BLASTX nr result

ID: Catharanthus23_contig00039298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039298
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Rici...   129   5e-28
ref|XP_006368027.1| PREDICTED: putative RING-H2 finger protein A...   126   3e-27
gb|EMJ21189.1| hypothetical protein PRUPE_ppb022242mg [Prunus pe...   124   1e-26
gb|EOX95717.1| RING/U-box superfamily protein, putative [Theobro...   123   3e-26
ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A...   122   4e-26
ref|XP_006444855.1| hypothetical protein CICLE_v10020705mg [Citr...   120   1e-25
ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein A...   120   2e-25
ref|XP_002302627.2| zinc finger family protein [Populus trichoca...   118   9e-25
ref|XP_004306676.1| PREDICTED: putative RING-H2 finger protein A...   118   9e-25
gb|AFK44003.1| unknown [Medicago truncatula]                          117   1e-24
ref|XP_003638664.1| RING finger protein [Medicago truncatula] gi...   117   1e-24
ref|XP_002320862.2| hypothetical protein POPTR_0014s09380g [Popu...   114   1e-23
gb|EXB62190.1| Putative RING-H2 finger protein ATL21A [Morus not...   112   4e-23
ref|XP_006339703.1| PREDICTED: putative RING-H2 finger protein A...   112   5e-23
ref|XP_006339800.1| PREDICTED: putative RING-H2 finger protein A...   110   3e-22
ref|XP_004510676.1| PREDICTED: putative RING-H2 finger protein A...   109   3e-22
ref|XP_003529891.1| PREDICTED: putative RING-H2 finger protein A...   108   1e-21
ref|XP_006604906.1| PREDICTED: RING-H2 finger protein ATL22-like...   107   2e-21
gb|ESW07247.1| hypothetical protein PHAVU_010G113700g [Phaseolus...   106   4e-21
ref|XP_004231220.1| PREDICTED: putative RING-H2 finger protein A...   105   5e-21

>ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
           gi|223537443|gb|EEF39071.1| RING-H2 finger protein
           ATL3K, putative [Ricinus communis]
          Length = 374

 Score =  129 bits (323), Expect = 5e-28
 Identities = 66/107 (61%), Positives = 78/107 (72%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q QQ+C YP GFNL+C NQ K +L LP+SGDF VR INYLTQ+IQLYDP NC+P R+   
Sbjct: 44  QSQQQCGYP-GFNLSCNNQRKTVLKLPYSGDFLVRGINYLTQQIQLYDPDNCIPKRL--L 100

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPF+A+  +NYTFL C S+ V S FT I+CLSNST SVLAT
Sbjct: 101 SFNLSGSPFLAAAHQNYTFLSCPSQLVESRFTTINCLSNSTTSVLAT 147


>ref|XP_006368027.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Solanum
           tuberosum]
          Length = 374

 Score =  126 bits (317), Expect = 3e-27
 Identities = 67/107 (62%), Positives = 74/107 (69%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  Q C YP GFNL C NQGK  LNLP +GDF+VRDINYLTQEIQLYDP NCLP R+   
Sbjct: 46  QNLQHCTYP-GFNLKCNNQGKGNLNLPGAGDFYVRDINYLTQEIQLYDPSNCLPKRLIDF 104

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                      SY  NYTFL CS++ VRS F+ IDC+SNSTIS LAT
Sbjct: 105 QMPSLSVFKSVSY-RNYTFLTCSTDLVRSRFSVIDCMSNSTISTLAT 150


>gb|EMJ21189.1| hypothetical protein PRUPE_ppb022242mg [Prunus persica]
          Length = 375

 Score =  124 bits (311), Expect = 1e-26
 Identities = 62/104 (59%), Positives = 74/104 (71%)
 Frame = -3

Query: 314 QKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXX 135
           + C YP GFNL C +QG  ++ LP SG+FFVR I+Y TQEIQLYDP NCLP ++      
Sbjct: 47  ENCGYP-GFNLTCNSQGLTVIKLPLSGEFFVRAISYATQEIQLYDPNNCLPQKL--LSLS 103

Query: 134 XXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
              SPFVA+  +NYTFL C + F +S FTPIDCLSNST SVLAT
Sbjct: 104 LAGSPFVAAVYQNYTFLSCPASFTKSRFTPIDCLSNSTTSVLAT 147


>gb|EOX95717.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 372

 Score =  123 bits (308), Expect = 3e-26
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           QP+  C YP GFNL C +Q  ++LNLP+SG+FFVRDIN+L Q+I LYDP NCLP R+   
Sbjct: 42  QPEY-CGYP-GFNLGCKSQSTIVLNLPYSGEFFVRDINFLNQQIYLYDPDNCLPKRL--L 97

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPFVA + +NYTFL C ++  +S FT IDCLSNST SVLAT
Sbjct: 98  SFNLSGSPFVAPFHQNYTFLNCPTQITKSRFTTIDCLSNSTNSVLAT 144


>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297745433|emb|CBI40513.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  122 bits (307), Expect = 4e-26
 Identities = 65/107 (60%), Positives = 73/107 (68%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  Q C YP GFNL+C + G  +L LP+ G+FFVR INY+TQEIQLYDP NCLP R+   
Sbjct: 44  QQHQNCGYP-GFNLSCGSPGITVLRLPYWGEFFVRGINYITQEIQLYDPDNCLPKRL--L 100

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPF+A Y  NYTFL C SE  R  FT IDCLSNST SVLAT
Sbjct: 101 AFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLSNSTSSVLAT 147


>ref|XP_006444855.1| hypothetical protein CICLE_v10020705mg [Citrus clementina]
           gi|568876401|ref|XP_006491268.1| PREDICTED: putative
           RING-H2 finger protein ATL21A-like [Citrus sinensis]
           gi|557547117|gb|ESR58095.1| hypothetical protein
           CICLE_v10020705mg [Citrus clementina]
          Length = 369

 Score =  120 bits (302), Expect = 1e-25
 Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 QKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXX 135
           + C YP GFNL CT+QG  +L LP SG+FFVR+INY+TQ+I LYDP++CLP R+      
Sbjct: 45  ENCSYP-GFNLTCTSQGITVLKLPNSGEFFVRNINYITQQIYLYDPEDCLPKRL--QSFN 101

Query: 134 XXXSPFVASYV-ENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
              SPFVA++V  NYTFL C ++ ++S FT IDCLSNST SVLAT
Sbjct: 102 LSGSPFVATFVSHNYTFLSCPAQVIKSRFTTIDCLSNSTTSVLAT 146


>ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Vitis
           vinifera]
          Length = 334

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/107 (59%), Positives = 72/107 (67%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  Q C YP GFNL+C +    +L LP+ G+FFVR INY+TQEIQLYDP NCLP R+   
Sbjct: 44  QQHQNCGYP-GFNLSCGSPDITVLRLPYWGEFFVRGINYITQEIQLYDPDNCLPKRL--L 100

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPF+A Y  NYTFL C SE  R  FT IDCLSNST SVLAT
Sbjct: 101 AFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLSNSTSSVLAT 147


>ref|XP_002302627.2| zinc finger family protein [Populus trichocarpa]
           gi|550345196|gb|EEE81900.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 378

 Score =  118 bits (295), Expect = 9e-25
 Identities = 61/107 (57%), Positives = 74/107 (69%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  + C YP GF+L+C NQ   +L LP SGDF VRDINYLTQ+IQLYD  NCL  R+   
Sbjct: 48  QQPRNCGYP-GFDLSCNNQSSTVLKLPHSGDFLVRDINYLTQQIQLYDSDNCLAKRL--L 104

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPF+  + +NYTFL C ++ V+S FT I+CLSNSTISVLAT
Sbjct: 105 QLNLSGSPFLGFFHQNYTFLSCPTQLVKSRFTTINCLSNSTISVLAT 151


>ref|XP_004306676.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Fragaria
           vesca subsp. vesca]
          Length = 372

 Score =  118 bits (295), Expect = 9e-25
 Identities = 58/104 (55%), Positives = 74/104 (71%)
 Frame = -3

Query: 314 QKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXX 135
           + C YP GF+L C  QG  +++LP SG+FFVR I+Y+TQEI+LY+P  CLP R+      
Sbjct: 49  KNCSYP-GFDLTCNTQGTTVISLPNSGEFFVRAIDYVTQEIKLYEPSGCLPRRL--LTLD 105

Query: 134 XXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
              SPFVAS+ +NYTFL C + F +S F PIDCLSNST SV+AT
Sbjct: 106 LKGSPFVASFYQNYTFLSCPASFTKSKFAPIDCLSNSTTSVMAT 149


>gb|AFK44003.1| unknown [Medicago truncatula]
          Length = 371

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/101 (58%), Positives = 72/101 (71%)
 Frame = -3

Query: 308 CFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXX 129
           C YP GFNL+CTN  K +L LP+S +F+VR INYLTQ+IQLYDP +CLP R+        
Sbjct: 46  CVYP-GFNLSCTNDSKTILKLPYSEEFYVRSINYLTQQIQLYDPDDCLPKRL--LRLNFS 102

Query: 128 XSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
            SPF+AS+  +YTFL CSS+ + S F PIDCLSNST  V A
Sbjct: 103 NSPFIASFSRDYTFLGCSSQNIGSQFIPIDCLSNSTYFVSA 143


>ref|XP_003638664.1| RING finger protein [Medicago truncatula]
           gi|355504599|gb|AES85802.1| RING finger protein
           [Medicago truncatula]
          Length = 371

 Score =  117 bits (294), Expect = 1e-24
 Identities = 59/101 (58%), Positives = 72/101 (71%)
 Frame = -3

Query: 308 CFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXX 129
           C YP GFNL+CTN  K +L LP+S +F+VR INYLTQ+IQLYDP +CLP R+        
Sbjct: 46  CVYP-GFNLSCTNDSKTILKLPYSEEFYVRSINYLTQQIQLYDPDDCLPKRL--LRLNFS 102

Query: 128 XSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
            SPF+AS+  +YTFL CSS+ + S F PIDCLSNST  V A
Sbjct: 103 NSPFIASFSRDYTFLGCSSQNIGSQFIPIDCLSNSTYFVSA 143


>ref|XP_002320862.2| hypothetical protein POPTR_0014s09380g [Populus trichocarpa]
           gi|550323828|gb|EEE99177.2| hypothetical protein
           POPTR_0014s09380g [Populus trichocarpa]
          Length = 344

 Score =  114 bits (285), Expect = 1e-23
 Identities = 60/104 (57%), Positives = 72/104 (69%)
 Frame = -3

Query: 314 QKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXX 135
           + C YP GF+L+C N+   +L LP SGDF VRDI+Y TQ+IQLYD  NCLP R+      
Sbjct: 31  RNCGYP-GFDLSCNNRRTTVLKLPHSGDFLVRDIDYRTQQIQLYDKDNCLPKRL--LQLN 87

Query: 134 XXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
              SPF A + +NYTFL C ++FV S F  IDCLSNSTISVLAT
Sbjct: 88  LSGSPFAAVFHQNYTFLSCPTQFVMSRFPIIDCLSNSTISVLAT 131


>gb|EXB62190.1| Putative RING-H2 finger protein ATL21A [Morus notabilis]
          Length = 376

 Score =  112 bits (281), Expect = 4e-23
 Identities = 58/107 (54%), Positives = 72/107 (67%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  Q C YP GF+L C +Q   +L LPFSG+FFVR I+Y+TQEI LYDP  CLP R+   
Sbjct: 45  QNLQNCGYP-GFDLTCNSQNLTVLKLPFSGEFFVRQISYITQEILLYDPFKCLPRRL--L 101

Query: 143 XXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                 SPFV+++ +N+TFL C S   +S +T IDCLSNST S LAT
Sbjct: 102 SFNLSGSPFVSAFYQNFTFLMCPSSLTKSRYTSIDCLSNSTHSALAT 148


>ref|XP_006339703.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Solanum
           tuberosum]
          Length = 372

 Score =  112 bits (280), Expect = 5e-23
 Identities = 59/108 (54%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRI-XX 147
           Q  Q C YP GF+L C+NQG+ +L+LP +GD++VRDI+YLTQEIQLYDP +CLP R+   
Sbjct: 45  QNLQNCSYP-GFSLRCSNQGRSILSLPGAGDYYVRDIDYLTQEIQLYDPSDCLPKRLMNF 103

Query: 146 XXXXXXXSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                  SPF A    NYTFL CS+  V +    I CLSNST S LAT
Sbjct: 104 STSFSSSSPFKAVAYRNYTFLTCSTNLVLNRLNVISCLSNSTTSTLAT 151


>ref|XP_006339800.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Solanum
           tuberosum]
          Length = 345

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = -3

Query: 314 QKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXX 135
           Q C Y  GFNL C NQGK ++NLP +GDF+VRDINYLTQ+IQLYDP +CLP R+      
Sbjct: 48  QHCTYNPGFNLKCNNQGKAIINLPGAGDFYVRDINYLTQQIQLYDPYDCLPKRLTKFQLP 107

Query: 134 XXXSPFVASYVENYTFLRCSSEFVRSGFTP--IDCLSNSTISVLAT 3
                F   Y  +YTFL CS++ ++S  +   I C+SNST S +AT
Sbjct: 108 SSSV-FKPVYYRDYTFLTCSTDLIKSYHSVHIIGCMSNSTSSTVAT 152


>ref|XP_004510676.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cicer
           arietinum]
          Length = 374

 Score =  109 bits (273), Expect = 3e-22
 Identities = 56/101 (55%), Positives = 69/101 (68%)
 Frame = -3

Query: 308 CFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXX 129
           C YP GFNL CTN  K +L LP+S  F+VR INYLTQ++ +YDP +CLP R+        
Sbjct: 46  CGYP-GFNLICTNSSKTVLKLPYSEKFYVRSINYLTQQLLVYDPDDCLPKRL--LSLNFS 102

Query: 128 XSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
            SPF A++  +YTFLRCSS+ + S F PIDCLSNST  V A
Sbjct: 103 NSPFTATFSRDYTFLRCSSQNIGSQFIPIDCLSNSTYFVSA 143


>ref|XP_003529891.1| PREDICTED: putative RING-H2 finger protein ATL21A-like isoform X1
           [Glycine max]
          Length = 372

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/101 (54%), Positives = 67/101 (66%)
 Frame = -3

Query: 308 CFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXX 129
           C YP GFNL CTN  K +L LP+SG F+VR INYLTQ+IQ+YDP +CLP R+        
Sbjct: 51  CGYP-GFNLTCTNNSKTVLKLPYSGAFYVRSINYLTQKIQVYDPDDCLPKRL--LTLNVS 107

Query: 128 XSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
            SPF+ ++  +YTFL C  +   S F PIDCLSNST  V A
Sbjct: 108 GSPFIPTFTRDYTFLSCPFQNAGSQFIPIDCLSNSTNFVSA 148


>ref|XP_006604906.1| PREDICTED: RING-H2 finger protein ATL22-like [Glycine max]
          Length = 378

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/99 (55%), Positives = 66/99 (66%)
 Frame = -3

Query: 302 YPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXXXS 123
           YP GF L CTN  K ++ LP++G F VR+INYL Q+IQ+YDP NCLP R+         S
Sbjct: 53  YP-GFKLTCTNDSKTVIKLPYTGKFIVRNINYLRQQIQVYDPDNCLPKRL--LSLNLSGS 109

Query: 122 PFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
           PFVA+ + NYTFLRC +    S F PIDCLSNST  V A
Sbjct: 110 PFVAASLRNYTFLRCPTRNAGSQFIPIDCLSNSTSFVSA 148


>gb|ESW07247.1| hypothetical protein PHAVU_010G113700g [Phaseolus vulgaris]
          Length = 374

 Score =  106 bits (264), Expect = 4e-21
 Identities = 56/101 (55%), Positives = 67/101 (66%)
 Frame = -3

Query: 308 CFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXXXXXXX 129
           C YP GFNL CTN  K +L LP+SG F+VR+INYLTQ+IQ+YDP +CLP R+        
Sbjct: 48  CGYP-GFNLICTNNSKTVLKLPYSGLFYVRNINYLTQKIQVYDPDDCLPKRL--LSLNVS 104

Query: 128 XSPFVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLA 6
            SPF  ++  NYTFL C  +   S F PIDCLSNST  V A
Sbjct: 105 ASPFSPTFTRNYTFLSCPLKNAGSQFIPIDCLSNSTHFVSA 145


>ref|XP_004231220.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Solanum
           lycopersicum]
          Length = 372

 Score =  105 bits (263), Expect = 5e-21
 Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = -3

Query: 323 QPQQKCFYPAGFNLNCTNQGKLLLNLPFSGDFFVRDINYLTQEIQLYDPQNCLPNRIXXX 144
           Q  Q C YP GF+L C+NQG+ +L+LP +GD++VRDI+Y TQEIQLYDP +CLP R+   
Sbjct: 45  QNLQNCSYP-GFSLICSNQGRSILSLPGAGDYYVRDIDYQTQEIQLYDPSDCLPKRLMNF 103

Query: 143 XXXXXXSP-FVASYVENYTFLRCSSEFVRSGFTPIDCLSNSTISVLAT 3
                    F A    NYTFL CS+  V S    I CLSNST S LAT
Sbjct: 104 STSFSPPSLFKAVAYRNYTFLTCSTNSVLSRSNAISCLSNSTTSTLAT 151


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