BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039426
         (304 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   127   2e-27
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   126   3e-27
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...    98   1e-18
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]                95   8e-18
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...    91   2e-16
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]        90   3e-16
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...    87   3e-15
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...    84   3e-14
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]        82   6e-14
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li...    79   5e-13
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr...    79   5e-13
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr...    77   3e-12
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   5e-12
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...    75   7e-12
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...    73   3e-11
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...    72   6e-11
gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit ...    72   6e-11
gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]             72   6e-11
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...    72   6e-11
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part...    72   1e-10

>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  127 bits (319), Expect = 2e-27
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSNDVAMLLDDENE 180
           VSSWDV+SLNRGL+LTVQ   MGAFLQQLQNE+ E I+K+EPGLHFYS+D++M+L+DE E
Sbjct: 41  VSSWDVYSLNRGLQLTVQSSHMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYE 100

Query: 181 DTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLE 300
           +TKE IL TP ++  T   ++  SA+KT+GSI  SRK LE
Sbjct: 101 NTKEIILGTPTDKRKTSQSETIVSARKTNGSISTSRKHLE 140


>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
           lycopersicum]
          Length = 617

 Score =  126 bits (317), Expect = 3e-27
 Identities = 63/100 (63%), Positives = 81/100 (81%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSNDVAMLLDDENE 180
           VSSWDV+SLNRGL+LTVQ   MGAFLQQLQNE+ E I+K+EPGLHFYS+D++M+L+DE E
Sbjct: 41  VSSWDVYSLNRGLQLTVQSSHMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYE 100

Query: 181 DTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLE 300
           +TK+ IL TP ++  T   ++  SA+KT+GSI  SRK LE
Sbjct: 101 NTKDIILGTPTDKRKTSQTETIVSARKTNGSISTSRKHLE 140


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLELTVQGE-LMGAFLQQLQNEQTEAIIKQEPGLHFYS-NDVAMLLDDE 174
           VSSW+V+ LNR L+ +V G  LM  FL  LQNEQ EA+IK+EP LH YS NDV M+L DE
Sbjct: 43  VSSWEVYYLNRQLDESVVGNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDE 102

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGS 273
           +E+ KE IL TP ++S   H D  DSAQ+T+G+
Sbjct: 103 HEEIKEDILGTPSDRSGRHHADPFDSAQRTNGN 135


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 53/99 (53%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYS-NDVAMLLDDE 174
           VSSW+V+ LNR L E  V+   M  F   LQNEQ EA++K+EP L+ YS  DV M+LD E
Sbjct: 41  VSSWEVYYLNRQLDESVVKDAEMDGFSGHLQNEQVEAVVKKEPDLYMYSFKDVDMILDAE 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRK 291
           +EDTKE IL TP ++S   H D  DSAQKT+ +I+ SR+
Sbjct: 101 DEDTKEVILRTPTDKSEKLHSDLYDSAQKTNSNIYSSRR 139


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
           subsp. vesca]
          Length = 620

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAI-IKQEPGLHFYS-NDVAMLLDD 171
           VSSW+++ LNR L E  V+   M  FLQ LQNEQ EAI  K+EPGLH YS NDV M+L+ 
Sbjct: 41  VSSWEIYYLNRQLNEPVVRDVEMEGFLQHLQNEQKEAINSKEEPGLHIYSSNDVDMILNG 100

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLEL 303
           E+ D +E +LHTPI++S   + DS DS  +T+G++  S K  +L
Sbjct: 101 EDVDIEETVLHTPISKSQNRYSDSFDSTPQTNGNVPSSGKPTKL 144


>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
          Length = 670

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLE-LTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L   TVQ   M  FL  LQ+EQ EAIIK+EPGLH YS+ DV M+L+DE
Sbjct: 41  VSSWEVYYLNRQLNGSTVQNAEMDGFLLHLQDEQKEAIIKEEPGLHIYSSKDVDMILNDE 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLEL 303
           + D KE +  TP   S   + +  DS  +T+G IF S K  +L
Sbjct: 101 DGDEKEEVPGTPTRNSQDSYSEQFDSTPQTNGKIFSSGKPSKL 143


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L E TVQ   M  FL  LQNEQ EAIIK+EP LH YS+ DV M+L+DE
Sbjct: 42  VSSWEVYYLNRQLDESTVQNGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDE 101

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQ 294
            ED KE +  TP ++S   + +  DS  K+ G+ + S K+
Sbjct: 102 GEDLKEEVPGTPTDESQKLNSEPFDSIIKSTGNGYSSGKR 141


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
           gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
           polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLE-LTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L+   V+ E +  FLQ LQNEQ E +IK EP LH YS+ DV ++L+DE
Sbjct: 41  VSSWEVYYLNRLLDGSVVELEQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDE 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRK 291
           NED  E IL TP  +S + H +  D    T+  +F S K
Sbjct: 101 NEDLNEDILKTPNGKSQSLHKERLDLTPYTNEGLFSSGK 139


>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
          Length = 595

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSNDVAMLLDDENE 180
           VSSWDV+S+NRGL+ TV+   M  FL++L NEQ + + +++ GLH YSNDVAMLL+ +NE
Sbjct: 41  VSSWDVYSINRGLDFTVRSSHMAPFLEELLNEQKDKLKEKQSGLHLYSNDVAMLLNVKNE 100

Query: 181 DTKEGILHTPINQSATPHLDSSDSAQKT 264
           D  E  L +P+++  +P     DS   +
Sbjct: 101 DA-EVTLGSPVDEITSPFDKPPDSVSSS 127


>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
          Length = 620

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L E TV+ + M  F+  LQNEQ EAIIK+EP LH YS+ DV M+L++E
Sbjct: 41  VSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNE 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLEL 303
           +E+  E IL TP   +   + D+ DS  K + + + S K  +L
Sbjct: 101 DENIAEDILGTP-TDNLKLYSDALDSTYKANANGYSSDKPSKL 142


>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
           gi|557540306|gb|ESR51350.1| hypothetical protein
           CICLE_v10030973mg [Citrus clementina]
          Length = 620

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L E TV+ + M  F+  LQNEQ EAIIK+EP LH YS+ DV M+L++E
Sbjct: 41  VSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNE 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLEL 303
           +E+  E IL TP   +   + D+ DS  K + + + S K  +L
Sbjct: 101 DENIAEDILGTP-TDNLKLYSDALDSTYKANANGYSSDKPSKL 142


>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
           gi|557087677|gb|ESQ28529.1| hypothetical protein
           EUTSA_v10018287mg [Eutrema salsugineum]
          Length = 622

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+++ LNR + + TV+ + M  FL  LQN+Q E+I+K+E GLH YSN DV M+LD  
Sbjct: 43  VSSWELYHLNRQIIDQTVKKDEMDGFLLHLQNQQRESIMKEEAGLHIYSNRDVDMILDGI 102

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKT 264
            EDT E  + TP N S   H D  DS  ++
Sbjct: 103 PEDTTEETVTTPTNNSQRLHPDPFDSINRS 132


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   VSSWDVFSLNRGLE-LTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFY-SNDVAMLLDDE 174
           VS+W+V+ LNR L+ L V+   +  FL  LQNE  E +IK+E  LH Y SNDV MLL + 
Sbjct: 46  VSNWEVYYLNRQLDGLKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDMLLSNT 105

Query: 175 NEDTKEGILHTPINQSATPHLDSSDS 252
           + D +EGIL TP  +   PH+DSS+S
Sbjct: 106 HTD-EEGILDTPSTKQEKPHVDSSNS 130


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
           gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
           B family protein [Populus trichocarpa]
          Length = 618

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEPGLHFYSN-DVAMLLDDE 174
           VSSW+V+ LNR L E TV+   M  FL  LQNEQ EA++K+EP L+ YS+ DV M+L+ +
Sbjct: 41  VSSWEVYYLNRLLDESTVRNAEMDGFLLHLQNEQKEAVVKEEPNLYIYSSKDVDMILNYD 100

Query: 175 NEDTKEGILHTPINQSATPHLDSSDSAQKTDGSIFGSRKQLEL 303
            ED KE +  TP ++S   + +  +S  K+ G+ + S K  +L
Sbjct: 101 EEDLKEEVPGTPTDKSLKLNSEPFNSPPKSYGNGYSSGKPSKL 143


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIK-QEPGLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I++ +E GLH YSN DV MLLD 
Sbjct: 43  VSSWELYHLNRQLLDQTVKKDEMDGFVLHLQNEQKESIMRAEEAGLHLYSNRDVDMLLDG 102

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
             EDT+E I+ TP N+S   H D  DS  ++
Sbjct: 103 VQEDTEE-IVTTPTNESQRLHPDPFDSISRS 132


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
           gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
           thaliana]
          Length = 620

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIK-QEPGLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I++ +E GLH YSN DV MLLD 
Sbjct: 43  VSSWELYHLNRQLLDQTVKKDDMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDG 102

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
             EDT+E I+ TP N+S   H D  DS  ++
Sbjct: 103 VQEDTEE-IVTTPTNKSQRLHPDPFDSISRS 132


>gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
          Length = 620

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIK-QEPGLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I++ +E GLH YSN DV MLLD 
Sbjct: 43  VSSWELYHLNRQLLDQTVKKDDMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDG 102

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
             EDT+E I+ TP N+S   H D  DS  ++
Sbjct: 103 VQEDTEE-IVTTPTNKSQRLHPDPFDSISRS 132


>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIK-QEPGLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I++ +E GLH YSN DV MLLD 
Sbjct: 43  VSSWELYHLNRQLLDQTVKKDDMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDG 102

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
             EDT+E I+ TP N+S   H D  DS  ++
Sbjct: 103 VQEDTEE-IVTTPTNKSQRLHPDPFDSISRS 132


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
           gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
           [Arabidopsis thaliana]
          Length = 620

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIK-QEPGLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I++ +E GLH YSN DV MLLD 
Sbjct: 43  VSSWELYHLNRQLLDQTVKKDDMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDG 102

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
             EDT+E I+ TP N+S   H D  DS  ++
Sbjct: 103 VQEDTEE-IVTTPTNKSQRLHPDPFDSISRS 132


>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
           gi|482569343|gb|EOA33531.1| hypothetical protein
           CARUB_v10019947mg, partial [Capsella rubella]
          Length = 639

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VSSWDVFSLNRGL-ELTVQGELMGAFLQQLQNEQTEAIIKQEP-GLHFYSN-DVAMLLDD 171
           VSSW+++ LNR L + TV+ + M  F+  LQNEQ E+I+++E  GLH YSN D+ MLLD 
Sbjct: 62  VSSWELYHLNRQLLDQTVKKDEMDGFVLHLQNEQKESIMREEASGLHLYSNRDIDMLLDK 121

Query: 172 ENEDTKEGILHTPINQSATPHLDSSDSAQKT 264
            +EDT E I+ TP N+S   H D  DS  ++
Sbjct: 122 VHEDTGE-IVTTPTNKSQRLHPDPFDSISRS 151