BLASTX nr result
ID: Cephaelis21_contig00000761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00000761
(536 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr... 117 6e-30
emb|CBI37506.3| unnamed protein product [Vitis vinifera] 117 6e-30
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr... 106 4e-26
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr... 112 4e-26
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr... 112 4e-26
>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Vitis vinifera]
Length = 636
Score = 117 bits (293), Expect(2) = 6e-30
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 24/126 (19%)
Frame = +1
Query: 142 GDSVHYKELVALIHHRQHLNPEQVATLVTCLKTLSGAAACIDIIHHQSLLDA-------- 297
GDS Y +L+ ++HH++ L P++VA LVT LK LSGA +CID++HH+SLL +
Sbjct: 39 GDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98
Query: 298 ----------------AASSAKYIDLCLDMLVSNFAPPVHLLPFLKQPDGVTRKYQVLDC 429
AASS Y+D LDMLVSNF PP LL FLKQP G+ RK QVL
Sbjct: 99 YGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSR 158
Query: 430 VHSTLK 447
VHSTLK
Sbjct: 159 VHSTLK 164
Score = 38.5 bits (88), Expect(2) = 6e-30
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 441 IEDIADLVPLSPLRLQKIVRDRMPTAH*KEP 533
++DIADLVPL+P RL IV RMP KEP
Sbjct: 163 LKDIADLVPLAPSRLVPIVIQRMPNVFTKEP 193
>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 117 bits (293), Expect(2) = 6e-30
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 24/126 (19%)
Frame = +1
Query: 142 GDSVHYKELVALIHHRQHLNPEQVATLVTCLKTLSGAAACIDIIHHQSLLDA-------- 297
GDS Y +L+ ++HH++ L P++VA LVT LK LSGA +CID++HH+SLL +
Sbjct: 39 GDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWN 98
Query: 298 ----------------AASSAKYIDLCLDMLVSNFAPPVHLLPFLKQPDGVTRKYQVLDC 429
AASS Y+D LDMLVSNF PP LL FLKQP G+ RK QVL
Sbjct: 99 YGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSR 158
Query: 430 VHSTLK 447
VHSTLK
Sbjct: 159 VHSTLK 164
Score = 38.5 bits (88), Expect(2) = 6e-30
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 441 IEDIADLVPLSPLRLQKIVRDRMPTAH*KEP 533
++DIADLVPL+P RL IV RMP KEP
Sbjct: 163 LKDIADLVPLAPSRLVPIVIQRMPNVFTKEP 193
>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Glycine max]
Length = 628
Score = 106 bits (265), Expect(2) = 4e-26
Identities = 61/141 (43%), Positives = 81/141 (57%), Gaps = 24/141 (17%)
Frame = +1
Query: 97 QLYIGFQLIFLCWH*GDSVHYKELVALIHHRQHLNPEQVATLVTCLKTLSGAAACIDIIH 276
QL F+ + + GD +Y ELV +H ++HLNP++VA LVT LK LSGA + ID +H
Sbjct: 24 QLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAILVTTLKALSGAVSYIDSVH 83
Query: 277 HQSLLDA------------------------AASSAKYIDLCLDMLVSNFAPPVHLLPFL 384
H+SLL A A S+ KYID CL+MLV NF PP +LL L
Sbjct: 84 HESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWCLEMLVKNFVPPFYLLDSL 143
Query: 385 KQPDGVTRKYQVLDCVHSTLK 447
+Q +G+ RK +VL VH+ LK
Sbjct: 144 RQENGIDRKNKVLSRVHAALK 164
Score = 36.6 bits (83), Expect(2) = 4e-26
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 441 IEDIADLVPLSPLRLQKIVRDRMPTAH*KE 530
+++IADLVPL+PLRL IV +MP+ KE
Sbjct: 163 LKEIADLVPLAPLRLSPIVIQKMPSVFSKE 192
>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Cucumis sativus]
Length = 626
Score = 112 bits (281), Expect(2) = 4e-26
Identities = 61/126 (48%), Positives = 76/126 (60%), Gaps = 24/126 (19%)
Frame = +1
Query: 142 GDSVHYKELVALIHHRQHLNPEQVATLVTCLKTLSGAAACIDIIHHQSLLDA-------- 297
GD Y +LV +IHHR L+P++VA LVTCLK LSGA +CIDII H+SLL A
Sbjct: 39 GDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWD 98
Query: 298 ----------------AASSAKYIDLCLDMLVSNFAPPVHLLPFLKQPDGVTRKYQVLDC 429
A S+ KY+D CLDMLV+NF PP + LK+P G+TRK +VL
Sbjct: 99 YGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSR 158
Query: 430 VHSTLK 447
VH+ LK
Sbjct: 159 VHTALK 164
Score = 30.4 bits (67), Expect(2) = 4e-26
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +3
Query: 441 IEDIADLVPLSPLRLQKIVRDRM 509
++DI+DLVPL+PLRL++ V +M
Sbjct: 163 LKDISDLVPLAPLRLEQKVVHKM 185
>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
factor RRN3-like [Cucumis sativus]
Length = 625
Score = 112 bits (281), Expect(2) = 4e-26
Identities = 61/126 (48%), Positives = 76/126 (60%), Gaps = 24/126 (19%)
Frame = +1
Query: 142 GDSVHYKELVALIHHRQHLNPEQVATLVTCLKTLSGAAACIDIIHHQSLLDA-------- 297
GD Y +LV +IHHR L+P++VA LVTCLK LSGA +CIDII H+SLL A
Sbjct: 39 GDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWD 98
Query: 298 ----------------AASSAKYIDLCLDMLVSNFAPPVHLLPFLKQPDGVTRKYQVLDC 429
A S+ KY+D CLDMLV+NF PP + LK+P G+TRK +VL
Sbjct: 99 YGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSR 158
Query: 430 VHSTLK 447
VH+ LK
Sbjct: 159 VHTALK 164
Score = 30.4 bits (67), Expect(2) = 4e-26
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +3
Query: 441 IEDIADLVPLSPLRLQKIVRDRM 509
++DI+DLVPL+PLRL++ V +M
Sbjct: 163 LKDISDLVPLAPLRLEQKVVHKM 185