BLASTX nr result

ID: Cephaelis21_contig00000204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000204
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   212   7e-53
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   206   5e-51
ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   204   1e-50
emb|CAN77962.1| hypothetical protein VITISV_022948 [Vitis vinifera]   201   9e-50
ref|XP_004169501.1| PREDICTED: histone deacetylase 5-like, parti...   178   8e-43

>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi|222848818|gb|EEE86365.1|
            histone deacetylase [Populus trichocarpa]
          Length = 646

 Score =  212 bits (539), Expect = 7e-53
 Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 1/204 (0%)
 Frame = +3

Query: 6    EGMRKPCAGSVDKSRPKENRWSTFPHRLFFARDYTATWGPGGVAFLHPSSSSEDKAHMRL 185
            +GM+KPC GS+DK+ PKE  W  FPHRL+F RD T TWGPGGVAFLHP +S  +K +M L
Sbjct: 463  DGMKKPCTGSMDKNLPKEILWKNFPHRLYFGRDSTRTWGPGGVAFLHPDNSVGEKTYMCL 522

Query: 186  YRITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIPSFSMKNPLFDSVDLQSIEEKN 365
            Y+IT                               E +PS+ M +P+FD   LQSI+ K 
Sbjct: 523  YKITLEQFNDVLLQ---------------------ENVPSYQMNSPVFDLAALQSIKNKG 561

Query: 366  CIPAQAVKRGWYHNVLYLGKEEDIPILTFTCTLSDVDSFKSGKFPMCAPSKGYANTLVKG 545
             I  +  K GWY NV+YLG E DIPILT TC++SD +SFK G+FP+  PSK YANTLVKG
Sbjct: 562  SISLEVFKSGWYRNVVYLGNERDIPILTMTCSISDAESFKLGEFPLRRPSKEYANTLVKG 621

Query: 546  LTE-GMLSEEEAVAYIEEACTEEL 614
            L E G LSEEEA+AYIEEA ++ L
Sbjct: 622  LVESGQLSEEEAIAYIEEASSKPL 645


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
            gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
            putative [Ricinus communis]
          Length = 654

 Score =  206 bits (523), Expect = 5e-51
 Identities = 100/204 (49%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
 Frame = +3

Query: 6    EGMRKPCAGSVDKSRPKENRWSTFPHRLFFARDYTATWGPGGVAFLHPSSSSEDKAHMRL 185
            EGM+KPC+GS+D+  PK+  W  FPHRLFF R+ T TWG GGVAF+HP+SS+++K +  +
Sbjct: 472  EGMKKPCSGSMDRKPPKDILWRIFPHRLFFGRESTLTWGLGGVAFVHPASSADEKTYFCM 531

Query: 186  YRITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIPSFSMKNPLFDSVDLQSIEEKN 365
            YRIT                               E +P+++M +P+FDS  LQS+  + 
Sbjct: 532  YRITLEQFVDVLLQ---------------------ENVPNYNMSSPVFDSAALQSVINQG 570

Query: 366  CIPAQAVKRGWYHNVLYLGKEEDIPILTFTCTLSDVDSFKSGKFPMCAPSKGYANTLVKG 545
             +  +  KRGWYHNV+YLG+E++IPILT TC  S+V+SFKSG+ P+CAPSK YANTL+KG
Sbjct: 571  SMSLEVFKRGWYHNVVYLGQEQNIPILTMTCPPSNVESFKSGELPLCAPSKEYANTLIKG 630

Query: 546  LTE-GMLSEEEAVAYIEEACTEEL 614
            L E G LSEE+A+ YI+EA  + L
Sbjct: 631  LVEGGKLSEEQAIDYIKEASIKPL 654


>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
            gi|297733877|emb|CBI15124.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  204 bits (519), Expect = 1e-50
 Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 1/204 (0%)
 Frame = +3

Query: 6    EGMRKPCAGSVDKSRPKENRWSTFPHRLFFARDYTATWGPGGVAFLHPSSSSEDKAHMRL 185
            EGM K C+GSVD++ PKE  W T PHRLFF RD+++TWGPGGVAFL+P  +++D+A++ L
Sbjct: 465  EGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSTWGPGGVAFLNPEENNQDRAYICL 524

Query: 186  YRITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIPSFSMKNPLFDSVDLQSIEEKN 365
            YRIT                               E   S+ + +PLFD V L SI +K 
Sbjct: 525  YRITLEQFNDVLLQ---------------------ENASSYDISSPLFDLVALNSIADKQ 563

Query: 366  CIPAQAVKRGWYHNVLYLGKEEDIPILTFTCTLSDVDSFKSGKFPMCAPSKGYANTLVKG 545
             I  +  K GWY +VLYLGKE DIPILT TC LSDV++FKSG  PM APSK YANT+++G
Sbjct: 564  SISVE-FKSGWYRSVLYLGKECDIPILTLTCPLSDVEAFKSGDLPMSAPSKEYANTIIRG 622

Query: 546  LTEG-MLSEEEAVAYIEEACTEEL 614
            LTEG  LSEEEA+AYI+EA T+ L
Sbjct: 623  LTEGKQLSEEEAIAYIQEASTKPL 646


>emb|CAN77962.1| hypothetical protein VITISV_022948 [Vitis vinifera]
          Length = 345

 Score =  201 bits (512), Expect = 9e-50
 Identities = 106/204 (51%), Positives = 133/204 (65%), Gaps = 1/204 (0%)
 Frame = +3

Query: 6   EGMRKPCAGSVDKSRPKENRWSTFPHRLFFARDYTATWGPGGVAFLHPSSSSEDKAHMRL 185
           EGM K C+GSVD++ PKE  W T PHRLFF RD+++ WGPGGVAFL+P  +++D+A++ L
Sbjct: 164 EGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSXWGPGGVAFLNPEENNQDRAYICL 223

Query: 186 YRITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIPSFSMKNPLFDSVDLQSIEEKN 365
           YRIT                               E   S+ + +PLFD V L SI +K 
Sbjct: 224 YRITLEQFNDVLLQ---------------------ENASSYDISSPLFDLVALNSIADKQ 262

Query: 366 CIPAQAVKRGWYHNVLYLGKEEDIPILTFTCTLSDVDSFKSGKFPMCAPSKGYANTLVKG 545
            I  +  K GWY +VLYLGKE DIPILT TC LSDV++FKSG  PM APSK YANT+++G
Sbjct: 263 SISVE-FKSGWYRSVLYLGKECDIPILTXTCPLSDVEAFKSGDLPMSAPSKEYANTIIRG 321

Query: 546 LTEG-MLSEEEAVAYIEEACTEEL 614
           LTEG  LSEEEA+AYI+EA T+ L
Sbjct: 322 LTEGKQLSEEEAIAYIQEASTKPL 345


>ref|XP_004169501.1| PREDICTED: histone deacetylase 5-like, partial [Cucumis sativus]
          Length = 225

 Score =  178 bits (452), Expect = 8e-43
 Identities = 94/208 (45%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
 Frame = +3

Query: 6   EGMRKPCAGSVDKSRPKENRWSTFPHRLFFARDYTATWGPGGVAFLHPSSSSEDKAHMRL 185
           EGM++ C GS+D + PKE  W +FPHRLFF  ++T+TWG GGVAFL+P S+SE+K+++ L
Sbjct: 42  EGMKRSCTGSMDTTPPKEIMWKSFPHRLFFGHEHTSTWGQGGVAFLNPESNSEEKSYLCL 101

Query: 186 YRITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIPSFSMK-NPLFDSVDLQSIEEK 362
           YRIT                               E   S S+  NPL D  +L  +   
Sbjct: 102 YRITLEQFNDLLYQ---------------------ENNASSSLSDNPLLDIANLNKVTSS 140

Query: 363 NCIPAQAVK----RGWYHNVLYLGKEEDIPILTFTCTLSDVDSFKSGKFPMCAPSKGYAN 530
              P+ +V+    +GWYHN++YLGKE DIPILT TC+ SD++ FK GK P+C+P+K Y N
Sbjct: 141 ---PSNSVEVPTGKGWYHNLVYLGKERDIPILTMTCSHSDMEDFKDGKIPICSPAKEYVN 197

Query: 531 TLVKGLTEGMLSEEEAVAYIEEACTEEL 614
           TLV GL  G LS+EEA+ YI  A T+ L
Sbjct: 198 TLVLGLAGGPLSKEEALEYIRNASTKPL 225


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