BLASTX nr result

ID: Cephaelis21_contig00000433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000433
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281825.1| PREDICTED: photosystem I reaction center sub...   296   8e-78
ref|XP_002516772.1| Photosystem I reaction center subunit II, ch...   286   5e-75
dbj|BAF80479.1| PSI reaction center subunit II [Citrus sinensis]      286   6e-75
emb|CAD89270.1| putative photosystem I reaction centre PSI-D sub...   285   1e-74
dbj|BAF80471.1| PSI reaction center subunit II [Citrus sinensis]...   285   1e-74

>ref|XP_002281825.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
           isoform 1 [Vitis vinifera]
           gi|359477510|ref|XP_003631987.1| PREDICTED: photosystem
           I reaction center subunit II, chloroplastic isoform 2
           [Vitis vinifera] gi|359477512|ref|XP_003631988.1|
           PREDICTED: photosystem I reaction center subunit II,
           chloroplastic isoform 3 [Vitis vinifera]
           gi|359477514|ref|XP_003631989.1| PREDICTED: photosystem
           I reaction center subunit II, chloroplastic isoform 4
           [Vitis vinifera] gi|147800882|emb|CAN62373.1|
           hypothetical protein VITISV_036477 [Vitis vinifera]
          Length = 204

 Score =  296 bits (757), Expect = 8e-78
 Identities = 157/221 (71%), Positives = 166/221 (75%), Gaps = 5/221 (2%)
 Frame = +1

Query: 214 MAMATQASLFTPTISSSSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANMGA 393
           MAMATQASLFTPT+S                                       K+++  
Sbjct: 1   MAMATQASLFTPTLSGDR-----------------VTVPWKSSSSLSFTTPKLPKSSVAP 43

Query: 394 RT-IRAMAEQA----APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWVSPKE 558
           RT IRAMAE+A    APVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKE
Sbjct: 44  RTTIRAMAEEAPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKE 103

Query: 559 QIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPK 738
           QIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPK
Sbjct: 104 QIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPK 163

Query: 739 DGVYPEKVNPGREPVGVNPRKIGNNINPIEVKFTGKNVYDL 861
           DGVYPEKVNPGR+ VGVN R IG N+NPIEVKFTGK  YDL
Sbjct: 164 DGVYPEKVNPGRQGVGVNFRSIGKNVNPIEVKFTGKQAYDL 204


>ref|XP_002516772.1| Photosystem I reaction center subunit II, chloroplast precursor,
           putative [Ricinus communis] gi|223543860|gb|EEF45386.1|
           Photosystem I reaction center subunit II, chloroplast
           precursor, putative [Ricinus communis]
          Length = 208

 Score =  286 bits (733), Expect = 5e-75
 Identities = 151/220 (68%), Positives = 163/220 (74%), Gaps = 4/220 (1%)
 Frame = +1

Query: 214 MAMATQASLFTPTISSSSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANMGA 393
           MAMATQASLFTPT  S+ +                                   K ++  
Sbjct: 1   MAMATQASLFTPTTLSTPKSSNHAIVPWKQSSFLSIPTAKPR------------KYSIAQ 48

Query: 394 RTIRAMAEQA----APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWVSPKEQ 561
           +TI+A A +     APVGFTPP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITW SPKEQ
Sbjct: 49  KTIKAAAAEGKTKEAPVGFTPPELDPSTPSPIFGGSTGGLLRKAQVEEFYVITWDSPKEQ 108

Query: 562 IFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKD 741
           IFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKD
Sbjct: 109 IFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKD 168

Query: 742 GVYPEKVNPGREPVGVNPRKIGNNINPIEVKFTGKNVYDL 861
           GVYPEKVNPGRE VG N R IG N++PIEVKFTGK VYDL
Sbjct: 169 GVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 208


>dbj|BAF80479.1| PSI reaction center subunit II [Citrus sinensis]
          Length = 209

 Score =  286 bits (732), Expect = 6e-75
 Identities = 149/222 (67%), Positives = 161/222 (72%), Gaps = 8/222 (3%)
 Frame = +1

Query: 220 MATQASLFTPTISSSSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANMGART 399
           MATQA LFTP+I+++                                       +MG RT
Sbjct: 1   MATQAGLFTPSITTTKTSKLPLNPWKPTSSFSFTSPKPLTF-------------SMGQRT 47

Query: 400 IRAMAEQA--------APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWVSPK 555
           +RA   +         APVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPK
Sbjct: 48  VRAAGAEGKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPK 107

Query: 556 EQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHP 735
           EQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHP
Sbjct: 108 EQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHP 167

Query: 736 KDGVYPEKVNPGREPVGVNPRKIGNNINPIEVKFTGKNVYDL 861
           KDGVYPEKVNPGR+ VG+N R IG N++PIEVKFTGK VYDL
Sbjct: 168 KDGVYPEKVNPGRQGVGLNYRSIGKNVSPIEVKFTGKQVYDL 209


>emb|CAD89270.1| putative photosystem I reaction centre PSI-D subunit precursor
           [Solanum tuberosum]
          Length = 207

 Score =  285 bits (730), Expect = 1e-74
 Identities = 154/224 (68%), Positives = 158/224 (70%), Gaps = 8/224 (3%)
 Frame = +1

Query: 214 MAMATQASLFTPTISSSSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANMGA 393
           MAMATQASLFTP +S                                             
Sbjct: 1   MAMATQASLFTPALSVPKSTAPWKQSLLSFSTPKQLKSTVSV-----------------T 43

Query: 394 RTIRAMAEQA--------APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWVS 549
           R IRAMAE+A        AP GFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW S
Sbjct: 44  RPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWES 103

Query: 550 PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYL 729
           PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYL
Sbjct: 104 PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYL 163

Query: 730 HPKDGVYPEKVNPGREPVGVNPRKIGNNINPIEVKFTGKNVYDL 861
           HPKDGVYPEKVNPGRE VG N R IG N + IEVKFTGK VYD+
Sbjct: 164 HPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 207


>dbj|BAF80471.1| PSI reaction center subunit II [Citrus sinensis]
           gi|157678950|dbj|BAF80473.1| PSI reaction center subunit
           II [Citrus sinensis]
          Length = 209

 Score =  285 bits (729), Expect = 1e-74
 Identities = 150/222 (67%), Positives = 160/222 (72%), Gaps = 8/222 (3%)
 Frame = +1

Query: 220 MATQASLFTPTISSSSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANMGART 399
           MATQA LFTP+I ++                                       +M  RT
Sbjct: 1   MATQAGLFTPSIITTKTSKLLLNPWKPTSSFSFTSPKPLTF-------------SMAQRT 47

Query: 400 IRAMAEQA--------APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWVSPK 555
           +RA A +         APVGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPK
Sbjct: 48  VRAAAAEEKTEAPTKEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPK 107

Query: 556 EQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHP 735
           EQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHP
Sbjct: 108 EQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHP 167

Query: 736 KDGVYPEKVNPGREPVGVNPRKIGNNINPIEVKFTGKNVYDL 861
           KDGVYPEKVNPGR+ VGVN R IG N++PIEVKFTGK VYDL
Sbjct: 168 KDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYDL 209