BLASTX nr result

ID: Cephaelis21_contig00000374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000374
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   484   e-134
gb|ACF84273.1| unknown [Zea mays] gi|195619060|gb|ACG31360.1| ch...   481   e-133
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   480   e-133
gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3...   479   e-133
gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Cana...   478   e-133

>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  484 bits (1247), Expect = e-134
 Identities = 235/266 (88%), Positives = 247/266 (92%), Gaps = 3/266 (1%)
 Frame = -3

Query: 847 MAASTMPLSSSSFTGKAFEI--VQPELLGEGRISMRKTTSRPKP-SSASQWYGPDRVLYL 677
           MAAS+M LSS SF G+A ++     +LLGEGRI+MRKT  +PKP SS S WYGPDRV YL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 676 GPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 497
           GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 496 SRNGVKFGEAVWFKAGSQIFQEGGLNYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 317
           SRNGVKFGEAVWFKAGSQIF EGGL+YLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 316 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 137
           GPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 136 LENLADHIADPVNNNAWAYATNFAPG 59
           LENLADH+ADPVNNNAWAYATNF PG
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPG 266


>gb|ACF84273.1| unknown [Zea mays] gi|195619060|gb|ACG31360.1| chlorophyll a-b
           binding protein 2 [Zea mays]
          Length = 266

 Score =  481 bits (1237), Expect = e-133
 Identities = 229/265 (86%), Positives = 245/265 (92%), Gaps = 2/265 (0%)
 Frame = -3

Query: 847 MAASTMPLSSSSFTGKAFEIVQPELLGEGRISMRKTTSRPKPSSAS--QWYGPDRVLYLG 674
           MA+STM LSS++F GKA  +      GE R++MRKT ++ KP++AS   WYGPDRVLYLG
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSSAFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLG 60

Query: 673 PLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 494
           PLSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 493 RNGVKFGEAVWFKAGSQIFQEGGLNYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 314
           RNGVKFGEAVWFKAGSQIF EGGL+YLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 180

Query: 313 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 134
           PLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 133 ENLADHIADPVNNNAWAYATNFAPG 59
           ENLADHIADPVNNNAWAYATNF PG
Sbjct: 241 ENLADHIADPVNNNAWAYATNFVPG 265


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  480 bits (1235), Expect = e-133
 Identities = 234/266 (87%), Positives = 245/266 (92%), Gaps = 3/266 (1%)
 Frame = -3

Query: 847 MAASTMPLSSSSFTGKAFEIV--QPELLGEGRISMRKTTSRPKP-SSASQWYGPDRVLYL 677
           MAASTM LSS S  G+A ++     +LLGEGR++MRKT  RPKP SS S WYGPDRV YL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 676 GPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 497
           GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120

Query: 496 SRNGVKFGEAVWFKAGSQIFQEGGLNYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 317
           +RNGVKFGEAVWFKAG+QIF EGGL+YLGNPSLVHAQSILAIWA QVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 180

Query: 316 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 137
           GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 136 LENLADHIADPVNNNAWAYATNFAPG 59
           LENLADH+ADPVNNNAWAYATNF PG
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPG 266


>gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
          Length = 302

 Score =  479 bits (1233), Expect = e-133
 Identities = 235/284 (82%), Positives = 252/284 (88%), Gaps = 5/284 (1%)
 Frame = -3

Query: 895 LSSIH*IPS---PVSFQVIMAASTMPLSSSSFTGKAFEIVQPELLGEGRISMRKTTSRPK 725
           L S H  PS     S    MA+STM LSS++F GKA   V   L GE R++MRKT ++ K
Sbjct: 19  LKSSHSSPSHKTSASRSSAMASSTMALSSTAFAGKAVN-VPSSLFGEARVTMRKTAAKAK 77

Query: 724 P--SSASQWYGPDRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 551
           P  SS S WYGPDRVLYLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 78  PAASSGSPWYGPDRVLYLGPLSGAPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 137

Query: 550 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFQEGGLNYLGNPSLVHAQSILAI 371
           HSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIF EGGL+YLGNPSL+HAQSILAI
Sbjct: 138 HSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI 197

Query: 370 WACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA 191
           WACQV+LMGA+EGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLA
Sbjct: 198 WACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLA 257

Query: 190 MFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFAPG 59
           MFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNF PG
Sbjct: 258 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 301


>gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
          Length = 264

 Score =  478 bits (1231), Expect = e-133
 Identities = 232/265 (87%), Positives = 245/265 (92%), Gaps = 2/265 (0%)
 Frame = -3

Query: 847 MAASTMPLSSSSFTGKAFEIVQ--PELLGEGRISMRKTTSRPKPSSASQWYGPDRVLYLG 674
           MAASTM LSS +F GKA ++    PEL+G GR++MRKT +  KP S S WYGPDRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPSAPELMGNGRVNMRKTFN--KPPSGSPWYGPDRVKYLG 58

Query: 673 PLSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 494
           PLSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 59  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118

Query: 493 RNGVKFGEAVWFKAGSQIFQEGGLNYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 314
           RNGVKFGEAVWFKAG+QIF EGGL+YLGNPSL+HAQSILAIWACQVILMGAVEGYRIAGG
Sbjct: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGG 178

Query: 313 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 134
           PLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 179 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238

Query: 133 ENLADHIADPVNNNAWAYATNFAPG 59
           ENLADH+ADPVNNNAWAYATNF PG
Sbjct: 239 ENLADHLADPVNNNAWAYATNFVPG 263


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