BLASTX nr result

ID: Cephaelis21_contig00000382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000382
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis...   161   2e-37
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   159   9e-37
emb|CBI37645.3| unnamed protein product [Vitis vinifera]              159   9e-37
gb|AET87126.1| high mobility group B2 protein [Brassica napus]        157   4e-36
ref|XP_002306429.1| high mobility group family [Populus trichoca...   157   6e-36

>ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
           gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like
           protein-like [Cucumis sativus]
           gi|63020536|gb|AAY26151.1| high mobility group protein
           [Cucumis sativus]
          Length = 146

 Score =  161 bits (408), Expect = 2e-37
 Identities = 76/97 (78%), Positives = 89/97 (91%), Gaps = 1/97 (1%)
 Frame = +2

Query: 374 DPNKPKRPASAFFVFMEEFRKQFKEKHPNNKSVAAVGKAGGEKWKAMSDAEKAPYQAKAD 553
           DPNKPKRPASAFFVFMEEFRKQ+K++HPNNKSVAAVGKAGG+KWK+MSDAEKAPY  KA+
Sbjct: 34  DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93

Query: 554 KRKVDYEKELQAYNKRLAD-GTGPDDEESDKSRSEVN 661
           KRK +Y K +QAYNKR+A+ G G ++EESDKS+SEVN
Sbjct: 94  KRKTEYNKSMQAYNKRIAEGGNGAEEEESDKSKSEVN 130


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  159 bits (403), Expect = 9e-37
 Identities = 75/97 (77%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = +2

Query: 374 DPNKPKRPASAFFVFMEEFRKQFKEKHPNNKSVAAVGKAGGEKWKAMSDAEKAPYQAKAD 553
           DPNKPKRPASAFFVFMEEFRKQ+KEKHP NKSV+ VGKAGG+KWK++S+AEKAPY AKA+
Sbjct: 43  DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAE 102

Query: 554 KRKVDYEKELQAYNKRLADG-TGPDDEESDKSRSEVN 661
           KRK +Y K +QAYNKR+A+G T  ++EESDKSRSEVN
Sbjct: 103 KRKTEYNKSMQAYNKRMAEGPTAAEEEESDKSRSEVN 139


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  159 bits (403), Expect = 9e-37
 Identities = 75/97 (77%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = +2

Query: 374 DPNKPKRPASAFFVFMEEFRKQFKEKHPNNKSVAAVGKAGGEKWKAMSDAEKAPYQAKAD 553
           DPNKPKRPASAFFVFMEEFRKQ+KEKHP NKSV+ VGKAGG+KWK++S+AEKAPY AKA+
Sbjct: 41  DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAE 100

Query: 554 KRKVDYEKELQAYNKRLADG-TGPDDEESDKSRSEVN 661
           KRK +Y K +QAYNKR+A+G T  ++EESDKSRSEVN
Sbjct: 101 KRKTEYNKSMQAYNKRMAEGPTAAEEEESDKSRSEVN 137


>gb|AET87126.1| high mobility group B2 protein [Brassica napus]
          Length = 145

 Score =  157 bits (397), Expect = 4e-36
 Identities = 73/96 (76%), Positives = 87/96 (90%)
 Frame = +2

Query: 374 DPNKPKRPASAFFVFMEEFRKQFKEKHPNNKSVAAVGKAGGEKWKAMSDAEKAPYQAKAD 553
           DPNKPKRPASAFFVFME+FR+ +K+ HPNNKSVAAVGKAGGEKWK++SD+EKAP+ AKAD
Sbjct: 34  DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93

Query: 554 KRKVDYEKELQAYNKRLADGTGPDDEESDKSRSEVN 661
           KRKV+YEK ++AYNK+L +G   D+EESDKS SEVN
Sbjct: 94  KRKVEYEKTMKAYNKKLEEGPKEDEEESDKSVSEVN 129


>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  157 bits (396), Expect = 6e-36
 Identities = 74/96 (77%), Positives = 87/96 (90%)
 Frame = +2

Query: 374 DPNKPKRPASAFFVFMEEFRKQFKEKHPNNKSVAAVGKAGGEKWKAMSDAEKAPYQAKAD 553
           DPNKPKRPASAFFVFME+FRKQ+KE HPNNKSVAAVGKAGG+KWK++S+AEKAPY AKA+
Sbjct: 35  DPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAE 94

Query: 554 KRKVDYEKELQAYNKRLADGTGPDDEESDKSRSEVN 661
           KRK +Y K++ AYNKRLA G   +D+ESDKS+SEVN
Sbjct: 95  KRKFEYNKDMAAYNKRLAGG---NDDESDKSKSEVN 127


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