BLASTX nr result
ID: Catharanthus23_contig00040308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00040308
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY30732.1| Transducin/WD40 repeat-like superfamily protein [... 109 4e-22
emb|CBI28040.3| unnamed protein product [Vitis vinifera] 107 1e-21
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera] 107 2e-21
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig... 103 2e-20
gb|EMJ05876.1| hypothetical protein PRUPE_ppa000309mg [Prunus pe... 103 3e-20
ref|XP_006833370.1| hypothetical protein AMTR_s00109p00103350 [A... 102 7e-20
ref|XP_003630767.1| U-box domain-containing protein [Medicago tr... 101 1e-19
gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus... 99 6e-19
ref|XP_002325006.2| hypothetical protein POPTR_0018s09040g [Popu... 99 6e-19
ref|XP_006580471.1| PREDICTED: putative E3 ubiquitin-protein lig... 99 8e-19
ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein lig... 99 8e-19
ref|XP_006584821.1| PREDICTED: putative E3 ubiquitin-protein lig... 97 2e-18
gb|ESW32315.1| hypothetical protein PHAVU_002G311800g [Phaseolus... 94 2e-17
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr... 92 9e-17
ref|XP_006645675.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 89 6e-16
ref|XP_004971473.1| PREDICTED: putative E3 ubiquitin-protein lig... 89 8e-16
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig... 89 8e-16
tpg|DAA52770.1| TPA: hypothetical protein ZEAMMB73_576745 [Zea m... 87 2e-15
tpg|DAA52769.1| TPA: hypothetical protein ZEAMMB73_576745 [Zea m... 87 2e-15
ref|XP_002454892.1| hypothetical protein SORBIDRAFT_03g000870 [S... 86 7e-15
>gb|EOY30732.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1332
Score = 109 bits (272), Expect = 4e-22
Identities = 50/64 (78%), Positives = 60/64 (93%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
FVLVSHEFGL+FEALAEGL+S EL SACF+AATWLVHML+++PDTG++GAARVCLLK+
Sbjct: 906 FVLVSHEFGLLFEALAEGLKSRSAELCSACFVAATWLVHMLSVIPDTGIRGAARVCLLKR 965
Query: 243 FVSI 254
F+SI
Sbjct: 966 FISI 969
>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
Length = 1154
Score = 107 bits (268), Expect = 1e-21
Identities = 49/64 (76%), Positives = 59/64 (92%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
FVLVSHEFGL+FEALAEGLRS EL S+CF++ATWL+HMLT+LPDTG++GAARVCLLK
Sbjct: 728 FVLVSHEFGLLFEALAEGLRSRNQELFSSCFLSATWLIHMLTVLPDTGIRGAARVCLLKH 787
Query: 243 FVSI 254
F+S+
Sbjct: 788 FISM 791
>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
Length = 1618
Score = 107 bits (267), Expect = 2e-21
Identities = 49/64 (76%), Positives = 59/64 (92%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
FVLVSHEFGL+FEALAEGLRS EL S+CF++ATWL+HMLT+LPDTG++GAARVCLLK
Sbjct: 1192 FVLVSHEFGLLFEALAEGLRSRNQELFSSCFMSATWLIHMLTVLPDTGIRGAARVCLLKH 1251
Query: 243 FVSI 254
F+S+
Sbjct: 1252 FISM 1255
>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1284
Score = 103 bits (257), Expect = 2e-20
Identities = 49/64 (76%), Positives = 59/64 (92%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
F LVS+EFGL+FEALA+GL+S +L SACF++ATWLV+MLTILPDTG++GAARVCLLKQ
Sbjct: 858 FSLVSYEFGLLFEALADGLKSKSADLFSACFLSATWLVYMLTILPDTGIRGAARVCLLKQ 917
Query: 243 FVSI 254
FVSI
Sbjct: 918 FVSI 921
>gb|EMJ05876.1| hypothetical protein PRUPE_ppa000309mg [Prunus persica]
Length = 1300
Score = 103 bits (256), Expect = 3e-20
Identities = 47/63 (74%), Positives = 56/63 (88%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VL SHEFGL+FEALAEGL+S Y EL SACF++ATWL HML +LPDTG++ AARVCLLK+F
Sbjct: 915 VLASHEFGLLFEALAEGLKSRYAELCSACFVSATWLAHMLDVLPDTGIREAARVCLLKRF 974
Query: 246 VSI 254
+SI
Sbjct: 975 ISI 977
>ref|XP_006833370.1| hypothetical protein AMTR_s00109p00103350 [Amborella trichopoda]
gi|548838046|gb|ERM98648.1| hypothetical protein
AMTR_s00109p00103350 [Amborella trichopoda]
Length = 1452
Score = 102 bits (253), Expect = 7e-20
Identities = 46/63 (73%), Positives = 57/63 (90%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VL SHEFGLVFEALAEGL+S Y +L +ACF++ATWLVHMLT+LPDTG+ GAAR CLL++F
Sbjct: 1030 VLASHEFGLVFEALAEGLKSRYAQLSAACFVSATWLVHMLTMLPDTGILGAARHCLLERF 1089
Query: 246 VSI 254
++I
Sbjct: 1090 IAI 1092
>ref|XP_003630767.1| U-box domain-containing protein [Medicago truncatula]
gi|355524789|gb|AET05243.1| U-box domain-containing
protein [Medicago truncatula]
Length = 1068
Score = 101 bits (251), Expect = 1e-19
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VLVSHEFG++FEALA+G++S ELRSACFI+ATWL++MLT LPDTG++GAARVCLLK F
Sbjct: 672 VLVSHEFGILFEALADGMKSRIPELRSACFISATWLIYMLTTLPDTGIQGAARVCLLKPF 731
Query: 246 VS 251
V+
Sbjct: 732 VN 733
>gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
Length = 1365
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VLVSHEFGL+FEA +EGL+S+ EL S CFI+ATWLV ML +LPDTGV+GAARVCLLK F
Sbjct: 940 VLVSHEFGLLFEAFSEGLKSTNAELCSKCFISATWLVDMLKVLPDTGVRGAARVCLLKHF 999
Query: 246 VSI 254
+SI
Sbjct: 1000 ISI 1002
>ref|XP_002325006.2| hypothetical protein POPTR_0018s09040g [Populus trichocarpa]
gi|550318362|gb|EEF03571.2| hypothetical protein
POPTR_0018s09040g [Populus trichocarpa]
Length = 991
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
F LVS+EFGL+FEALAEG+RS ELRSACF++ATWLVHML ILPDTG++ AARVC LK
Sbjct: 649 FALVSYEFGLLFEALAEGMRSRCAELRSACFVSATWLVHMLGILPDTGIRAAARVCFLKL 708
Query: 243 FVSI 254
+ I
Sbjct: 709 LIEI 712
>ref|XP_006580471.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Glycine
max]
Length = 1384
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/62 (72%), Positives = 56/62 (90%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VLVSHEFG +FEALA+G++S ELRSACFI+ATWL++MLTILPDTG++ AAR CLLKQF
Sbjct: 959 VLVSHEFGTLFEALADGMKSRNPELRSACFISATWLIYMLTILPDTGIQVAARACLLKQF 1018
Query: 246 VS 251
++
Sbjct: 1019 IA 1020
>ref|XP_004243102.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Solanum
lycopersicum]
Length = 1384
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
F LVS+EFGL+FEALA+GL+S L SACF++ATWLV+MLTILPDTG++GAARV LLKQ
Sbjct: 950 FSLVSYEFGLLFEALADGLKSKSEHLFSACFLSATWLVYMLTILPDTGIRGAARVSLLKQ 1009
Query: 243 FVSI 254
FVSI
Sbjct: 1010 FVSI 1013
>ref|XP_006584821.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Glycine
max]
Length = 1333
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VLVSHEFG +FEALA+G++S ELRSACFI ATWL++MLTILPDTG+ AAR CLLKQF
Sbjct: 908 VLVSHEFGTLFEALADGMKSRNPELRSACFILATWLIYMLTILPDTGIHVAARACLLKQF 967
Query: 246 VS 251
++
Sbjct: 968 IA 969
>gb|ESW32315.1| hypothetical protein PHAVU_002G311800g [Phaseolus vulgaris]
Length = 1334
Score = 94.0 bits (232), Expect = 2e-17
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
++LVSHEFG +FEALA+G++S ELRSACF++ATWL +MLTILPDTG++ AR CLLK
Sbjct: 908 YILVSHEFGTIFEALADGMKSRNPELRSACFLSATWLTYMLTILPDTGIQVPARACLLKP 967
Query: 243 FVS 251
F++
Sbjct: 968 FIA 970
>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
gi|557554431|gb|ESR64445.1| hypothetical protein
CICLE_v10007255mg [Citrus clementina]
Length = 1380
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = +3
Query: 66 VLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQF 245
VLVSH+FGL+FEAL EGL S + EL SACF +ATWL++ML LPDTG+ GAARV LLK+F
Sbjct: 955 VLVSHDFGLLFEALEEGLNSRFAELYSACFESATWLIYMLNFLPDTGILGAARVSLLKRF 1014
Query: 246 VS 251
+S
Sbjct: 1015 IS 1016
>ref|XP_006645675.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
LIN-like [Oryza brachyantha]
Length = 1245
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
+ LVSHEFGLVFEAL+E LR+ EL +A +A WLVHML++LPDTGV GAARVCLL+Q
Sbjct: 818 YALVSHEFGLVFEALSECLRAKNAELFTASLASAAWLVHMLSLLPDTGVLGAARVCLLRQ 877
Query: 243 FVSI 254
FV +
Sbjct: 878 FVLV 881
>ref|XP_004971473.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Setaria
italica]
Length = 1374
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
+ LVSHEFGLVFEAL+E LRS EL + + ATWLV+ML++LPDTGV GAARVC+L+Q
Sbjct: 946 YALVSHEFGLVFEALSECLRSKNAELFTTSLVCATWLVYMLSLLPDTGVLGAARVCMLRQ 1005
Query: 243 FVSI 254
FV +
Sbjct: 1006 FVIV 1009
>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
sativus]
Length = 1336
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
FVL+SH+FGL+FE LA+GL S + L SACF++ATWL HML LPDTG+ ARVCLL
Sbjct: 911 FVLISHDFGLLFEPLAKGLNSKFAALFSACFVSATWLSHMLRSLPDTGILETARVCLLDH 970
Query: 243 FVSI 254
F+SI
Sbjct: 971 FLSI 974
>tpg|DAA52770.1| TPA: hypothetical protein ZEAMMB73_576745 [Zea mays]
Length = 899
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
+ +VSHEFGLVFEAL+E LR+ EL + + A WLVHML++LPDTGV GAARVCLL+Q
Sbjct: 462 YAVVSHEFGLVFEALSECLRTKNAELFTTSLVCAAWLVHMLSLLPDTGVLGAARVCLLRQ 521
Query: 243 FVSI 254
FV +
Sbjct: 522 FVVV 525
>tpg|DAA52769.1| TPA: hypothetical protein ZEAMMB73_576745 [Zea mays]
Length = 1398
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
+ +VSHEFGLVFEAL+E LR+ EL + + A WLVHML++LPDTGV GAARVCLL+Q
Sbjct: 961 YAVVSHEFGLVFEALSECLRTKNAELFTTSLVCAAWLVHMLSLLPDTGVLGAARVCLLRQ 1020
Query: 243 FVSI 254
FV +
Sbjct: 1021 FVVV 1024
>ref|XP_002454892.1| hypothetical protein SORBIDRAFT_03g000870 [Sorghum bicolor]
gi|241926867|gb|EES00012.1| hypothetical protein
SORBIDRAFT_03g000870 [Sorghum bicolor]
Length = 1404
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +3
Query: 63 FVLVSHEFGLVFEALAEGLRSSYTELRSACFIAATWLVHMLTILPDTGVKGAARVCLLKQ 242
+ +VSHEFGLVFEAL+E LR+ EL + + ATWLV+ML++LP+TGV GAARVCLL+Q
Sbjct: 972 YAVVSHEFGLVFEALSECLRTKNVELFTTSLVCATWLVYMLSLLPETGVLGAARVCLLRQ 1031
Query: 243 FVSI 254
FV +
Sbjct: 1032 FVVV 1035