BLASTX nr result
ID: Catharanthus23_contig00041068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00041068
(353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233668.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006338385.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] 64 2e-08
ref|NP_198751.1| pentatricopeptide repeat-containing protein [Ar... 64 3e-08
ref|XP_002305373.2| hypothetical protein POPTR_0004s12330g [Popu... 63 4e-08
ref|XP_002870791.1| pentatricopeptide repeat-containing protein ... 63 5e-08
ref|XP_006405638.1| hypothetical protein EUTSA_v10028267mg [Eutr... 62 8e-08
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006472181.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
gb|EMJ17232.1| hypothetical protein PRUPE_ppa014984mg [Prunus pe... 59 5e-07
gb|EXB38077.1| hypothetical protein L484_020998 [Morus notabilis] 59 7e-07
ref|XP_004230293.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_004306098.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_006433515.1| hypothetical protein CICLE_v10004048mg [Citr... 58 1e-06
ref|XP_006417598.1| hypothetical protein EUTSA_v10009682mg, part... 58 2e-06
gb|EPS71759.1| hypothetical protein M569_02994, partial [Genlise... 58 2e-06
ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Caps... 58 2e-06
emb|CBI39579.3| unnamed protein product [Vitis vinifera] 58 2e-06
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
>ref|XP_004233668.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Solanum lycopersicum]
Length = 680
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNYILL IY+A+GRW+DAE +R M + L+K+PAQSV+
Sbjct: 634 LEPENTGNYILLGKIYSAVGRWKDAENVRLLMNEVGLIKAPAQSVI 679
>ref|XP_006338385.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Solanum tuberosum]
Length = 680
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
+EP NTGNYILL IY+A+GRW+DAE +R M + L+K+PAQSV+
Sbjct: 634 VEPENTGNYILLGKIYSAVGRWKDAENVRLLMNEIGLIKAPAQSVI 679
>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
protein product [Vitis vinifera]
Length = 676
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIY+A+GRW DAE +R M N+ L K+PA S++
Sbjct: 626 LEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671
>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIY+A+GRW DAE +R M N+ L K+PA S++
Sbjct: 626 LEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671
>ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39350 gi|10177683|dbj|BAB11009.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIYAA+GRW+D EK+R M+N+ L K P S +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
>ref|XP_002305373.2| hypothetical protein POPTR_0004s12330g [Populus trichocarpa]
gi|550340892|gb|EEE85884.2| hypothetical protein
POPTR_0004s12330g [Populus trichocarpa]
Length = 672
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL +YAA+GRWEDAE +R RM ++ L K+PA S++
Sbjct: 620 LEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 665
>ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316627|gb|EFH47050.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 674
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIYAA+GRW+D EK+R M+N+ L K P S +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTI 667
>ref|XP_006405638.1| hypothetical protein EUTSA_v10028267mg [Eutrema salsugineum]
gi|557106776|gb|ESQ47091.1| hypothetical protein
EUTSA_v10028267mg [Eutrema salsugineum]
Length = 666
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIYAA+GRW+D EK+R M+N L K PA S +
Sbjct: 621 LEPENTGNYVLLANIYAALGRWKDMEKVREMMENDGLRKKPAHSTI 666
>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQS 221
LEP +TGNYILL NIYAA+GRW+DAE +R M + L K+PAQS
Sbjct: 659 LEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQS 702
>ref|XP_006472181.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Citrus sinensis]
Length = 484
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP+N+GNY+LL NIYA GRW+DAEK+R M+ + KSP QS++
Sbjct: 438 LEPWNSGNYVLLSNIYAEGGRWDDAEKLRMWMREKNVKKSPGQSLI 483
>gb|EMJ17232.1| hypothetical protein PRUPE_ppa014984mg [Prunus persica]
Length = 581
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+L+ IYAA+GRW+DAE +R M + L K+PA S++
Sbjct: 531 LEPENTGNYVLMAKIYAAVGRWKDAENLRHMMNEIGLRKTPAHSLV 576
>gb|EXB38077.1| hypothetical protein L484_020998 [Morus notabilis]
Length = 667
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTG Y+L+ IY+A+GRW+DAE +R M ++L KSPA S++
Sbjct: 617 LEPENTGTYVLMAKIYSAVGRWKDAENVRRMMSEIRLRKSPAHSLI 662
>ref|XP_004230293.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Solanum lycopersicum]
Length = 484
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP+N+GNY+LL NIYA G+WED EK+R M + K+P QS++
Sbjct: 438 LEPWNSGNYVLLSNIYADRGKWEDVEKVRVLMSGNSIKKAPGQSII 483
>ref|XP_004306098.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
L+P NTGNY+L+ IYAA GRW+DAE +R M + L KSPA S++
Sbjct: 623 LDPENTGNYVLMAKIYAAAGRWKDAENVRYTMNEIGLRKSPAHSLV 668
>ref|XP_006433515.1| hypothetical protein CICLE_v10004048mg [Citrus clementina]
gi|557535637|gb|ESR46755.1| hypothetical protein
CICLE_v10004048mg [Citrus clementina]
Length = 484
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP+N+GNY+LL NIYA GRW+DAE +R M+ + KSP QS++
Sbjct: 438 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 483
>ref|XP_006417598.1| hypothetical protein EUTSA_v10009682mg, partial [Eutrema
salsugineum] gi|557095369|gb|ESQ35951.1| hypothetical
protein EUTSA_v10009682mg, partial [Eutrema salsugineum]
Length = 483
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
+EP N+GNY+LL N+YA GRWED EK+R MK L KS QS +
Sbjct: 434 IEPGNSGNYVLLSNLYAEEGRWEDVEKVRAMMKKKSLRKSTGQSTI 479
>gb|EPS71759.1| hypothetical protein M569_02994, partial [Genlisea aurea]
Length = 642
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/46 (54%), Positives = 38/46 (82%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL NIY+A+GR++DA ++R M ++ L+K+PA S++
Sbjct: 597 LEPRNTGNYVLLGNIYSAVGRFDDAVRVRVMMDSVGLVKAPANSLV 642
>ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Capsella rubella]
gi|482553767|gb|EOA17960.1| hypothetical protein
CARUB_v10006375mg [Capsella rubella]
Length = 673
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP NTGNY+LL N+Y A+GRW+D EK+R M+++ L K P S +
Sbjct: 621 LEPENTGNYVLLANMYGALGRWKDMEKVRNMMEDVGLRKKPGHSTV 666
>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 57.8 bits (138), Expect = 2e-06
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP+N+GNY+LL N+YA G+W++ EK+R MK + K+P QS++
Sbjct: 412 LEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 457
>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 57.8 bits (138), Expect = 2e-06
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -2
Query: 352 LEPYNTGNYILL*NIYAAIGRWEDAEKIRCRMKNLQLLKSPAQSVL 215
LEP+N+GNY+LL N+YA G+W++ EK+R MK + K+P QS++
Sbjct: 438 LEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483