BLASTX nr result

ID: Cephaelis21_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000253
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...    54   5e-07

>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score = 54.3 bits (129), Expect(2) = 5e-07
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +1

Query: 289 LEQVEVVYVPEKT*LDGDLTEEFRKVFEKFSFKDTAGSE 405
           +E+VE+ Y+PEK  LD  L E+FRKVFEKFSF + AG+E
Sbjct: 78  VEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAE 116



 Score = 24.3 bits (51), Expect(2) = 5e-07
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 497 KNEKKDETAQDAASK 541
           +NE KDE+AQ+A SK
Sbjct: 117 ENEDKDESAQNATSK 131


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