BLASTX nr result
ID: Catharanthus23_contig00041027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00041027
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containi... 146 3e-33
ref|XP_006477459.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_006440604.1| hypothetical protein CICLE_v10018999mg [Citr... 144 1e-32
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
gb|EOY21868.1| Pentatricopeptide repeat superfamily protein isof... 141 8e-32
gb|EOY21867.1| Pentatricopeptide repeat superfamily protein isof... 141 8e-32
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ... 141 8e-32
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
ref|XP_004235997.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_006364594.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar... 140 2e-31
gb|ESW27301.1| hypothetical protein PHAVU_003G189800g [Phaseolus... 139 3e-31
ref|XP_006292869.1| hypothetical protein CARUB_v10019129mg [Caps... 139 5e-31
ref|XP_002304264.2| hypothetical protein POPTR_0003s07210g [Popu... 138 9e-31
ref|XP_004974732.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 136 3e-30
ref|XP_006404369.1| hypothetical protein EUTSA_v10010230mg [Eutr... 135 7e-30
gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis] 134 1e-29
ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group] g... 132 5e-29
>ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cicer arietinum]
Length = 633
Score = 146 bits (368), Expect = 3e-33
Identities = 70/91 (76%), Positives = 79/91 (86%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L GRAGLLDKAY+LI+ ME KPD+ VWRTLLGACRIH + LGERV+ HLIELKA+EAGD
Sbjct: 407 LFGRAGLLDKAYQLITSMEVKPDSTVWRTLLGACRIHGDVALGERVIGHLIELKAQEAGD 466
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G WEKV ++RKLM+EK IQT
Sbjct: 467 YVLLLNIYSSAGQWEKVAEVRKLMREKSIQT 497
>ref|XP_006477459.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Citrus sinensis]
Length = 580
Score = 144 bits (363), Expect = 1e-32
Identities = 65/91 (71%), Positives = 81/91 (89%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY+LI+ M KPD+ +WRTLLGACRIHK+ LGERV+EHLIELKA+E+GD
Sbjct: 354 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 413
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLN+YSS+GDWEKV ++R+ M EK +QT
Sbjct: 414 YVLLLNLYSSVGDWEKVKELREFMNEKGLQT 444
>ref|XP_006440604.1| hypothetical protein CICLE_v10018999mg [Citrus clementina]
gi|557542866|gb|ESR53844.1| hypothetical protein
CICLE_v10018999mg [Citrus clementina]
Length = 745
Score = 144 bits (363), Expect = 1e-32
Identities = 65/91 (71%), Positives = 81/91 (89%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY+LI+ M KPD+ +WRTLLGACRIHK+ LGERV+EHLIELKA+E+GD
Sbjct: 519 LLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIELKAQESGD 578
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLN+YSS+GDWEKV ++R+ M EK +QT
Sbjct: 579 YVLLLNLYSSVGDWEKVKELREFMNEKGLQT 609
>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 142 bits (358), Expect = 5e-32
Identities = 67/91 (73%), Positives = 80/91 (87%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY+LI M KPD+ +WRTLLGACRIH++A LGERV+ HLIELKA+EAGD
Sbjct: 417 LLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGD 476
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS+G+W+KV +RK MKEK IQT
Sbjct: 477 YVLLLNIYSSVGNWDKVTDLRKFMKEKGIQT 507
>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 142 bits (357), Expect = 6e-32
Identities = 67/91 (73%), Positives = 80/91 (87%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAG+LD+AYELI ME +PDA +WRTLLGACRIH + LGER+VEHLIELK++EAGD
Sbjct: 376 LLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGD 435
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G+W+KV ++RKLMKEK I T
Sbjct: 436 YVLLLNIYSSAGNWDKVTELRKLMKEKGIYT 466
>gb|EOY21868.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao]
Length = 625
Score = 141 bits (356), Expect = 8e-32
Identities = 68/91 (74%), Positives = 78/91 (85%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY++I M KPDA +WRTLLGACRIH + LGERV+EHLIELKA+EAGD
Sbjct: 414 LLGRAGLLDQAYQVIISMGVKPDATIWRTLLGACRIHGHVTLGERVIEHLIELKAQEAGD 473
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G WEKV ++RK MKEK IQT
Sbjct: 474 YVLLLNIYSSDGKWEKVTELRKFMKEKGIQT 504
>gb|EOY21867.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 640
Score = 141 bits (356), Expect = 8e-32
Identities = 68/91 (74%), Positives = 78/91 (85%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY++I M KPDA +WRTLLGACRIH + LGERV+EHLIELKA+EAGD
Sbjct: 414 LLGRAGLLDQAYQVIISMGVKPDATIWRTLLGACRIHGHVTLGERVIEHLIELKAQEAGD 473
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G WEKV ++RK MKEK IQT
Sbjct: 474 YVLLLNIYSSDGKWEKVTELRKFMKEKGIQT 504
>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323404|gb|EFH53825.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 591
Score = 141 bits (356), Expect = 8e-32
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRA LLDKAY LI ME KPD+ +WRTLLGACR+H N LGERV+ HLIE KAEEAGD
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGD 423
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLN YSS+G WEKV ++R LMK+KRIQT
Sbjct: 424 YVLLLNTYSSVGKWEKVTELRSLMKKKRIQT 454
>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 141 bits (355), Expect = 1e-31
Identities = 68/91 (74%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLDKAY+LI M KPD+ +WRTLLGACRIH + LGERV+ HLIELKA+EAGD
Sbjct: 353 LLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGD 412
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G WEKV ++RKLMK K IQT
Sbjct: 413 YVLLLNIYSSAGHWEKVAEVRKLMKNKSIQT 443
>ref|XP_004235997.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Solanum lycopersicum]
Length = 621
Score = 140 bits (354), Expect = 1e-31
Identities = 65/91 (71%), Positives = 80/91 (87%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
LMGRAG++D+AY LI+ M+ KPDA +WRTLLGACRIH A LGE+V+E LIELKA+EAGD
Sbjct: 395 LMGRAGMVDEAYNLINSMKVKPDATIWRTLLGACRIHHQAELGEQVIERLIELKAQEAGD 454
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS+GDW KV+ +RK+MK++ IQT
Sbjct: 455 YVLLLNIYSSLGDWGKVVNVRKMMKDRGIQT 485
>ref|XP_006364594.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Solanum tuberosum]
Length = 621
Score = 140 bits (353), Expect = 2e-31
Identities = 64/91 (70%), Positives = 80/91 (87%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
LMGRAG++D+AY LI+ M+ KPDA +WRTLLGACRIH A LGE+V+E LIELKA+EAGD
Sbjct: 395 LMGRAGMVDEAYNLINSMKVKPDATIWRTLLGACRIHHQADLGEQVIERLIELKAQEAGD 454
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
Y+LLLNIYSS+GDW KV+ +RK+MK++ IQT
Sbjct: 455 YILLLNIYSSLGDWGKVINVRKMMKDRGIQT 485
>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g47530 gi|6522536|emb|CAB61979.1| putative protein
[Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 140 bits (352), Expect = 2e-31
Identities = 66/91 (72%), Positives = 76/91 (83%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRA LLDKAY LI ME KPD+ +WRTLLGACR+H + LGERV+ HLIELKAEEAGD
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGD 423
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLN YS++G WEKV ++R LMKEKRI T
Sbjct: 424 YVLLLNTYSTVGKWEKVTELRSLMKEKRIHT 454
>gb|ESW27301.1| hypothetical protein PHAVU_003G189800g [Phaseolus vulgaris]
Length = 579
Score = 139 bits (351), Expect = 3e-31
Identities = 66/91 (72%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GR GLLDKAY+LI M KPD+ +WRTLLGACRIH + LGE+V+ HLIELKA+EAGD
Sbjct: 353 LLGRVGLLDKAYQLIMSMVVKPDSTIWRTLLGACRIHGHVTLGEQVIGHLIELKAQEAGD 412
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G WEKV ++RKLMK+K IQT
Sbjct: 413 YVLLLNIYSSAGHWEKVAEVRKLMKDKAIQT 443
>ref|XP_006292869.1| hypothetical protein CARUB_v10019129mg [Capsella rubella]
gi|482561576|gb|EOA25767.1| hypothetical protein
CARUB_v10019129mg [Capsella rubella]
Length = 589
Score = 139 bits (349), Expect = 5e-31
Identities = 66/91 (72%), Positives = 75/91 (82%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRA LDKAY LI ME KPD+ +WRTLLGACR+H LGERV+ H+IELKAEEAGD
Sbjct: 362 LLGRARQLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGYVELGERVISHIIELKAEEAGD 421
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLN YSS+G WEKV ++R LMKEKRIQT
Sbjct: 422 YVLLLNTYSSVGKWEKVTELRSLMKEKRIQT 452
>ref|XP_002304264.2| hypothetical protein POPTR_0003s07210g [Populus trichocarpa]
gi|550342611|gb|EEE79243.2| hypothetical protein
POPTR_0003s07210g [Populus trichocarpa]
Length = 636
Score = 138 bits (347), Expect = 9e-31
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAG L +AY+LI M KPD+ +WRTLLGACRIH+N ILGE VVEHLIELKA+EAGD
Sbjct: 410 LLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHRNVILGEHVVEHLIELKAQEAGD 469
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLL N+YSS+ +W+KV ++RK MKEK IQT
Sbjct: 470 YVLLFNLYSSVDNWKKVTELRKFMKEKGIQT 500
>ref|XP_004974732.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Setaria italica]
Length = 533
Score = 136 bits (342), Expect = 3e-30
Identities = 64/92 (69%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISR-MEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAG 177
LMGRAGLLD+AYEL+++ M PDA +WRTLLGACRIH + LGERV+ HLIELKA++AG
Sbjct: 306 LMGRAGLLDEAYELVTKEMRVAPDATIWRTLLGACRIHGHVDLGERVITHLIELKAQQAG 365
Query: 178 DYVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
DYVLLLN Y+++GDW KV ++RKLM+EK IQT
Sbjct: 366 DYVLLLNTYAAVGDWNKVAEVRKLMREKGIQT 397
>ref|XP_006404369.1| hypothetical protein EUTSA_v10010230mg [Eutrema salsugineum]
gi|557105488|gb|ESQ45822.1| hypothetical protein
EUTSA_v10010230mg [Eutrema salsugineum]
Length = 590
Score = 135 bits (339), Expect = 7e-30
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRA LLD+AY L+ ME KPD+ +WRTLLGACR+ N LGERV+ HLIELKAEEAGD
Sbjct: 363 LLGRARLLDRAYGLVQSMEMKPDSTIWRTLLGACRVQGNVELGERVISHLIELKAEEAGD 422
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
Y+LLLN YSS+G WEKV ++R LMKE++I T
Sbjct: 423 YILLLNTYSSVGKWEKVTELRSLMKERKIHT 453
>gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis]
Length = 640
Score = 134 bits (338), Expect = 1e-29
Identities = 62/91 (68%), Positives = 77/91 (84%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISRMEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAGD 180
L+GRAGLLD+AY LI M+ KPD +WRTLLGACRIH + LGERV+ HLIELKA+EAGD
Sbjct: 414 LLGRAGLLDRAYRLIMSMDVKPDPEIWRTLLGACRIHGHVNLGERVIGHLIELKAQEAGD 473
Query: 181 YVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
YVLLLNIYSS G+W+KV ++RK +K++ +QT
Sbjct: 474 YVLLLNIYSSAGNWDKVTELRKFLKDEALQT 504
>ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 134 bits (336), Expect = 2e-29
Identities = 63/92 (68%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISR-MEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAG 177
LMGRAGLLD+AYEL+ + M+ PDA +WRTLLGACRIH + LGE+V+ HLIELKA++AG
Sbjct: 657 LMGRAGLLDEAYELVVKEMKVAPDATIWRTLLGACRIHGHVDLGEKVISHLIELKAQQAG 716
Query: 178 DYVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
DYVLLLN Y++ GDWEKV ++RKLM+E IQT
Sbjct: 717 DYVLLLNTYAAAGDWEKVAEVRKLMRENEIQT 748
>ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|42409483|dbj|BAD09839.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113623845|dbj|BAF23790.1|
Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 132 bits (332), Expect = 5e-29
Identities = 64/92 (69%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LMGRAGLLDKAYELISR-MEAKPDAAVWRTLLGACRIHKNAILGERVVEHLIELKAEEAG 177
LMGRAGLLD+AYEL+ + M PDA +WRTLLGACRIH + LGERV+ HLIELKA++AG
Sbjct: 374 LMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAG 433
Query: 178 DYVLLLNIYSSIGDWEKVMKIRKLMKEKRIQT 273
DYVLLLN Y+++ DW KV ++RKLMKEK IQT
Sbjct: 434 DYVLLLNTYAAVEDWGKVAEVRKLMKEKGIQT 465