BLASTX nr result

ID: Cephaelis21_contig00000762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000762
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   207   8e-52
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   206   2e-51
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   206   2e-51
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   200   1e-49

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  214 bits (544), Expect = 8e-54
 Identities = 111/174 (63%), Positives = 135/174 (77%)
 Frame = +1

Query: 1   GDSVHYKELVALMHHRQRLNPEQVATLVTCLKTLSGAAACIDIVHHRSLLDAIFSMSLWD 180
           GDS  Y +L+ ++HH++RL P++VA LVT LK LSGA +CID+VHH+SLL +IF MSLW+
Sbjct: 39  GDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98

Query: 181 YKSYAILDALVELVVSLAASSAKYVDLCLDMLVSNFAPPVHLLQFLKQPDGVTRKCQVLD 360
           Y    ++DAL+EL++SLAASS  Y+D  LDMLVSNF PP  LL FLKQP G+ RK QVL 
Sbjct: 99  YGP-DVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLS 157

Query: 361 RVHSALKDIADLVPLSPLRLEKIVRDRMPTVHWKEPKLLVMYVENMLMLESGAI 522
           RVHS LKDIADLVPL+P RL  IV  RMP V  KEP L+++YVENML LE GAI
Sbjct: 158 RVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEP-LIMIYVENMLRLEGGAI 210


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  207 bits (527), Expect = 8e-52
 Identities = 110/182 (60%), Positives = 133/182 (73%), Gaps = 8/182 (4%)
 Frame = +1

Query: 1   GDSVHYKELVALMHHRQRLNPEQVATLVTCLKTLSGAAACIDIVHHRSLLDAIFSMSLWD 180
           GDS  Y +L+ ++HH++RL P++VA LVT LK LSGA +CID+VHH+SLL +IF MSLW+
Sbjct: 39  GDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98

Query: 181 YKSYAILDALVELVVSLAASSAKYVDLCLDMLVSNFAPPVHLLQFLKQPDGVTRKCQVLD 360
           Y    ++DAL+EL++SLAASS  Y+D  LDMLVSNF PP  LL FLKQP G+ RK QVL 
Sbjct: 99  YGP-DVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLS 157

Query: 361 RVHSALKDIADLVPLSPLRLEKIVRDRMPTVHWKEPKLLV--------MYVENMLMLESG 516
           RVHS LKDIADLVPL+P RL  IV  RMP V  KEP   +        +YVENML LE G
Sbjct: 158 RVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGG 217

Query: 517 AI 522
           AI
Sbjct: 218 AI 219


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  206 bits (524), Expect = 2e-51
 Identities = 106/174 (60%), Positives = 133/174 (76%)
 Frame = +1

Query: 1   GDSVHYKELVALMHHRQRLNPEQVATLVTCLKTLSGAAACIDIVHHRSLLDAIFSMSLWD 180
           GD   Y +LV ++HHR RL+P++VA LVTCLK LSGA +CIDI+ H SLL AIF MSLWD
Sbjct: 39  GDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWD 98

Query: 181 YKSYAILDALVELVVSLAASSAKYVDLCLDMLVSNFAPPVHLLQFLKQPDGVTRKCQVLD 360
           Y S  ++DAL+EL++SLA S+ KYVD CLDMLV+NF PP   +  LK+P G+TRK +VL 
Sbjct: 99  YGSN-VMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLS 157

Query: 361 RVHSALKDIADLVPLSPLRLEKIVRDRMPTVHWKEPKLLVMYVENMLMLESGAI 522
           RVH+ALKDI+DLVPL+PLRLE+ V  +M  V + E  L  +YVENML LE GA+
Sbjct: 158 RVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNE-SLTTIYVENMLRLEKGAL 210


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  206 bits (524), Expect = 2e-51
 Identities = 106/174 (60%), Positives = 133/174 (76%)
 Frame = +1

Query: 1   GDSVHYKELVALMHHRQRLNPEQVATLVTCLKTLSGAAACIDIVHHRSLLDAIFSMSLWD 180
           GD   Y +LV ++HHR RL+P++VA LVTCLK LSGA +CIDI+ H SLL AIF MSLWD
Sbjct: 39  GDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWD 98

Query: 181 YKSYAILDALVELVVSLAASSAKYVDLCLDMLVSNFAPPVHLLQFLKQPDGVTRKCQVLD 360
           Y S  ++DAL+EL++SLA S+ KYVD CLDMLV+NF PP   +  LK+P G+TRK +VL 
Sbjct: 99  YGSN-VMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLS 157

Query: 361 RVHSALKDIADLVPLSPLRLEKIVRDRMPTVHWKEPKLLVMYVENMLMLESGAI 522
           RVH+ALKDI+DLVPL+PLRLE+ V  +M  V + E  L  +YVENML LE GA+
Sbjct: 158 RVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNE-SLTTIYVENMLRLEKGAL 210


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 627

 Score =  200 bits (508), Expect = 1e-49
 Identities = 105/175 (60%), Positives = 134/175 (76%)
 Frame = +1

Query: 1   GDSVHYKELVALMHHRQRLNPEQVATLVTCLKTLSGAAACIDIVHHRSLLDAIFSMSLWD 180
           GD  +Y ELV  +H ++ LNP++VA LVT LK LSGA + ID VHH SLL A+  MSLW+
Sbjct: 39  GDRENYDELVGYLHPKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWN 98

Query: 181 YKSYAILDALVELVVSLAASSAKYVDLCLDMLVSNFAPPVHLLQFLKQPDGVTRKCQVLD 360
           Y    I+DAL+EL++SLAAS+ KY+D CL+MLV +F PP +LL  L+Q +G+ RK +VL 
Sbjct: 99  Y-GIDIMDALLELIISLAASNGKYIDWCLEMLVKHFVPPFYLLDSLRQENGIDRKNKVLS 157

Query: 361 RVHSALKDIADLVPLSPLRLEKIVRDRMPTVHWKEPKLLVMYVENMLMLESGAIG 525
           RVH+ALK+IADLVPL+PLRL  IV  +MP+V  KE + +VMYVENML LESGAIG
Sbjct: 158 RVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETE-IVMYVENMLRLESGAIG 211


Top