BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00040460
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi...   142   6e-32
ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   137   1e-30
ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citr...   137   2e-30
ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containi...   132   6e-29
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...   131   8e-29
gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus...   129   4e-28
gb|EMJ23067.1| hypothetical protein PRUPE_ppa018370mg, partial [...   125   4e-27
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   125   4e-27
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   123   3e-26
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...   115   8e-24
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...   115   8e-24
gb|EPS63937.1| hypothetical protein M569_10844, partial [Genlise...   114   2e-23
ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Caps...   113   3e-23
ref|XP_004240612.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_004507163.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_004955129.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. l...   109   3e-22
ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22

>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum tuberosum]
          Length = 599

 Score =  142 bits (357), Expect = 6e-32
 Identities = 66/102 (64%), Positives = 84/102 (82%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           +VE YACYIDLLG+AGKLEDA +V+S+M  +P+ ++WS L+S+CK HGRLEVA+ LA RL
Sbjct: 488 TVELYACYIDLLGRAGKLEDASEVISRMPIKPTNRVWSSLISSCKLHGRLEVAERLAHRL 547

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLKN 308
            K EPENAA Y LLS++YAES+NW  VE VRR M++RKL K+
Sbjct: 548 TKSEPENAANYALLSLVYAESENWPGVEDVRREMRERKLRKS 589


>ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum lycopersicum]
          Length = 603

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/102 (65%), Positives = 83/102 (81%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           +VE YACYIDLLG+AGKLEDA +V+S+M  +P+ +IWS L+S+CK HGRLEVA+ LA +L
Sbjct: 489 TVELYACYIDLLGRAGKLEDASEVISRMPIKPTNRIWSSLISSCKLHGRLEVAERLAHKL 548

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLKN 308
            K EPENAA Y LLS++YAES NW  VE VRR MK+RKL K+
Sbjct: 549 AKSEPENAANYALLSLVYAESGNWPGVEDVRRDMKERKLRKS 590


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/101 (66%), Positives = 80/101 (79%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           +VEHYAC +DLLGK+GK++DA D++  M  +PST IWS LVSACK HGRLE+A+ LAQ L
Sbjct: 467 TVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQEL 526

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           IK EP NAA +TLLSMIYAES NW AVE VRR M+ + L K
Sbjct: 527 IKSEPSNAANHTLLSMIYAESGNWFAVEDVRRLMRVQGLSK 567


>ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citrus clementina]
           gi|557556380|gb|ESR66394.1| hypothetical protein
           CICLE_v10007840mg [Citrus clementina]
          Length = 580

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/102 (63%), Positives = 83/102 (81%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           ++EHYACY+DLLGK+GK+EDAC VVS M  +PST+I S LVSAC+ HGRLEVA++LA +L
Sbjct: 469 AIEHYACYVDLLGKSGKIEDACKVVSTMPMKPSTRILSSLVSACRIHGRLEVAEMLAHQL 528

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLKN 308
           I+ EPENAA YTLLSM+ +ES NWL  E+V R M+ + L K+
Sbjct: 529 IEAEPENAANYTLLSMVCSESGNWLGAEEVWRVMRAKGLSKS 570


>ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 584

 Score =  132 bits (331), Expect = 6e-29
 Identities = 60/101 (59%), Positives = 79/101 (78%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           S+EHYACYI+LLGK G+LEDAC++V  M  +PS++IWS LV+ACK HG L +A+ LA  L
Sbjct: 476 SLEHYACYINLLGKFGELEDACEIVRSMPMKPSSRIWSSLVTACKVHGSLGIAESLAHHL 535

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           ++ EP+NAA YTLLSM+YAE+ NW  VE+ RR M+  +L K
Sbjct: 536 VRKEPQNAANYTLLSMVYAEAGNWSGVEEARRLMRVHRLRK 576


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score =  131 bits (330), Expect = 8e-29
 Identities = 59/101 (58%), Positives = 81/101 (80%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           ++EHYAC IDLLG++GKLEDA +++  M  +PS +IWS LVSACK HGRL++A++L+  L
Sbjct: 509 TIEHYACLIDLLGRSGKLEDALEILRTMPMKPSARIWSSLVSACKLHGRLDIAEILSPEL 568

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           I+ EP NAA YTLL+MIYAE  +WL +E+VR +MK ++L K
Sbjct: 569 IRSEPNNAANYTLLNMIYAERGHWLDIEQVRETMKLQRLKK 609


>gb|ESW20346.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
          Length = 607

 Score =  129 bits (324), Expect = 4e-28
 Identities = 56/101 (55%), Positives = 80/101 (79%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           ++EHYAC +DLLG++GKLEDA +++  M  +PS ++WS LVSACK HGRL++A++LA  L
Sbjct: 493 TIEHYACLVDLLGRSGKLEDALEILRTMPMKPSARVWSSLVSACKLHGRLDIAEMLAPHL 552

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           I+ EP N   YTLL+MIYAE  +WL  E+VR++MK ++L+K
Sbjct: 553 IRSEPNNTGNYTLLNMIYAEHGHWLDTEQVRKAMKLQRLMK 593


>gb|EMJ23067.1| hypothetical protein PRUPE_ppa018370mg, partial [Prunus persica]
          Length = 412

 Score =  125 bits (315), Expect = 4e-27
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           SVEHYACYI+LLG+ GKLEDA ++V  M  +PSTKIWS LV+ACK HGRLE A+  A +L
Sbjct: 324 SVEHYACYINLLGRLGKLEDAYELVRSMPMKPSTKIWSSLVTACKVHGRLEKAESFAHQL 383

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEK 269
           +  EPENAA YTLLSM++AE+ NWL VE+
Sbjct: 384 VTTEPENAANYTLLSMVHAETGNWLGVEE 412


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  125 bits (315), Expect = 4e-27
 Identities = 57/101 (56%), Positives = 79/101 (78%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           ++EHYAC IDL G++GKLEDA +++  M  +PS +IWS LVS+CK HGRL++A+ L+ +L
Sbjct: 511 TIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQL 570

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           I+ EP NAA YTLLSMI+AE   WL +E+VR +MK ++L K
Sbjct: 571 IRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRK 611


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/101 (56%), Positives = 77/101 (76%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           ++EHYAC +DLLG++GKLE A ++   M  +PS +IWS LVSACK HGRL++A++LA +L
Sbjct: 492 TIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQL 551

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           I+ EP NA  YTLL+ IYAE  +WL  E+VR +MK +KL K
Sbjct: 552 IRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKK 592


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVA-QVLAQR 179
           ++EHYACYI+LLG+ GK++DA +V   M  +PS +IWS L+SAC+ HGRL+VA +++A  
Sbjct: 499 TLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANE 558

Query: 180 LIKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           L+K EP+N A Y LLS I+ ES N+ A E+VRR M++RKL K
Sbjct: 559 LMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNK 600


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVA-QVLAQR 179
           ++EHYACYI+LLG+ GK++DA +V   M  +PS +IWS L+SAC+ HGRL+VA +++A  
Sbjct: 488 TLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANE 547

Query: 180 LIKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           L+K EP+N A Y LLS I+ ES N+ A E+VRR M++RKL K
Sbjct: 548 LMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNK 589


>gb|EPS63937.1| hypothetical protein M569_10844, partial [Genlisea aurea]
          Length = 512

 Score =  114 bits (284), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 67/92 (72%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           S EHYACY+DLLG+AGKLEDA  VV  M   PS +I + L SACK HGRL +A+ LA  L
Sbjct: 421 SSEHYACYVDLLGRAGKLEDAYSVVCSMPMRPSPRILTSLASACKLHGRLNLAEALAGIL 480

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRR 278
           I  EPE AA + L+SMIYAES NW  VE++RR
Sbjct: 481 INDEPEKAATHKLVSMIYAESGNWPKVEEIRR 512


>ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Capsella rubella]
           gi|482552081|gb|EOA16274.1| hypothetical protein
           CARUB_v10004419mg [Capsella rubella]
          Length = 598

 Score =  113 bits (282), Expect = 3e-23
 Identities = 56/102 (54%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVA-QVLAQR 179
           S+EHYACYI+LLG+ GK++DA  V   M  +PS KIWS L+SAC+ HGRL+VA +++A  
Sbjct: 488 SLEHYACYINLLGRFGKIDDAFKVTINMPMKPSAKIWSSLLSACETHGRLDVAGKIIADE 547

Query: 180 LIKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           L+K EP+N A Y LLS ++ ES N+ A E+VRR M+ R L K
Sbjct: 548 LVKSEPDNPANYILLSKVHTESGNFHAAEEVRRIMQSRLLKK 589


>ref|XP_004240612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Solanum lycopersicum]
          Length = 527

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/100 (49%), Positives = 74/100 (74%)
 Frame = +3

Query: 6   VEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRLI 185
           +EH+AC +DLLG+AGKL++A D++ +M+ EP   +W  L+ ACK HG +++A V A++L 
Sbjct: 418 LEHFACMVDLLGRAGKLDEAYDLIQRMSIEPDLFVWGALLGACKQHGNMDLAAVAAEKLA 477

Query: 186 KLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           KLEPE+A    LLS +YA+S  W+ V KV+R +K++KL K
Sbjct: 478 KLEPESAGSSVLLSSLYADSSKWINVAKVKRVIKKKKLKK 517


>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  110 bits (276), Expect = 1e-22
 Identities = 51/101 (50%), Positives = 73/101 (72%)
 Frame = +3

Query: 6   VEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRLI 185
           V+HYAC IDLL +AG L++A +V+++M FEP+  +W   ++ C+ HG LE+++  A++L+
Sbjct: 348 VKHYACVIDLLARAGILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLV 407

Query: 186 KLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLKN 308
           +LEP N AYY LLS IYAE   W  VEKVRR MK+  L K+
Sbjct: 408 ELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGGLTKD 448


>ref|XP_004507163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cicer arietinum]
          Length = 550

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/100 (49%), Positives = 73/100 (73%)
 Frame = +3

Query: 6   VEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRLI 185
           +EHYAC +DLLG+AGKLE+A  ++  M  EP   +W  L++AC+ HG LE+A+V AQ L+
Sbjct: 441 LEHYACMVDLLGRAGKLEEAYGIIKTMPMEPDLFVWGALLAACRNHGHLELAEVAAQHLL 500

Query: 186 KLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           +LEPE+AA   LLS +YA++  W  VE++++ +K+ KL K
Sbjct: 501 ELEPESAANRLLLSSLYADAGKWGKVERIKKRIKKGKLRK 540


>ref|XP_004955129.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Setaria italica]
          Length = 661

 Score =  109 bits (273), Expect = 3e-22
 Identities = 46/102 (45%), Positives = 70/102 (68%)
 Frame = +3

Query: 3   SVEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRL 182
           SVEHY+C +D+LG+AG++E+A  ++  M+FEP+T +W  L+ AC  H  +E  +V A+ L
Sbjct: 547 SVEHYSCLVDMLGRAGRIEEAYRLIEDMSFEPATSVWGALLGACVLHENVEFGEVAAKHL 606

Query: 183 IKLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLKN 308
            +LEPEN   Y LL  +YA +D W  V+ +RR M+++ L KN
Sbjct: 607 FELEPENTENYVLLGKVYAAADRWADVQDLRRMMEEKGLRKN 648


>ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 659

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/100 (49%), Positives = 70/100 (70%)
 Frame = +3

Query: 6   VEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRLI 185
           +EHY C +DLLG+AG L+ A D++ +M  EP + IWS L++AC+ H  +E+A++   RL 
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLF 483

Query: 186 KLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           +L+P N  YY LLS IYA+S  W  VE+VR +MK R L+K
Sbjct: 484 ELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVK 523


>ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Solanum tuberosum]
          Length = 527

 Score =  109 bits (272), Expect = 4e-22
 Identities = 47/100 (47%), Positives = 74/100 (74%)
 Frame = +3

Query: 6   VEHYACYIDLLGKAGKLEDACDVVSQMAFEPSTKIWSCLVSACKFHGRLEVAQVLAQRLI 185
           +EH+AC +DLLG+AGKL++A D++  M+ EP   +W  L+ AC+ HG +++A V A++L 
Sbjct: 418 LEHFACMVDLLGRAGKLDEAYDLIQTMSIEPDLFVWGALLGACRQHGNMDLAAVAAEKLA 477

Query: 186 KLEPENAAYYTLLSMIYAESDNWLAVEKVRRSMKQRKLLK 305
           KLEPE+A    LLS +YA+++ W+ V KV+R +K++KL K
Sbjct: 478 KLEPESAGSSVLLSSLYADANKWVNVAKVKRVIKKKKLKK 517