arabido... 105 8e-25
ref|XP_002876668.1| hypothetical protein ARALYDRAFT_486730 [Arab... 105 8e-25
>ref|XP_003629895.1| Ubiquitin [Medicago truncatula] gi|355523917|gb|AET04371.1|
Ubiquitin [Medicago truncatula]
Length = 232
Score = 105 bits (263), Expect(3) = 5e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +3
Query: 393 QSQIQNKKGIPPDQQRLIFAGKHLNNDRTPADYNI*KESTLYLVFRLRGGAKKHKKKSYT 572
+++IQ+K+GIPPDQQRLIFAGK L + RT ADYNI KESTL+LV RLRGGAKK KKK+YT
Sbjct: 104 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYT 163
Query: 573 NPKKIEHK 596
PKKI+HK
Sbjct: 164 KPKKIKHK 171
Score = 35.4 bits (80), Expect(3) = 5e-25
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 314 RMQIFVKTLMRKTITIEVESS 376
+MQIFVKTL KTIT+EVESS
Sbjct: 77 KMQIFVKTLTGKTITLEVESS 97
Score = 22.3 bits (46), Expect(3) = 5e-25
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 376 DTIDNVKAKSRTRK 417
DTIDNVKAK + ++
Sbjct: 98 DTIDNVKAKIQDKE 111
>gb|ABK42077.1| ubiquitin extension protein [Capsicum annuum]
Length = 179
Score = 105 bits (263), Expect(3) = 5e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +3
Query: 393 QSQIQNKKGIPPDQQRLIFAGKHLNNDRTPADYNI*KESTLYLVFRLRGGAKKHKKKSYT 572
+++IQ+K+GIPPDQQRLIFAGK L + RT ADYNI KESTL+LV RLRGGAKK KKK+YT
Sbjct: 50 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYT 109
Query: 573 NPKKIEHK 596
PKKI+HK
Sbjct: 110 KPKKIKHK 117
Score = 35.4 bits (80), Expect(3) = 5e-25
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 314 RMQIFVKTLMRKTITIEVESS 376
+MQIFVKTL KTIT+EVESS
Sbjct: 23 KMQIFVKTLTGKTITLEVESS 43
Score = 22.3 bits (46), Expect(3) = 5e-25
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 376 DTIDNVKAKSRTRK 417
DTIDNVKAK + ++
Sbjct: 44 DTIDNVKAKIQDKE 57
>ref|NP_566095.1| ubiquitin-40S ribosomal protein S27a-2 [Arabidopsis thaliana]
gi|334184963|ref|NP_001189768.1| ubiquitin-40S ribosomal
protein S27a-2 [Arabidopsis thaliana]
gi|297824801|ref|XP_002880283.1| hypothetical protein
ARALYDRAFT_904186 [Arabidopsis lyrata subsp. lyrata]
gi|302393741|sp|P59232.2|R27AB_ARATH RecName:
Full=Ubiquitin-40S ribosomal protein S27a-2; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=40S
ribosomal protein S27a-2; Flags: Precursor
gi|14030651|gb|AAK53000.1|AF375416_1 At2g47110/F14M4.6
[Arabidopsis thaliana] gi|166936|gb|AAA32907.1|
ubiquitin extension protein (UBQ6) [Arabidopsis
thaliana] gi|3522953|gb|AAC34235.1| ubiquitin extension
protein (UBQ6) [Arabidopsis thaliana]
gi|21593980|gb|AAM65909.1| ubiquitin extension protein
(UBQ6) [Arabidopsis thaliana] gi|22655410|gb|AAM98297.1|
At2g47110/F14M4.6 [Arabidopsis thaliana]
gi|23505779|gb|AAN28749.1| At2g47110/F14M4.6
[Arabidopsis thaliana] gi|297326122|gb|EFH56542.1|
hypothetical protein ARALYDRAFT_904186 [Arabidopsis
lyrata subsp. lyrata] gi|330255707|gb|AEC10801.1|
ubiquitin-40S ribosomal protein S27a-2 [Arabidopsis
thaliana] gi|330255708|gb|AEC10802.1| ubiquitin-40S
ribosomal protein S27a-2 [Arabidopsis thaliana]
Length = 157
Score = 105 bits (263), Expect(3) = 8e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +3
Query: 393 QSQIQNKKGIPPDQQRLIFAGKHLNNDRTPADYNI*KESTLYLVFRLRGGAKKHKKKSYT 572
+++IQ+K+GIPPDQQRLIFAGK L + RT ADYNI KESTL+LV RLRGGAKK KKK+YT
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYT 86
Query: 573 NPKKIEHK 596
PKKI+HK
Sbjct: 87 KPKKIKHK 94
Score = 34.7 bits (78), Expect(3) = 8e-25
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 317 MQIFVKTLMRKTITIEVESS 376
MQIFVKTL KTIT+EVESS
Sbjct: 1 MQIFVKTLTGKTITLEVESS 20
Score = 22.3 bits (46), Expect(3) = 8e-25
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 376 DTIDNVKAKSRTRK 417
DTIDNVKAK + ++
Sbjct: 21 DTIDNVKAKIQDKE 34
>ref|NP_191784.1| ubiquitin-40S ribosomal protein S27a-3 [Arabidopsis thaliana]
gi|302393706|sp|P59233.2|R27AC_ARATH RecName:
Full=Ubiquitin-40S ribosomal protein S27a-3; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=40S
ribosomal protein S27a-3; Flags: Precursor
gi|166934|gb|AAA32906.1| ubiquitin extension protein
(UBQ5) [Arabidopsis thaliana] gi|6899935|emb|CAB71885.1|
ubiquitin extension protein (UBQ5) [Arabidopsis
thaliana] gi|15529190|gb|AAK97689.1|
AT3g62250/T17J13_210 [Arabidopsis thaliana]
gi|21537196|gb|AAM61537.1| ubiquitin extension protein
UBQ5 [Arabidopsis thaliana] gi|22655050|gb|AAM98116.1|
At3g62250/T17J13_210 [Arabidopsis thaliana]
gi|110742096|dbj|BAE98979.1| ubiquitin extension protein
[Arabidopsis thaliana] gi|332646806|gb|AEE80327.1|
ubiquitin-40S ribosomal protein S27a-3 [Arabidopsis
thaliana]
Length = 157
Score = 105 bits (263), Expect(3) = 8e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +3
Query: 393 QSQIQNKKGIPPDQQRLIFAGKHLNNDRTPADYNI*KESTLYLVFRLRGGAKKHKKKSYT 572
+++IQ+K+GIPPDQQRLIFAGK L + RT ADYNI KESTL+LV RLRGGAKK KKK+YT
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYT 86
Query: 573 NPKKIEHK 596
PKKI+HK
Sbjct: 87 KPKKIKHK 94
Score = 34.7 bits (78), Expect(3) = 8e-25
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 317 MQIFVKTLMRKTITIEVESS 376
MQIFVKTL KTIT+EVESS
Sbjct: 1 MQIFVKTLTGKTITLEVESS 20
Score = 22.3 bits (46), Expect(3) = 8e-25
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 376 DTIDNVKAKSRTRK 417
DTIDNVKAK + ++
Sbjct: 21 DTIDNVKAKIQDKE 34
>ref|XP_002876668.1| hypothetical protein ARALYDRAFT_486730 [Arabidopsis lyrata subsp.
lyrata] gi|297322506|gb|EFH52927.1| hypothetical protein
ARALYDRAFT_486730 [Arabidopsis lyrata subsp. lyrata]
Length = 157
Score = 105 bits (263), Expect(3) = 8e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +3
Query: 393 QSQIQNKKGIPPDQQRLIFAGKHLNNDRTPADYNI*KESTLYLVFRLRGGAKKHKKKSYT 572
+++IQ+K+GIPPDQQRLIFAGK L + RT ADYNI KESTL+LV RLRGGAKK KKK+YT
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYT 86
Query: 573 NPKKIEHK 596
PKKI+HK
Sbjct: 87 KPKKIKHK 94
Score = 34.7 bits (78), Expect(3) = 8e-25
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 317 MQIFVKTLMRKTITIEVESS 376
MQIFVKTL KTIT+EVESS
Sbjct: 1 MQIFVKTLTGKTITLEVESS 20
Score = 22.3 bits (46), Expect(3) = 8e-25
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 376 DTIDNVKAKSRTRK 417
DTIDNVKAK + ++
Sbjct: 21 DTIDNVKAKIQDKE 34