BLASTX nr result
ID: Catharanthus23_contig00040077
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00040077
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao] 72 1e-10
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 71 1e-10
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 70 4e-10
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 70 4e-10
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 68 1e-09
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 65 7e-09
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 64 2e-08
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 64 2e-08
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 63 5e-08
gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [... 62 1e-07
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 61 2e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 61 2e-07
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 61 2e-07
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 61 2e-07
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 58 1e-06
gb|EOY18655.1| Uncharacterized protein TCM_043150 [Theobroma cacao] 57 2e-06
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 57 3e-06
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 55 7e-06
>gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao]
Length = 178
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = -1
Query: 267 ISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSLDLATDL 100
++HV DDL+LFGEAS+K V I ++ +FC K++ KS++ N L A L
Sbjct: 76 LTHVCFADDLMLFGEASVKQVQTIMRVLDKFCLASGQKVSLEKSRMLVSSNVPLSKARVL 135
Query: 99 SQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
S +IP+ D G YLG PVIHGR ++ Y
Sbjct: 136 SSDAKIPLTKDFGKYLGSPVIHGRVLKTTY 165
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = -1
Query: 288 ASQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTS 121
AS++G IS++ DDLILF EAS++ ++ + RFC K+N KSK+Y NT
Sbjct: 675 ASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSANTH 734
Query: 120 LDLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLYEF 4
LD+ + + D G YLG+P I+GRSS+ Y++
Sbjct: 735 LDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQY 773
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC----*KLNTHKSKLYTRKNTSL 118
SQ G +SH+ DDLILF EAS+ + +I ++ RFC K++ KSK++ +N S
Sbjct: 195 SQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSR 254
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
DL +S + I +LG YLGMPV+ R ++ +
Sbjct: 255 DLGKLISDESGISSTRELGKYLGMPVLQRRINKDTF 290
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC----*KLNTHKSKLYTRKNTSL 118
SQ G ISH+ DDLILF EAS+ + +I I+ FC K++ KSK++ KN S
Sbjct: 347 SQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSR 406
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
DL +S++ I +LG YLGMP++ R ++ +
Sbjct: 407 DLEKLISKESGIKSTRELGKYLGMPILQRRINKDTF 442
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -1
Query: 288 ASQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTS 121
+S SG +SH+ DDL+LF EAS K I+ + + +FC +N KS ++ NT
Sbjct: 44 SSHSGPCVSHLFFADDLVLFAEASTKQAQIMRDCLEKFCSVSGQAVNFDKSAIFCSPNTG 103
Query: 120 LDLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
LA DLS+ P+ +LG YLGMP++H + + Y
Sbjct: 104 NVLAQDLSRICGSPLTANLGNYLGMPILHNKVCKDTY 140
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC----*KLNTHKSKLYTRKNTSL 118
S G +SHV DDLILF EAS+ + II ++ RFC K++ KSK++ N S
Sbjct: 533 SCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSR 592
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
++ +S++ I +LG YLGMP++ R ++ +
Sbjct: 593 EMEQLISEESGIGCTKELGKYLGMPILQKRMNKETF 628
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSL 118
S+ G +SH+ TDDL+LF EA+ I +++ FC K+N K+ +Y KN
Sbjct: 100 SRLGTPLSHLFFTDDLLLFAEATSGQAQCINSVLGDFCLSSGTKVNQSKTHVYFSKNVPD 159
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLYE 7
+AT + + V DLG YLGMP++H R S+ Y+
Sbjct: 160 AVATRIWRDLGYTVTKDLGKYLGMPLLHSRVSQQTYQ 196
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC----*KLNTHKSKLYTRKNTSL 118
S+ G +SH+ DDLILF EAS+ + ++ ++ +FC K++ KSK++ +N
Sbjct: 125 SRGGPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHR 184
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
DL +S + I +LG YLGMPV+ R ++ +
Sbjct: 185 DLEKFISDESGIKSTKELGKYLGMPVLQKRINKDTF 220
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = -1
Query: 288 ASQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*K----LNTHKSKLYTRKNTS 121
ASQSG ISH+ DDL+LF EA+ + + FC ++ KS ++ NT+
Sbjct: 244 ASQSGPRISHLFFVDDLMLFAEATEHQAYGLKTCLDNFCAISGQIISYEKSLIFCSPNTT 303
Query: 120 LDLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLYE 7
+A+ +S P+ DLG YLGMP+IH R ++ Y+
Sbjct: 304 KTMASSISATCGSPLTSDLGKYLGMPLIHSRVNKHTYD 341
>gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [Prunus persica]
Length = 212
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = -1
Query: 282 QSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*K----LNTHKSKLYTRKNTSLD 115
Q+G +SH+ + DDLILF EAS + ++ + FC ++ KS ++ NT
Sbjct: 10 QTGPIVSHLFLVDDLILFTEASTQRARMMKGCLDLFCQASGQTVSFDKSTVFCSPNTIRA 69
Query: 114 LATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
LA ++S + P+ D+LG YLGM ++H R +RS Y
Sbjct: 70 LAQEISFIYGSPLTDNLGKYLGMHILHSRVTRSTY 104
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = -1
Query: 288 ASQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTS 121
ASQSG I H+ DDLILF EAS + ++ + FC ++ KS ++ NTS
Sbjct: 238 ASQSGPKILHLFFADDLILFVEASSQQTSLLKTCLDNFCALSRQTVSFEKSLVFCSPNTS 297
Query: 120 LDLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
A+ +S P+ DLG YLGMP+I+ R ++ Y
Sbjct: 298 KSTASLISNVCGSPLTCDLGKYLGMPLIYDRVNKCTY 334
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSL 118
++ G ISH+ DDL+LFGEAS I+ + + F K+N KS L+ N +
Sbjct: 1206 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNA 1265
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
L + ++PVA+ LGTYLG+P++ R SR+ +
Sbjct: 1266 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTF 1301
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSL 118
++ G ISH+ DDL+LFGEAS I+ + + F K+N KS L+ N +
Sbjct: 674 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNA 733
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
L + ++PVA+ LGTYLG+P++ R SR+ +
Sbjct: 734 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTF 769
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSL 118
++ G ISH+ DDL+LFGEAS I+ + + F K+N KS L+ N +
Sbjct: 674 TRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNA 733
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
L + ++PVA+ LGTYLG+P++ R SR+ +
Sbjct: 734 GLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTF 769
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = -1
Query: 288 ASQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTS 121
A + G ISH+L DDL+LF EASI+ + + + FC K+N K+++Y KN
Sbjct: 99 AGRYGPPISHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKNVD 158
Query: 120 LDLATDLSQKFEIPVADDLGTYLGMPVIHGRSSR 19
L D+ Q + LG YLG + GR+SR
Sbjct: 159 NHLREDIIQHTGFNQVNSLGKYLGANITPGRTSR 192
>gb|EOY18655.1| Uncharacterized protein TCM_043150 [Theobroma cacao]
Length = 522
Score = 57.0 bits (136), Expect = 2e-06
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSL 118
+++G +SHV DD+ LFG A+ + ++ + +FC K+N KSK+ N +
Sbjct: 166 TKNGPTLSHVCFADDIKLFGTATQNQLQVMMRDIHKFCSALDQKVNRQKSKMLVFSNINP 225
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
A +LS + +D G YLG P++HGR R+ Y
Sbjct: 226 TRAKELSCAAYTSLTNDFGKYLGTPMLHGRVQRTTY 261
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = -1
Query: 282 QSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*----KLNTHKSKLYTRKNTSLD 115
+ G + H+ DDLILF EA + + +I + F K+N K+ Y KN +D
Sbjct: 191 RGGPALPHLFFVDDLILFAEALVPRMDVIKGVSNHFRKYSDEKVNVEKTSFYFSKNVGMD 250
Query: 114 LATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLYEF 4
+ +S+ + +LG YLG+P++ GR SL+++
Sbjct: 251 IIHAISECSGFSHSTNLGKYLGVPLLRGRKKYSLFKY 287
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = -1
Query: 285 SQSGLDISHVLVTDDLILFGEASIK*VGIIPNIMRRFC*K----LNTHKSKLYTRKNTSL 118
S++G +SH+ DDL LF EA+ ++ N + FC +N KS ++ NT
Sbjct: 884 SRNGPSVSHLFFADDLALFAEATPCQARVMKNCLDLFCSASGQAVNFAKSVIFCSPNTCK 943
Query: 117 DLATDLSQKFEIPVADDLGTYLGMPVIHGRSSRSLY 10
+A ++ P+ ++LG YLG+P++H R ++ Y
Sbjct: 944 MVAKEIGAICGSPITENLGKYLGLPLLHSRVTKVTY 979