BLASTX nr result

ID: Cephaelis21_contig00000340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000340
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510101.1| sigma factor sigb regulation protein rsbq, p...   161   1e-37
ref|XP_002302409.1| predicted protein [Populus trichocarpa] gi|2...   157   4e-36
gb|ABK95280.1| unknown [Populus trichocarpa]                          157   4e-36
gb|AAM65892.1| unknown [Arabidopsis thaliana]                         155   1e-35
ref|XP_002320690.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35

>ref|XP_002510101.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223550802|gb|EEF52288.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 266

 Score =  161 bits (408), Expect = 1e-37
 Identities = 82/135 (60%), Positives = 98/135 (72%)
 Frame = -1

Query: 611 DYDCGFQKDVVEEVFRNMESNFECWVGMHARVAVGGNCQEAIQEFSRTLFNIRPDIALFV 432
           DY  GF++  +E VF  ME+N+E WV   A +AVG +   A++EFSRTLFN+RPDI LFV
Sbjct: 130 DYHGGFERPDIENVFTAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFV 189

Query: 431 AKQTFGYDLRRRLGEVQVPCYIIQSAKDSSIPGSTAKYLEDHLGGRTIVEILNTEGHLPQ 252
           ++  F  DLR  LG V+VPC IIQ+AKD S+P S A+YL  HLGGR  VEIL TEGHLP 
Sbjct: 190 SRTVFNSDLRGILGLVKVPCCIIQTAKDVSVPASVAEYLRIHLGGRNTVEILRTEGHLPH 249

Query: 251 LSAPALLHQALNRAL 207
           LSAPALL Q L RAL
Sbjct: 250 LSAPALLAQVLRRAL 264


>ref|XP_002302409.1| predicted protein [Populus trichocarpa] gi|222844135|gb|EEE81682.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  157 bits (396), Expect = 4e-36
 Identities = 76/135 (56%), Positives = 100/135 (74%)
 Frame = -1

Query: 611 DYDCGFQKDVVEEVFRNMESNFECWVGMHARVAVGGNCQEAIQEFSRTLFNIRPDIALFV 432
           DY  GF+++ +E VF  ME+N+E WV   A +AVG +   A++EFSRTLFN+RPDI LFV
Sbjct: 130 DYHGGFEQEEIESVFVAMEANYEAWVKGFAPLAVGADVPAAVREFSRTLFNMRPDITLFV 189

Query: 431 AKQTFGYDLRRRLGEVQVPCYIIQSAKDSSIPGSTAKYLEDHLGGRTIVEILNTEGHLPQ 252
           ++  F  DLR  LG V+VPC +IQ++KD S+P S AKYL++HLGG+  VE+L TEGHLP 
Sbjct: 190 SRTVFNSDLRGILGLVKVPCCVIQTSKDVSVPASVAKYLKNHLGGKATVEMLRTEGHLPH 249

Query: 251 LSAPALLHQALNRAL 207
           LSAPA+L   + RAL
Sbjct: 250 LSAPAMLAPVIRRAL 264


>gb|ABK95280.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  157 bits (396), Expect = 4e-36
 Identities = 76/135 (56%), Positives = 100/135 (74%)
 Frame = -1

Query: 611 DYDCGFQKDVVEEVFRNMESNFECWVGMHARVAVGGNCQEAIQEFSRTLFNIRPDIALFV 432
           DY  GF+++ +E VF  ME+N+E WV   A +AVG +   A++EFSRTLFN+RPDI LFV
Sbjct: 31  DYHGGFEQEEIESVFVAMEANYEAWVKGFAPLAVGADVPAAVREFSRTLFNMRPDITLFV 90

Query: 431 AKQTFGYDLRRRLGEVQVPCYIIQSAKDSSIPGSTAKYLEDHLGGRTIVEILNTEGHLPQ 252
           ++  F  DLR  LG V+VPC +IQ++KD S+P S AKYL++HLGG+  VE+L TEGHLP 
Sbjct: 91  SRTVFNSDLRGILGLVKVPCCVIQTSKDVSVPASVAKYLKNHLGGKATVEMLRTEGHLPH 150

Query: 251 LSAPALLHQALNRAL 207
           LSAPA+L   + RAL
Sbjct: 151 LSAPAMLAPVIRRAL 165


>gb|AAM65892.1| unknown [Arabidopsis thaliana]
          Length = 267

 Score =  155 bits (392), Expect = 1e-35
 Identities = 79/135 (58%), Positives = 98/135 (72%)
 Frame = -1

Query: 611 DYDCGFQKDVVEEVFRNMESNFECWVGMHARVAVGGNCQEAIQEFSRTLFNIRPDIALFV 432
           DY  GF++  +E+VF  ME+N+E WV   A +AVG +   A++EFSRTLFN+RPDI+LFV
Sbjct: 131 DYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPAAVREFSRTLFNMRPDISLFV 190

Query: 431 AKQTFGYDLRRRLGEVQVPCYIIQSAKDSSIPGSTAKYLEDHLGGRTIVEILNTEGHLPQ 252
           ++  F  DLR  LG V+VP  +IQ+AKD S+P S A+YL  HLGG T VE L TEGHLPQ
Sbjct: 191 SRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLGGETTVETLKTEGHLPQ 250

Query: 251 LSAPALLHQALNRAL 207
           LSAPA L Q L RAL
Sbjct: 251 LSAPAQLAQFLRRAL 265


>ref|XP_002320690.1| predicted protein [Populus trichocarpa] gi|222861463|gb|EEE99005.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  155 bits (391), Expect = 1e-35
 Identities = 75/135 (55%), Positives = 99/135 (73%)
 Frame = -1

Query: 611 DYDCGFQKDVVEEVFRNMESNFECWVGMHARVAVGGNCQEAIQEFSRTLFNIRPDIALFV 432
           DY  GF+++ +E VF+ ME+N+E WV   A +AVG +   A++EF+RTLFN+RPDI LFV
Sbjct: 130 DYHGGFEQEEIESVFKAMEANYEAWVNGFAPLAVGADVPLAVREFTRTLFNMRPDITLFV 189

Query: 431 AKQTFGYDLRRRLGEVQVPCYIIQSAKDSSIPGSTAKYLEDHLGGRTIVEILNTEGHLPQ 252
           ++  F  DLR  LG V+VPC IIQ++KD S+P S A+YL++HLGG   VE L TEGHLP 
Sbjct: 190 SRTVFNSDLRGILGLVKVPCCIIQTSKDVSVPASVAEYLKNHLGGENTVETLRTEGHLPH 249

Query: 251 LSAPALLHQALNRAL 207
           LSAPA+L   + RAL
Sbjct: 250 LSAPAMLAPVIKRAL 264


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