BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039388
         (630 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi...   262   7e-68
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi...   259   4e-67
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi...   252   5e-65
ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, par...   248   8e-64
ref|XP_004498496.1| PREDICTED: pentatricopeptide repeat-containi...   244   2e-62
ref|XP_003588474.1| Pentatricopeptide repeat-containing protein ...   237   2e-60
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258...   236   5e-60
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   235   7e-60
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein...   234   2e-59
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]   233   3e-59
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,...   232   6e-59
gb|ESW31567.1| hypothetical protein PHAVU_002G248800g [Phaseolus...   230   3e-58
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]     228   1e-57
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi...   227   2e-57
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   216   3e-54
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   216   4e-54
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi...   215   1e-53
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...   207   2e-51
ref|XP_002308737.1| pentatricopeptide repeat-containing family p...   207   2e-51
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps...   207   2e-51

>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Solanum lycopersicum]
          Length = 653

 Score =  262 bits (669), Expect = 7e-68
 Identities = 132/209 (63%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VL LID GAMD DASLYN+LL++CT+  +LKEGR+VH HFL S + +Y   +N LI M
Sbjct: 65  LLVLYLIDNGAMDADASLYNQLLKKCTEWKRLKEGRVVHEHFLRSRFSHYTVPNNTLINM 124

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKC    +ARKVFDEMP+RDMVSWTA+ITG+SQN+ A+  L LF EMLR GF PNQFT 
Sbjct: 125 YAKCESMGDARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTF 184

Query: 268 GSVLKAAGAV-GEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
           GSV+KAAGA+  +  GRQ+HG C   GY  +VYVGSALVDMYAR G M+E K++FD L  
Sbjct: 185 GSVIKAAGALESDSTGRQLHGACVKCGYEDNVYVGSALVDMYARCGLMDEGKIVFDKLSC 244

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           K+EV WN LI+GHARKG+   A+ LF EM
Sbjct: 245 KNEVSWNGLIAGHARKGEGEIALKLFCEM 273



 Score =  126 bits (316), Expect = 6e-27
 Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P+   +  +++    L     GR +H   +   Y + +   + L+ MYA+CGL DE + V
Sbjct: 179 PNQFTFGSVIKAAGALESDSTGRQLHGACVKCGYEDNVYVGSALVDMYARCGLMDEGKIV 238

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGER 230
           FD++  ++ VSW  +I G ++  + E AL+LF EM R GF P  FT  SV  A   +G  
Sbjct: 239 FDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACANIGAL 298

Query: 229 E-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
           E G+ +H     +G     ++G+ L+DMYA+SG +++A+ +FD L  K  V WN++++ +
Sbjct: 299 EPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARKVFDRLVKKDVVSWNSMLTAY 358

Query: 52  ARKGDAADAVGLFSEM 5
           A+ G   + V  F EM
Sbjct: 359 AQHGLGIETVECFEEM 374



 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 604 KGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPD 425
           +G   P    ++ +   C  +G L+ G+ VH H + S         N L+ MYAK G  D
Sbjct: 275 RGGFQPTHFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSID 334

Query: 424 EARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG 245
           +ARKVFD + ++D+VSW +++T ++Q+      +  F EM R G  PN+ T    L A  
Sbjct: 335 DARKVFDRLVKKDVVSWNSMLTAYAQHGLGIETVECFEEMCRIGPEPNEVTFLCALTACS 394

Query: 244 AVGEREGRQIHGVCFMTGYCGDVYVGS--ALVDMYARSGQMEEA-KMLFDCLESKSEVPW 74
             G  +   +H    M  +  +  +     +VD+  RSGQ++ A K + +     S   W
Sbjct: 395 HAGLLD-NGMHYFELMKKFKIEPNISHYVTIVDLLGRSGQLDRAEKFINEMPIEPSAAIW 453

Query: 73  NALI 62
            AL+
Sbjct: 454 KALL 457


>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Solanum tuberosum]
          Length = 654

 Score =  259 bits (662), Expect = 4e-67
 Identities = 133/209 (63%), Positives = 158/209 (75%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VL LID GAMD DASLYN+LL++CT+  +LKEGR+VH HFL S + +Y   +N LI M
Sbjct: 66  LLVLYLIDNGAMDADASLYNQLLKKCTEWKRLKEGRVVHEHFLRSRFSHYTVPNNTLINM 125

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKC    +ARKVFDEMP+RDMVSWTA+ITG+SQN+ A+  L LF EMLR GF PNQFT 
Sbjct: 126 YAKCESMGDARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTF 185

Query: 268 GSVLKAAGAV-GEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
           GSVLKAAGA+     GRQ+HG C   GY  +VYVGSALVDMYAR G M+E K++FD L  
Sbjct: 186 GSVLKAAGALESGGTGRQLHGGCVKCGYEENVYVGSALVDMYARCGLMDEGKIVFDKLSC 245

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           K+EV WN LI+GHARKG+   A+ LF EM
Sbjct: 246 KNEVSWNGLIAGHARKGEGEIALKLFCEM 274



 Score =  125 bits (314), Expect = 1e-26
 Identities = 67/196 (34%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P+   +  +L+    L     GR +H   +   Y   +   + L+ MYA+CGL DE + V
Sbjct: 180 PNQFTFGSVLKAAGALESGGTGRQLHGGCVKCGYEENVYVGSALVDMYARCGLMDEGKIV 239

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGER 230
           FD++  ++ VSW  +I G ++  + E AL+LF EM R GF P  FT  SV  A   +G  
Sbjct: 240 FDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACANIGAL 299

Query: 229 E-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
           E G+ +H     +G     ++G+ L+DMYA+SG +++A+ +FD L  K  V WN++++ +
Sbjct: 300 EPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSIDDARKVFDRLLKKDVVSWNSMLTAY 359

Query: 52  ARKGDAADAVGLFSEM 5
           A+ G   + V  F EM
Sbjct: 360 AQHGLGKETVECFEEM 375



 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
 Frame = -3

Query: 604 KGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPD 425
           +G   P    ++ +   C  +G L+ G+ VH H + S         N L+ MYAK G  D
Sbjct: 276 RGGFQPTHFTFSSVYAACANIGALEPGKWVHVHMIKSGLELIAFIGNTLLDMYAKSGSID 335

Query: 424 EARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG 245
           +ARKVFD + ++D+VSW +++T ++Q+   +  +  F EM R G  PN+ T    L A  
Sbjct: 336 DARKVFDRLLKKDVVSWNSMLTAYAQHGLGKETVECFEEMCRIGPEPNEVTFLCALTACS 395

Query: 244 AVGEREGRQIHGVCFMTGYCGDVYVGS--ALVDMYARSGQMEEA-KMLFDCLESKSEVPW 74
             G  +   +H    M  +  +  +     +VD+  RSGQ++ A K + +     +   W
Sbjct: 396 HAGLLD-NGMHYFELMKKFKIEPIISHYVTIVDLLGRSGQLDRAEKFINEMPIEPTAAVW 454

Query: 73  NALI 62
            AL+
Sbjct: 455 KALL 458


>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Citrus sinensis]
          Length = 670

 Score =  252 bits (644), Expect = 5e-65
 Identities = 126/211 (59%), Positives = 159/211 (75%), Gaps = 2/211 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLI++G+++PD S+YN LL++CT L KLKE RIVHAH L S ++N I   N ++  
Sbjct: 81  LHVLDLINRGSLEPDRSIYNTLLKKCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNA 140

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  DEARK+FDEMP +DMV+WTA+I+G+SQND+ E A+ LF +MLR G  PNQFTL
Sbjct: 141 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 200

Query: 268 GSVLKA--AGAVGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE 95
            SVLKA  AGA  ++ GRQ+H  C   GY  +VYVGS+L+DMYAR  QM++A  LF  LE
Sbjct: 201 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 260

Query: 94  SKSEVPWNALISGHARKGDAADAVGLFSEML 2
           SK+EV WNALI+GHARK +   A+  FSEML
Sbjct: 261 SKNEVSWNALIAGHARKSEGEKALRTFSEML 291



 Score =  113 bits (282), Expect = 5e-23
 Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 KEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGF 353
           K GR VHA  L   Y   +   + L+ MYA+    D+A  +F  +  ++ VSW A+I G 
Sbjct: 215 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 274

Query: 352 SQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDV 176
           ++  + E+ALR F EMLR GF P  F+  SV  A  + G  E G+ +H     +G     
Sbjct: 275 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 334

Query: 175 YVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           +VG+ LVDMYA+SG +E+A+ +F+ L  +  V WN++++G A+ G     V  F +ML
Sbjct: 335 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 392



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
 Frame = -3

Query: 592 DPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARK 413
           +P    Y+ +       G L++G+ VHAH + S  +      N L+ MYAK G  ++A K
Sbjct: 296 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 355

Query: 412 VFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKA---AGA 242
           VF+ + +RD+VSW +++TG +Q+   +  +R F +MLRNG  PNQ T   VL A   AG 
Sbjct: 356 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 415

Query: 241 VGEREG----RQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEA-KMLFDCLESKSEVP 77
           + E +G     + HGV     +    YV    VD+  R+G ++ A K + +     +   
Sbjct: 416 LDEGQGYFALMKKHGVEPEEAH----YV--TFVDLLGRAGLLDRALKFIREMPIEPTAAV 469

Query: 76  WNALI 62
           W AL+
Sbjct: 470 WGALL 474


>ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, partial [Citrus
           clementina] gi|557552589|gb|ESR63218.1| hypothetical
           protein CICLE_v100176691mg, partial [Citrus clementina]
          Length = 317

 Score =  248 bits (634), Expect = 8e-64
 Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 2/211 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLI+ G+++PD S+YN LL++CT L KLKE RIVHAH L S +++ I   N ++  
Sbjct: 51  LHVLDLINCGSLEPDRSIYNTLLKKCTHLKKLKEARIVHAHILGSAFKHDIAMQNTILNA 110

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  DEARK+FDEMP +DMV+WTA+I+G+SQND+ E A+ LF +MLR G  PNQFTL
Sbjct: 111 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 170

Query: 268 GSVLKA--AGAVGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE 95
            SVLKA  AGA  ++ GRQ+H  C   GY  +VYVGS+L+DMYAR  QM++A  LF  LE
Sbjct: 171 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 230

Query: 94  SKSEVPWNALISGHARKGDAADAVGLFSEML 2
           SK+EV WNALI+GHARK +   A+  FSEML
Sbjct: 231 SKNEVSWNALIAGHARKSEGEKALRTFSEML 261



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
 Frame = -3

Query: 532 KEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGF 353
           K GR VHA  L   Y   +   + L+ MYA+    D+A  +F  +  ++ VSW A+I G 
Sbjct: 185 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 244

Query: 352 SQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDV 176
           ++  + E+ALR F EMLR GF P  F+  SV  A  + G  E G+ +H     +G     
Sbjct: 245 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 304

Query: 175 YVGSALVDMYARS 137
           +VG+ LVDMYA+S
Sbjct: 305 FVGNTLVDMYAKS 317


>ref|XP_004498496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cicer arietinum]
          Length = 660

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/209 (56%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLID G+++PD ++YNKLL+RCTQLGKLKEG++VH H LNS  +N +   N ++ M
Sbjct: 71  LHVLDLIDSGSLEPDRTIYNKLLKRCTQLGKLKEGKLVHTHILNSKLKNDLFIQNSILFM 130

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  + AR+VFDEM  +D+V+WT++ITG+SQN+ A  AL LF EM+R+G  PN+FTL
Sbjct: 131 YAKCGCLELARQVFDEMGLKDVVTWTSMITGYSQNECASSALVLFPEMIRDGSRPNEFTL 190

Query: 268 GSVLKAAGAVGE-REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S++K +G +G   +G+QIHG C+  G+  +VYVGS+LVDMYAR G + EA+++F+ LES
Sbjct: 191 SSLVKCSGFLGSCVDGKQIHGCCWKYGFQTNVYVGSSLVDMYARCGYLREAQLVFNELES 250

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           K+EV WNALISG+ARKG   +A+ LF  M
Sbjct: 251 KNEVSWNALISGYARKGQGEEALALFVTM 279



 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P+    + L++    LG   +G+ +H       ++  +   + L+ MYA+CG   EA+ V
Sbjct: 185 PNEFTLSSLVKCSGFLGSCVDGKQIHGCCWKYGFQTNVYVGSSLVDMYARCGYLREAQLV 244

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGER 230
           F+E+  ++ VSW A+I+G+++  + E AL LF+ M R  +    FT  ++L ++ + G  
Sbjct: 245 FNELESKNEVSWNALISGYARKGQGEEALALFVTMQREDYGATDFTYSALLCSSSSTGSL 304

Query: 229 E-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
           E G+ +H     +G     YVG+ L+ MYA+SG + +AK +FD L     V  N+++ G+
Sbjct: 305 EQGKWLHAHMMKSGRKLVGYVGNTLLHMYAKSGNIWDAKKVFDRLVKVDVVSCNSMLIGY 364

Query: 52  ARKGDAADAVGLFSEML 2
           A+ G   +AV LF EML
Sbjct: 365 AQHGFGKEAVDLFEEML 381


>ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477522|gb|AES58725.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  237 bits (605), Expect = 2e-60
 Identities = 115/212 (54%), Positives = 163/212 (76%), Gaps = 4/212 (1%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLI+ G+++PD ++YNKLL+RCT LGKLK+G++VH H +NS +RN +   N ++ M
Sbjct: 76  LHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFM 135

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQN---DKAERALRLFLEMLRNGFFPNQ 278
           YAKCG  + AR+VFDEM  +D+V+WT++ITG+SQ+     A  AL LFLEM+R+G  PN+
Sbjct: 136 YAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195

Query: 277 FTLGSVLKAAGAVGE-REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDC 101
           F L S++K  G +G   +G+QIHG C+  G+  +V+VGS+LVDMYAR G++ E++++FD 
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255

Query: 100 LESKSEVPWNALISGHARKGDAADAVGLFSEM 5
           LESK+EV WNALISG ARKG+  +A+GLF +M
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKM 287



 Score =  122 bits (305), Expect = 1e-25
 Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
 Frame = -3

Query: 619 LDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAK 440
           L+++  G + P+    + L++ C  LG   +G+ +H       ++  +   + L+ MYA+
Sbjct: 184 LEMVRDG-LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYAR 242

Query: 439 CGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSV 260
           CG   E+R VFDE+  ++ VSW A+I+GF++  + E AL LF++M R GF   +FT  ++
Sbjct: 243 CGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSAL 302

Query: 259 LKAAGAVGERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSE 83
           L ++   G  E G+ +H     +G     YVG+ L+ MYA+SG + +AK +FD L     
Sbjct: 303 LCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDV 362

Query: 82  VPWNALISGHARKGDAADAVGLFSEML 2
           V  N+++ G+A+ G   +AV LF EM+
Sbjct: 363 VSCNSMLIGYAQHGLGKEAVELFEEMM 389



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
 Frame = -3

Query: 574 YNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMP 395
           Y+ LL   +  G L++G+ +HAH + S  +      N L+ MYAK G   +A+KVFD + 
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV 358

Query: 394 QRDMVSWTAVITGFSQNDKAERALRLFLEM-LRNGFFPNQFTLGSVLKAAGAVGER-EGR 221
           + D+VS  +++ G++Q+   + A+ LF EM L     PN  T  SVL A    G   EG 
Sbjct: 359 KVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGL 418

Query: 220 QIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVP-WNALI 62
               +    G    +   + +VD++ R+G +++AK   + +  +     W AL+
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472


>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  236 bits (601), Expect = 5e-60
 Identities = 117/210 (55%), Positives = 157/210 (74%), Gaps = 2/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYR-NYITTHNMLIV 452
           L+ LDLI +G++ PD +LY+KLL+ CT+LGK+++GRIVHAH ++S +  N++   N+++ 
Sbjct: 72  LYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVN 131

Query: 451 MYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFT 272
           MYAKCG  D+AR++FDEMP +DMV+WTA+I GFSQN++   AL LF +MLR GF PN FT
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFT 191

Query: 271 LGSVLKAAGAV-GEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE 95
           L S+LKA+G+  G   G Q+H  C   GY   VYVGSALVDMYAR G M+ A++ FD + 
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251

Query: 94  SKSEVPWNALISGHARKGDAADAVGLFSEM 5
           +KSEV WNALISGHARKG+   A+ L  +M
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKM 281



 Score =  122 bits (306), Expect = 8e-26
 Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P+    + LL+       L  G  +HA  L   Y++ +   + L+ MYA+CG  D A+  
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGER 230
           FD MP +  VSW A+I+G ++  + E AL L  +M R  F P  FT  SVL A  ++G  
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306

Query: 229 E-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
           E G+ +H     +G     ++G+ L+DMYA++G +++AK +FD L     V WN +++G 
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366

Query: 52  ARKGDAADAVGLFSEML 2
           A+ G   + +  F +ML
Sbjct: 367 AQHGLGKETLDRFEQML 383



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 45/131 (34%), Positives = 71/131 (54%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L +L  + +    P    Y+ +L  C  +G L++G+ VHAH + S  +      N L+ M
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAK G  D+A++VFD + + D+VSW  ++TG +Q+   +  L  F +MLR G  PN+ + 
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394

Query: 268 GSVLKAAGAVG 236
             VL A    G
Sbjct: 395 LCVLTACSHSG 405


>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  235 bits (600), Expect = 7e-60
 Identities = 116/209 (55%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLID G+++PD +LYN LL+RCTQLGKLKEG++VH H LNS +++ +   N L+ M
Sbjct: 59  LHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFM 118

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YA+CG  + AR++FDEMP RDMVSWT++ITG++QND+A  AL LF  ML +G  PN+FTL
Sbjct: 119 YARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTL 178

Query: 268 GSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S++K  G +     GRQIH  C+  G   +V+VGS+LVDMYAR G + EA ++FD L  
Sbjct: 179 SSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGC 238

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           K+EV WNALI+G+ARKG+  +A+ LF  M
Sbjct: 239 KNEVSWNALIAGYARKGEGEEALALFVRM 267



 Score =  110 bits (276), Expect = 3e-22
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 1/205 (0%)
 Frame = -3

Query: 613 LIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCG 434
           ++  GA +P+    + L++ C  +     GR +HA        + +   + L+ MYA+CG
Sbjct: 166 MLSDGA-EPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCG 224

Query: 433 LPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLK 254
              EA  VFD++  ++ VSW A+I G+++  + E AL LF+ M R G+ P +FT  ++L 
Sbjct: 225 YLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLS 284

Query: 253 AAGAVG-EREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVP 77
           +  ++G   +G+ +H     +      YVG+ L+ MYA+SG + +A+ +FD L     V 
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVS 344

Query: 76  WNALISGHARKGDAADAVGLFSEML 2
            N+++ G+A+ G   +A   F EM+
Sbjct: 345 CNSMLIGYAQHGLGKEAAQQFDEMI 369



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P    Y+ LL  C+ +G L++G+ +HAH + S  +      N L+ MYAK G   +A KV
Sbjct: 274 PTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKV 333

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG-AVGE 233
           FD++ + D+VS  +++ G++Q+   + A + F EM+R G  PN  T  SVL A   A   
Sbjct: 334 FDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLL 393

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVP-WNALI 62
            EG+   G+         V   + +VD+  R+G +++AK   + +  +  V  W AL+
Sbjct: 394 DEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 PNQFTLGSVLKAAGAVGE-REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKML 110
           P++    ++LK    +G+ +EG+ +H     + +  D+ + ++L+ MYAR G +E A+ L
Sbjct: 72  PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131

Query: 109 FDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           FD +  +  V W ++I+G+A+   A+DA+ LF  ML
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRML 167


>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508781793|gb|EOY29049.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 675

 Score =  234 bits (597), Expect = 2e-59
 Identities = 116/214 (54%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDL+D+G+++P  +LY+ LL++CT+L K K G+IVHAH LNS++R+ +   N L+ M
Sbjct: 83  LHVLDLLDQGSLEPHRALYHLLLKKCTRLRKPKLGKIVHAHILNSLFRHDLVILNSLLNM 142

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  D+AR +FD+MP +DMVSWT +IT +SQ+ +   A+ LF  ML  GFFPNQFTL
Sbjct: 143 YAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHMLSLGFFPNQFTL 202

Query: 268 GSVLKAAGAVGER-----EGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFD 104
            S+LKA+ A+ +       G Q+H  CF  G   +VYVGS+L+DMYAR G M+EA+++FD
Sbjct: 203 SSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDEARLIFD 262

Query: 103 CLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
            L SK+EV WNALI+GHARKG A  A+ LF +ML
Sbjct: 263 ALHSKNEVSWNALIAGHARKGQADHALWLFRKML 296



 Score =  121 bits (304), Expect = 1e-25
 Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           G  +HA        + +   + L+ MYA+CG  DEAR +FD +  ++ VSW A+I G ++
Sbjct: 222 GTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDEARLIFDALHSKNEVSWNALIAGHAR 281

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYV 170
             +A+ AL LF +MLR  F P  FT  S+L A  + G  E G+ +H     +G     ++
Sbjct: 282 KGQADHALWLFRKMLRQDFQPTHFTFCSILGACASTGSLEQGKWVHAHVIKSGGEIVAFM 341

Query: 169 GSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           G+ L+ MYA+SG +++AKM+FD L     V WN++++ +A+ G   +AV  F EML
Sbjct: 342 GNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLTAYAQHGLGKEAVQWFQEML 397



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
 Frame = -3

Query: 604 KGAMDPDASLYNKLLRR---------------CTQLGKLKEGRIVHAHFLNSIYRNYITT 470
           KG  D    L+ K+LR+               C   G L++G+ VHAH + S        
Sbjct: 282 KGQADHALWLFRKMLRQDFQPTHFTFCSILGACASTGSLEQGKWVHAHVIKSGGEIVAFM 341

Query: 469 HNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGF 290
            N L+ MYAK G   +A+ +FD + + D+VSW +++T ++Q+   + A++ F EMLR G 
Sbjct: 342 GNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLTAYAQHGLGKEAVQWFQEMLRIGV 401

Query: 289 FPNQFTLGSVLKAAGAVGEREGRQIHGVCFMTGYCGDVYVGS--ALVDMYARSGQMEEAK 116
            PN  T   +L A    G  +  Q +    M+ Y  +  +     +VD++ R+G +++A+
Sbjct: 402 GPNDITFLCLLTACSRAGLLDQGQYY-FKLMSNYNIEPQISHYVTIVDLFGRAGLLDKAE 460

Query: 115 MLFDCLESK-SEVPWNALI 62
                +  K +   W AL+
Sbjct: 461 RFIREMPIKPTAAVWGALL 479


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  233 bits (595), Expect = 3e-59
 Identities = 116/210 (55%), Positives = 156/210 (74%), Gaps = 2/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYR-NYITTHNMLIV 452
           L+ LDLI +G++ PD +LY+KLL+ CT+LGK+++GRIVHAH ++S +  N++   N+++ 
Sbjct: 72  LYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVN 131

Query: 451 MYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFT 272
           MYAKCG  D+AR++FDEMP +DMV+WTA+I GFSQN++   AL LF +MLR G  PN FT
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFT 191

Query: 271 LGSVLKAAGAV-GEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE 95
           L S+LKA+G+  G   G Q+H  C   GY   VYVGSALVDMYAR G M+ A++ FD + 
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251

Query: 94  SKSEVPWNALISGHARKGDAADAVGLFSEM 5
           +KSEV WNALISGHARKG+   A+ L  +M
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKM 281



 Score =  121 bits (304), Expect = 1e-25
 Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
 Frame = -3

Query: 595 MDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEAR 416
           + P+    + LL+       L  G  +HA  L   Y++ +   + L+ MYA+CG  D A+
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244

Query: 415 KVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG 236
             FD MP +  VSW A+I+G ++  + E AL L  +M R  F P  FT  SV  A  ++G
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG 304

Query: 235 ERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALIS 59
             E G+ +H     +G     ++G+ L+DMYA++G +++AK +FD L     V WN +++
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT 364

Query: 58  GHARKGDAADAVGLFSEML 2
           G A+ G   + +  F +ML
Sbjct: 365 GCAQHGLGKETLDRFEQML 383



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 44/131 (33%), Positives = 70/131 (53%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L +L  + +    P    Y+ +   C  +G L++G+ VHAH + S  +      N L+ M
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAK G  D+A++VFD + + D+VSW  ++TG +Q+   +  L  F +MLR G  PN+ + 
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394

Query: 268 GSVLKAAGAVG 236
             VL A    G
Sbjct: 395 LCVLTACSHSG 405


>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 420

 Score =  232 bits (592), Expect = 6e-59
 Identities = 116/210 (55%), Positives = 155/210 (73%), Gaps = 1/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLID+ +++PD +LY+ L ++CT   KLKEG++VHAH LNS +++ +   N ++ M
Sbjct: 66  LHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNM 125

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG   EARKVFD+MP +D+V+WTA+ITG+SQ+D+ + AL LF +ML  GF PN FTL
Sbjct: 126 YAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTL 185

Query: 268 GSVLKAAG-AVGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S+LKA+G +  +  GR +H  C   GY  +VYVGSAL+DMYARSG +EEA  +FD L S
Sbjct: 186 SSLLKASGVSPSDSNGRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPS 245

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEML 2
           ++EV WNALI+G ARKGD   A   FS+ML
Sbjct: 246 RNEVSWNALIAGCARKGDQELAFSFFSKML 275



 Score =  116 bits (290), Expect = 6e-24
 Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           GR++HA  +   Y   +   + L+ MYA+ G  +EA  +FD +P R+ VSW A+I G ++
Sbjct: 201 GRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCAR 260

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYV 170
               E A   F +MLR    P QFT   VL A  ++G  E G+ +H +   +G     +V
Sbjct: 261 KGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFV 320

Query: 169 GSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           G+ L+ MYA+SG +E+A+ +FD L  +  V WN++++G+A+ G    A+ +F +ML
Sbjct: 321 GNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQML 376



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 44/120 (36%), Positives = 67/120 (55%)
 Frame = -3

Query: 595 MDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEAR 416
           + P    Y+ +L  C  +G L++G+ VHA  + S  +      N L+ MYAK G  ++AR
Sbjct: 279 IQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDAR 338

Query: 415 KVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG 236
           KVFD + +RD+VSW +++ G++Q+     AL +F +ML  G  PN  T   VL A    G
Sbjct: 339 KVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIGVAPNDITFLCVLTACSHAG 398


>gb|ESW31567.1| hypothetical protein PHAVU_002G248800g [Phaseolus vulgaris]
           gi|561032989|gb|ESW31568.1| hypothetical protein
           PHAVU_002G248800g [Phaseolus vulgaris]
          Length = 641

 Score =  230 bits (586), Expect = 3e-58
 Identities = 112/209 (53%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDLI  G++ PD SLYN LL++CTQLGKL+EG++VH H LNS ++N +   N ++ M
Sbjct: 53  LHVLDLIQCGSLKPDRSLYNTLLKKCTQLGKLREGKLVHFHILNSEFKNDLVIQNSVLFM 112

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YA+CG  ++AR++FDEMP RDMV+WT++ITG++QN+ A  AL LF +MLR G  PN+FTL
Sbjct: 113 YARCGSLEDARRMFDEMPCRDMVTWTSMITGYAQNESANDALVLFPKMLREGARPNEFTL 172

Query: 268 GSVLKAAGAVGE-REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S++K  G +     GRQIH  C+  G   +V+VGS+LVDMYAR G + EA+ +FD L  
Sbjct: 173 SSLVKCCGFIASYGYGRQIHACCWKYGCYSNVFVGSSLVDMYARCGYLGEARSVFDELGC 232

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           K+EV WNALI+G+ARKG+  +A+ +F  M
Sbjct: 233 KNEVSWNALITGYARKGEGEEALAMFVRM 261



 Score =  110 bits (274), Expect = 4e-22
 Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P+    + L++ C  +     GR +HA        + +   + L+ MYA+CG   EAR V
Sbjct: 167 PNEFTLSSLVKCCGFIASYGYGRQIHACCWKYGCYSNVFVGSSLVDMYARCGYLGEARSV 226

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG-E 233
           FDE+  ++ VSW A+ITG+++  + E AL +F+ M R G+ P +FT  ++L +  ++G  
Sbjct: 227 FDELGCKNEVSWNALITGYARKGEGEEALAMFVRMQREGYRPTEFTYSALLCSCSSMGCL 286

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
            +G+ +H     +G     YVG+ L+ MY +SG + +A+ +F  L     V  N+++ G+
Sbjct: 287 EQGKWLHAHLMKSGRKLVGYVGNTLLHMYTKSGSIWDAEKVFGKLGKIDVVSCNSMLIGY 346

Query: 52  ARKGDAADAVGLFSEML 2
           A+ G   +AV  F EM+
Sbjct: 347 AQHGLGREAVQHFEEMI 363



 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P    Y+ LL  C+ +G L++G+ +HAH + S  +      N L+ MY K G   +A KV
Sbjct: 268 PTEFTYSALLCSCSSMGCLEQGKWLHAHLMKSGRKLVGYVGNTLLHMYTKSGSIWDAEKV 327

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG-AVGE 233
           F ++ + D+VS  +++ G++Q+     A++ F EM+R G  PN  T  SVL A   A   
Sbjct: 328 FGKLGKIDVVSCNSMLIGYAQHGLGREAVQHFEEMIRFGIVPNDITFLSVLTACSRARLL 387

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE-SKSEVPWNALI 62
            EG+   G+        +V   + +VD+  R+G +++AK   + +    +   W AL+
Sbjct: 388 DEGKHYFGLMRKYHIEPEVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTGAIWGALL 445



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 30/96 (31%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 PNQFTLGSVLKAAGAVGE-REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKML 110
           P++    ++LK    +G+ REG+ +H     + +  D+ + ++++ MYAR G +E+A+ +
Sbjct: 66  PDRSLYNTLLKKCTQLGKLREGKLVHFHILNSEFKNDLVIQNSVLFMYARCGSLEDARRM 125

Query: 109 FDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           FD +  +  V W ++I+G+A+   A DA+ LF +ML
Sbjct: 126 FDEMPCRDMVTWTSMITGYAQNESANDALVLFPKML 161


>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
          Length = 750

 Score =  228 bits (581), Expect = 1e-57
 Identities = 111/192 (57%), Positives = 148/192 (77%), Gaps = 1/192 (0%)
 Frame = -3

Query: 577 LYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEM 398
           LYN+LL+RCT++ KL+EG++VHAHFLNS +R+     N ++ MYAKCG   +ARK+FDEM
Sbjct: 78  LYNRLLKRCTEMRKLREGKMVHAHFLNSQFRDDPVIGNTILNMYAKCGSLADARKLFDEM 137

Query: 397 PQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG-AVGEREGR 221
           P +D+V+WTA+I+G+SQ+D+AE AL LF  MLR G  PNQFTL S+LKA+G     + GR
Sbjct: 138 PLKDIVTWTALISGYSQHDQAEEALALFPLMLRRGLEPNQFTLSSLLKASGDGTTNKRGR 197

Query: 220 QIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKG 41
           Q+H  C   GY  DVYVGS+LVDMYAR G + EA+++FD L +K+EV WNALI+GH+RKG
Sbjct: 198 QLHAYCLKCGYDSDVYVGSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNALIAGHSRKG 257

Query: 40  DAADAVGLFSEM 5
           +  +A+ LFS M
Sbjct: 258 ETENALRLFSMM 269



 Score =  137 bits (345), Expect = 3e-30
 Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 1/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L +  ++ +    P    ++ L   C   G L++G+ VHA  + S  R      N L+ M
Sbjct: 263 LRLFSMMHREDFKPTHFTFSSLCTACASTGSLEQGKWVHAQVIKSGGRLVAFVGNTLLDM 322

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAK G  ++A+KVFD + +RD+VSW +++ G+++  + E ALRLF  M R  F P  FT 
Sbjct: 323 YAKSGSIEDAKKVFDRLVKRDVVSWNSMLNGYARKGETENALRLFSMMHREDFKPTDFTY 382

Query: 268 GSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S+  A  + G  E G+ +H     +G     +VG+ L+DMYA+SG +E+AK +FD L  
Sbjct: 383 SSLCTACASTGSLEQGKWVHAHVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVK 442

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEML 2
           +  V WN+++ G+A+ G     V  F EM+
Sbjct: 443 RDVVSWNSMLRGYAQHGLGRKTVQHFEEMM 472



 Score =  133 bits (334), Expect = 5e-29
 Identities = 76/209 (36%), Positives = 119/209 (56%), Gaps = 1/209 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L +  L+ +  ++P+    + LL+        K GR +HA+ L   Y + +   + L+ M
Sbjct: 162 LALFPLMLRRGLEPNQFTLSSLLKASGDGTTNKRGRQLHAYCLKCGYDSDVYVGSSLVDM 221

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YA+ G   EAR +FD +  ++ VSW A+I G S+  + E ALRLF  M R  F P  FT 
Sbjct: 222 YARYGHLVEARLIFDGLVTKNEVSWNALIAGHSRKGETENALRLFSMMHREDFKPTHFTF 281

Query: 268 GSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S+  A  + G  E G+ +H     +G     +VG+ L+DMYA+SG +E+AK +FD L  
Sbjct: 282 SSLCTACASTGSLEQGKWVHAQVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVK 341

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEM 5
           +  V WN++++G+ARKG+  +A+ LFS M
Sbjct: 342 RDVVSWNSMLNGYARKGETENALRLFSMM 370



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L +  ++ +    P    Y+ L   C   G L++G+ VHAH + S  R      N L+ M
Sbjct: 364 LRLFSMMHREDFKPTDFTYSSLCTACASTGSLEQGKWVHAHVIKSGGRLVAFVGNTLLDM 423

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAK G  ++A+KVFD + +RD+VSW +++ G++Q+    + ++ F EM+ +G  P   T 
Sbjct: 424 YAKSGSIEDAKKVFDRLVKRDVVSWNSMLRGYAQHGLGRKTVQHFEEMMTSGIEPISVTF 483

Query: 268 GSVLKAAGAVG-EREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEA-KMLFDCLE 95
            SVL A    G   EGR    +        DV     +VD+  R+G +++A + + +   
Sbjct: 484 LSVLTACSHAGLLDEGRHYFELMKKYKVEPDVLHYVTMVDLLGRAGLLDQAERYIREMPI 543

Query: 94  SKSEVPWNALI 62
             S   W AL+
Sbjct: 544 EPSAAVWGALL 554



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 47/77 (61%)
 Frame = -3

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGH 53
           REG+ +H     + +  D  +G+ +++MYA+ G + +A+ LFD +  K  V W ALISG+
Sbjct: 93  REGKMVHAHFLNSQFRDDPVIGNTILNMYAKCGSLADARKLFDEMPLKDIVTWTALISGY 152

Query: 52  ARKGDAADAVGLFSEML 2
           ++   A +A+ LF  ML
Sbjct: 153 SQHDQAEEALALFPLML 169


>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 650

 Score =  227 bits (578), Expect = 2e-57
 Identities = 110/212 (51%), Positives = 152/212 (71%), Gaps = 3/212 (1%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L VLDL+++ +++ D +LY+KLL +C+Q G+LK+  IVHAH L S + N +   N L+  
Sbjct: 59  LHVLDLVNRASLEADRTLYSKLLNKCSQTGQLKQATIVHAHMLTSQFNNDLPILNTLLNT 118

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           Y KCG  D A  +FDEMP RD+V+WT++I+G+SQ D+   +L LF  MLR+G  PNQFTL
Sbjct: 119 YVKCGSLDHAHHLFDEMPHRDLVTWTSLISGYSQLDRPRESLVLFPHMLRHGLVPNQFTL 178

Query: 268 GSVLKAAGA---VGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCL 98
            S+LKAAGA     +R GRQ+H  CF  G+  +VYVG++LVDMYAR G M++++++FD L
Sbjct: 179 SSLLKAAGAGPDPDDRHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGLMDDSQIIFDAL 238

Query: 97  ESKSEVPWNALISGHARKGDAADAVGLFSEML 2
            +K+EV WNALI+GHARKG    A+ LF  ML
Sbjct: 239 RTKNEVSWNALIAGHARKGQGEHALRLFWNML 270



 Score =  134 bits (337), Expect = 2e-29
 Identities = 67/178 (37%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 KEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGF 353
           + GR +HA+     + + +     L+ MYA+CGL D+++ +FD +  ++ VSW A+I G 
Sbjct: 194 RHGRQLHAYCFKCGFDSNVYVGTSLVDMYARCGLMDDSQIIFDALRTKNEVSWNALIAGH 253

Query: 352 SQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDV 176
           ++  + E ALRLF  MLR GF P  FT  SV     + G  E G+ +H     +G     
Sbjct: 254 ARKGQGEHALRLFWNMLRGGFKPTHFTYSSVFTVCASAGSMEQGKWVHSHMIKSGVNLVA 313

Query: 175 YVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           +VG+ L+DMYA+SG +E+A+ +FD L  +  V WN++++G+A+ G   + V LF EML
Sbjct: 314 FVGNTLLDMYAKSGSIEDARKVFDRLVKRDVVSWNSMLTGYAQHGLGTETVQLFEEML 371



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
 Frame = -3

Query: 604 KGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPD 425
           +G   P    Y+ +   C   G +++G+ VH+H + S         N L+ MYAK G  +
Sbjct: 271 RGGFKPTHFTYSSVFTVCASAGSMEQGKWVHSHMIKSGVNLVAFVGNTLLDMYAKSGSIE 330

Query: 424 EARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAG 245
           +ARKVFD + +RD+VSW +++TG++Q+      ++LF EMLR G  PN  +   VL A  
Sbjct: 331 DARKVFDRLVKRDVVSWNSMLTGYAQHGLGTETVQLFEEMLRIGVQPNDISFLCVLTACS 390

Query: 244 AVGEREGRQIHGVCFMTGYC--GDVYVGSALVDMYARSGQMEEA-KMLFDCLESKSEVPW 74
                +  Q +       +     V+    +VD+  R+G ++ A K + +     +   W
Sbjct: 391 HSHLLDEGQYYFHLMRKKFKIEPQVFHYVTMVDLLGRAGLLDRADKFIREMPTEPTAAVW 450

Query: 73  NALI 62
            AL+
Sbjct: 451 GALL 454


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  216 bits (551), Expect = 3e-54
 Identities = 105/210 (50%), Positives = 152/210 (72%), Gaps = 1/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L+VLDLI+ G+++P+ +LY+K+L +CT L KLK+GR +HAH  +S + + +   N ++ M
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  +EA+ +FD+MP +DMVSWT +I+G+SQ+ +A  AL LF +ML  GF PN+FTL
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 268 GSVLKAAG-AVGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S+LKA+G    +  GRQ+H      GY  +V+VGS+L+DMYAR   M EAK++F+ L +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEML 2
           K+ V WNALI+GHARKG+    + LF +ML
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFXQML 299



 Score =  126 bits (316), Expect = 6e-27
 Identities = 65/175 (37%), Positives = 104/175 (59%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           GR +HA  L   Y   +   + L+ MYA+     EA+ +F+ +  +++VSW A+I G ++
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGEREGRQIHGVCFMTGYCGDVYVG 167
             + E  +RLF +MLR GF P  FT  SVL  A +    +G+ +H     +G     Y+G
Sbjct: 285 KGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIG 344

Query: 166 SALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           + L+DMYA+SG +++AK +F  L  +  V WN++ISG+A+ G  A+A+ LF +ML
Sbjct: 345 NTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
 Frame = -3

Query: 592 DPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARK 413
           +P    Y+ +L  C   G L++G+ VHAH + S  +      N LI MYAK G   +A+K
Sbjct: 304 EPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 362

Query: 412 VFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG- 236
           VF  + ++D+VSW ++I+G++Q+     AL+LF +ML+    PN+ T  SVL A    G 
Sbjct: 363 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGL 422

Query: 235 EREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESK-SEVPWNALI 62
             EG+    +         V     +VD+  R+G++ EA    + +  K +   W AL+
Sbjct: 423 LDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 481


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  216 bits (550), Expect = 4e-54
 Identities = 105/210 (50%), Positives = 152/210 (72%), Gaps = 1/210 (0%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVM 449
           L+VLDLI+ G+++P+ +LY+K+L +CT L KLK+GR +HAH  +S + + +   N ++ M
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 448 YAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTL 269
           YAKCG  +EA+ +FD+MP +DMVSWT +I+G+SQ+ +A  AL LF +ML  GF PN+FTL
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 268 GSVLKAAG-AVGEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLES 92
            S+LKA+G    +  GRQ+H      GY  +V+VGS+L+DMYAR   M EAK++F+ L +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269

Query: 91  KSEVPWNALISGHARKGDAADAVGLFSEML 2
           K+ V WNALI+GHARKG+    + LF +ML
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQML 299



 Score =  126 bits (316), Expect = 6e-27
 Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 1/176 (0%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           GR +HA  L   Y   +   + L+ MYA+     EA+ +F+ +  +++VSW A+I G ++
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYV 170
             + E  +RLFL+MLR GF P  FT  SV  A  + G  E G+ +H     +G     Y+
Sbjct: 285 KGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYI 344

Query: 169 GSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEML 2
           G+ L+DMYA+SG +++AK +F  L  +  V WN++ISG+A+ G  A+A+ LF +ML
Sbjct: 345 GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400



 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
 Frame = -3

Query: 619 LDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAK 440
           L ++ +G  +P    Y+ +   C   G L++G+ VHAH + S  +      N LI MYAK
Sbjct: 296 LQMLRQG-FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 354

Query: 439 CGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSV 260
            G   +A+KVF  + ++D+VSW ++I+G++Q+     AL+LF +ML+    PN+ T  SV
Sbjct: 355 SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSV 414

Query: 259 LKAAGAVG-EREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESK-S 86
           L A    G   EG+    +         V     +VD+  R+G++ EA    + +  K +
Sbjct: 415 LTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 474

Query: 85  EVPWNALI 62
              W AL+
Sbjct: 475 AAVWGALL 482


>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 262

 Score =  215 bits (547), Expect = 1e-53
 Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 2/191 (1%)
 Frame = -3

Query: 628 LFVLDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYR-NYITTHNMLIV 452
           L+ LDLI +G++ PD +LY+KLL+ CT+LGK+++GRIVHAH ++S +  N++   N+++ 
Sbjct: 72  LYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVN 131

Query: 451 MYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFT 272
           MYAKCG  D+AR++FDEMP +DMV+WTA+I GFSQN++   AL LF +MLR G  PN FT
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFT 191

Query: 271 LGSVLKAAGAV-GEREGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLE 95
           L S+LKA+G+  G   G Q+H  C   GY   VYVGSALVDMYAR G M+ A++ FD + 
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251

Query: 94  SKSEVPWNALI 62
           +KSEV WNALI
Sbjct: 252 TKSEVSWNALI 262


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331463|gb|EFH61882.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  207 bits (528), Expect = 2e-51
 Identities = 104/198 (52%), Positives = 142/198 (71%), Gaps = 3/198 (1%)
 Frame = -3

Query: 586 DASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVF 407
           D   YN LL++CT    L +GRIVH H + SI+R+ +  +N L+ MYAKCG  +EARKVF
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 406 DEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE 227
           D+MP+RD V+WT +I+G+SQ+D+   AL LF +MLR GF PN+FTL SV+KAA A  ER 
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA--ERR 167

Query: 226 ---GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISG 56
              G Q+HG C   G+  +V+VGSAL+D+Y R G M++A+++FD LES+++V WNALI+G
Sbjct: 168 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 227

Query: 55  HARKGDAADAVGLFSEML 2
           HAR+     A+ LF  ML
Sbjct: 228 HARRCGTEKALELFQGML 245



 Score =  112 bits (280), Expect = 9e-23
 Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           G  +H   +   + + +   + L+ +Y + GL D+A+ VFD +  R+ VSW A+I G ++
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYV 170
               E+AL LF  MLR GF P+ F+  S+  A  + G  E G+ +H     +G     + 
Sbjct: 231 RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 290

Query: 169 GSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEM 5
           G+ L+DMYA+SG + +A+ +FD L  +  V WN+L++ +A+ G   +AV  F EM
Sbjct: 291 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEM 345



 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P    Y  L   C+  G L++G+ VHA+ + S  +      N L+ MYAK G   +ARK+
Sbjct: 251 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 310

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG-E 233
           FD + +RD+VSW +++T ++Q+     A+  F EM R G  PN+ +  SVL A    G  
Sbjct: 311 FDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLL 370

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEA-KMLFDCLESKSEVPWNALIS 59
            EG   + +    G   + +    +VD+  R+G +  A + + +     +   W AL++
Sbjct: 371 DEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 429


>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222854713|gb|EEE92260.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 590

 Score =  207 bits (528), Expect = 2e-51
 Identities = 106/191 (55%), Positives = 137/191 (71%), Gaps = 3/191 (1%)
 Frame = -3

Query: 565 LLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRD 386
           LL+RCT L KL EG+I+HA  LNS +R+ +   N L+ +YAKCG    ARK+FDEM  RD
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 385 MVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGER---EGRQI 215
           +V+WTA+ITG+SQ+D+ + AL L  EMLR G  PNQFTL S+LKAA  VG     +GRQ+
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 214 HGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDA 35
           HG+C   GY  +VYV  A++DMYAR   +EEA+++FD + SK+EV WNALI+G+ARKG  
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 34  ADAVGLFSEML 2
             A  LFS ML
Sbjct: 201 DKAFCLFSNML 211



 Score =  119 bits (297), Expect = 9e-25
 Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
 Frame = -3

Query: 595 MDPDASLYNKLLRRCTQLGK--LKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDE 422
           + P+      LL+  + +G   + +GR +H   L   Y + +     ++ MYA+C   +E
Sbjct: 112 LKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEE 171

Query: 421 ARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGA 242
           A+ +FD M  ++ VSW A+I G+++  + ++A  LF  MLR    P  FT  SVL A  +
Sbjct: 172 AQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACAS 231

Query: 241 VGERE-GRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSEVPWNAL 65
           +G  E G+ +H +    G     +VG+ L+DMYA+SG +E+AK +FD L  +  V WN++
Sbjct: 232 MGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSM 291

Query: 64  ISGHARKGDAADAVGLFSEML 2
           ++G+++ G    A+  F EML
Sbjct: 292 LTGYSQHGLGKVALQRFEEML 312



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P    Y+ +L  C  +G L++G+ VHA  +    +      N L+ MYAK G  ++A+KV
Sbjct: 217 PTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKV 276

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG-E 233
           FD + +RD+VSW +++TG+SQ+   + AL+ F EMLR    PN  T   VL A    G  
Sbjct: 277 FDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLL 336

Query: 232 REGRQIHGVCFMTGYCGDVYVGS--ALVDMYARSGQMEEAKMLFDCLESK-SEVPWNALI 62
            EGR  H    M  Y  +  +     +VD+  R+G ++ A      +  K +   W AL+
Sbjct: 337 DEGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394


>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
           gi|482565379|gb|EOA29568.1| hypothetical protein
           CARUB_v10016279mg [Capsella rubella]
          Length = 717

 Score =  207 bits (527), Expect = 2e-51
 Identities = 101/207 (48%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
 Frame = -3

Query: 619 LDLIDKGAMDPDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAK 440
           ++ ID   +  D   YN LL++CT    + +GRIVHAH + SI+R+ +  +N L+ MYAK
Sbjct: 57  INYIDGSYIPADRRFYNMLLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNMYAK 116

Query: 439 CGLPDEARKVFDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSV 260
           CG  +EARKVFD+MP RD V+WT +I+G+SQ+ ++  AL LF +M+  GF PN+FTL SV
Sbjct: 117 CGSLEEARKVFDQMPHRDFVTWTTLISGYSQHGRSRDALLLFNQMVGFGFSPNEFTLSSV 176

Query: 259 LKAAGAVGER-EGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEAKMLFDCLESKSE 83
           +KAA A      G Q+HG C   G+  +V+VGSAL+D+Y R G M++A+++FD LES+++
Sbjct: 177 IKAAAAETRGCIGHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 236

Query: 82  VPWNALISGHARKGDAADAVGLFSEML 2
           V WNALI+GHAR+     A+ LF  ML
Sbjct: 237 VSWNALIAGHARRCGTEKALELFQHML 263



 Score =  114 bits (286), Expect = 2e-23
 Identities = 60/175 (34%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
 Frame = -3

Query: 526 GRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKVFDEMPQRDMVSWTAVITGFSQ 347
           G  +H   +   + + +   + L+ +Y + GL D+A+ VFD +  R+ VSW A+I G ++
Sbjct: 189 GHQLHGFCIKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 248

Query: 346 NDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVGERE-GRQIHGVCFMTGYCGDVYV 170
               E+AL LF  MLR+GF P+ F+  S+  A  + G  E G+ +H     +G     + 
Sbjct: 249 RCGTEKALELFQHMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 308

Query: 169 GSALVDMYARSGQMEEAKMLFDCLESKSEVPWNALISGHARKGDAADAVGLFSEM 5
           G+ L+DMYA+SG +++A+ +FD L  +  V WN+L++ +A+ G   +AV  F EM
Sbjct: 309 GNTLLDMYAKSGSIDDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEM 363



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
 Frame = -3

Query: 589 PDASLYNKLLRRCTQLGKLKEGRIVHAHFLNSIYRNYITTHNMLIVMYAKCGLPDEARKV 410
           P    Y  L   C+  G L++G+ VHA+ + S  +      N L+ MYAK G  D+ARK+
Sbjct: 269 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIDDARKI 328

Query: 409 FDEMPQRDMVSWTAVITGFSQNDKAERALRLFLEMLRNGFFPNQFTLGSVLKAAGAVG-E 233
           FD + +RD+VSW +++T ++Q+     A+  F EM R G  PN+ +  SVL A    G  
Sbjct: 329 FDRLAKRDVVSWNSLLTAYAQHGFGNEAVYWFEEMRRGGIRPNEISFLSVLTACSHSGLL 388

Query: 232 REGRQIHGVCFMTGYCGDVYVGSALVDMYARSGQMEEA-KMLFDCLESKSEVPWNALIS 59
            EG Q   +    G   + +    +VD+  R+G +  A + + +     +   W AL++
Sbjct: 389 DEGWQYFELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 447