BLASTX nr result

ID: Cephaelis21_contig00000652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000652
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                91   1e-16
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    87   1e-15
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          84   1e-14
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...    82   5e-14
emb|CCH50954.1| T1.2 [Malus x robusta]                                 81   8e-14

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 37/62 (59%), Positives = 49/62 (79%)
 Frame = -2

Query: 300 KNNKAIGPDDMLIDAWKCLTKVGITWLTKIFSLIIHTKKLPKQWRKSVLIPLYKNKRDIQ 121
           K+ KAIGPDD+ I+ WK L + GITWLT +F+ I+ TKK+P +WR S L+P+YKNK D+Q
Sbjct: 573 KHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQ 632

Query: 120 NC 115
           NC
Sbjct: 633 NC 634


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = -2

Query: 300 KNNKAIGPDDMLIDAWKCLTKVGITWLTKIFSLIIHTKKLPKQWRKSVLIPLYKNKRDIQ 121
           K+ KA+GPDD+ I+ WK L + GITWL  +F+ I+ TKK+P +WR S L+P+YKNK D+Q
Sbjct: 177 KHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQ 236

Query: 120 NC 115
           NC
Sbjct: 237 NC 238


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 34/62 (54%), Positives = 50/62 (80%)
 Frame = -2

Query: 300 KNNKAIGPDDMLIDAWKCLTKVGITWLTKIFSLIIHTKKLPKQWRKSVLIPLYKNKRDIQ 121
           KN++A+GPD++ I+ WK L +  I WLTK+F+ I+ +KK+P +WRKS L+P+YKNK DIQ
Sbjct: 67  KNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQ 126

Query: 120 NC 115
           +C
Sbjct: 127 SC 128


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = -2

Query: 297 NNKAIGPDDMLIDAWKCLTKVGITWLTKIFSLIIHTKKLPKQWRKSVLIPLYKNKRDIQN 118
           N KA+GPD++ I+ WK L   GI WLTK+F+ I+ TKK+  +WR+S LIP+YKNK DIQ+
Sbjct: 31  NGKAVGPDNIPIEVWKSLGDRGIVWLTKLFNEIMKTKKMLDEWRRSTLIPIYKNKGDIQH 90

Query: 117 CS 112
           C+
Sbjct: 91  CA 92


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = -2

Query: 300 KNNKAIGPDDMLIDAWKCLTKVGITWLTKIFSLIIHTKKLPKQWRKSVLIPLYKNKRDIQ 121
           K+ KA+GP+D+ I  WK L + GITWLT +F+ I+  KK+  +WR S L+P+YKNK DIQ
Sbjct: 196 KHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQ 255

Query: 120 NC 115
           NC
Sbjct: 256 NC 257


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