BLASTX nr result

ID: Cephaelis21_contig00000486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000486
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   130   2e-28
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   1e-25
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   119   3e-25
dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativ...   114   9e-24

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  130 bits (326), Expect = 2e-28
 Identities = 59/80 (73%), Positives = 68/80 (85%)
 Frame = -3

Query: 242 KEKDGNNSVPILPWMRNPIDISTFDECPSNLVPVLDPRLEEALQKMGVTSLFPVQVAVWQ 63
           KE     +VP+LPWMR+PID+S F+ECP +L P LDPRLE AL+ MG +SLFPVQVAVWQ
Sbjct: 2   KEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQ 61

Query: 62  ETVGPGSFERDLCINSPTGS 3
           ETVGPG+FERDLCINSPTGS
Sbjct: 62  ETVGPGAFERDLCINSPTGS 81


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  123 bits (308), Expect = 3e-26
 Identities = 54/84 (64%), Positives = 69/84 (82%)
 Frame = -3

Query: 254 MEGAKEKDGNNSVPILPWMRNPIDISTFDECPSNLVPVLDPRLEEALQKMGVTSLFPVQV 75
           ME +     N +VP+LPWMR+P+D+S F+E P +++P LDPRL+ ALQ MG  +LFPVQ+
Sbjct: 1   MEESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQI 60

Query: 74  AVWQETVGPGSFERDLCINSPTGS 3
           AVWQET+GPG+FERDLCINSPTGS
Sbjct: 61  AVWQETIGPGAFERDLCINSPTGS 84


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  121 bits (303), Expect = 1e-25
 Identities = 50/79 (63%), Positives = 66/79 (83%)
 Frame = -3

Query: 239 EKDGNNSVPILPWMRNPIDISTFDECPSNLVPVLDPRLEEALQKMGVTSLFPVQVAVWQE 60
           +K     +P+LPWMR+P+D+S  +ECP  ++P+LD RL+ ALQ MG++SLFPVQ+AVWQE
Sbjct: 3   DKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQE 62

Query: 59  TVGPGSFERDLCINSPTGS 3
            +GPGSF+RDLCINSPTGS
Sbjct: 63  AIGPGSFDRDLCINSPTGS 81


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = -3

Query: 254 MEGAKEKDGNNSVPILPWMRNPIDISTFDECPSNLVPVLDPRLEEALQKMGVTSLFPVQV 75
           ME +K +  N  VP+LPWMR P+DI  F+EC  +LVP LDPRL+ AL+ MG TSLF VQV
Sbjct: 1   MEESKLEKKN--VPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQV 58

Query: 74  AVWQETVGPGSFERDLCINSPTGS 3
           AVWQET+GPG+FERDLCIN+PTGS
Sbjct: 59  AVWQETIGPGNFERDLCINAPTGS 82


>dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
           gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA
           helicase [Oryza sativa Japonica Group]
          Length = 517

 Score =  114 bits (286), Expect = 9e-24
 Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -3

Query: 242 KEKDGNNS--VPILPWMRNPIDISTFDECPSNLVPVLDPRLEEALQKMGVTSLFPVQVAV 69
           KE++G  S  VP LPWMRNP+DI +F  CP   +P LDPRL + LQ+MG+ S FPVQVA 
Sbjct: 4   KEEEGGPSSRVPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAA 63

Query: 68  WQETVGPGSFERDLCINSPTGS 3
           W ET+GPG+FERD+CINSPTGS
Sbjct: 64  WLETIGPGAFERDICINSPTGS 85


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