BLASTX nr result

ID: Catharanthus23_contig00039246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039246
         (375 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355632.1| PREDICTED: F-box protein At3g07870-like [Sol...    73   3e-11
ref|XP_006348773.1| PREDICTED: F-box protein At3g07870-like [Sol...    59   7e-07
gb|EMJ22481.1| hypothetical protein PRUPE_ppa007073mg [Prunus pe...    57   3e-06
ref|XP_006348769.1| PREDICTED: uncharacterized protein LOC102593...    56   4e-06
ref|XP_006447718.1| hypothetical protein CICLE_v10015458mg [Citr...    55   7e-06

>ref|XP_006355632.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum]
          Length = 401

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
 Frame = -1

Query: 342 ECKKARKEASRSILDVPDCVLGDIFTRLPIATILNCKRVCKSLYFTL-SDPEFSKAYHKK 166
           +C+++R      I+D+   ++ DI +RLPI +I  CK VCK  Y  L SDP F K Y+K+
Sbjct: 15  DCEESRISHVTGIMDLHIVIMVDILSRLPIKSIFYCKIVCKLWYHLLTSDPLFCKMYYKR 74

Query: 165 PP-FTSIVISLGNSAFCLLELNADNSYTIKRN---SPQIFRNPPGFSKGSVRLLGSCNG 1
              F SI++S+ +S   L+EL  D S+ + R    SP+ F  PP     ++ L+ SCNG
Sbjct: 75  SSYFPSILLSINHSVRLLVELKDDVSHPLNRTIVLSPR-FHLPPTLYTQNLTLISSCNG 132


>ref|XP_006348773.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum]
          Length = 371

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 43/108 (39%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
 Frame = -1

Query: 303 LDVPDCVLGDIFTRLPIATILNCKRVCKSLYFTL-SDPEFSKAYHKKP-PFTSIVISLGN 130
           +D+P  ++ DI +RLPI +I  CK VCK  Y  L  DP F   Y K+   F  I++S G 
Sbjct: 1   MDLPLVIMIDILSRLPIKSIFRCKCVCKVWYNILYPDPLFVLMYEKRSLKFPCILLSEGI 60

Query: 129 SAFCLLELNADNSYTIKRNSPQI-----FRNPPGFSKGSVRLLGSCNG 1
               LLEL     Y   R+   I     F  PP    G V L+GSCNG
Sbjct: 61  GEHSLLELKEGYRYYYGRSKRPIPLIPKFHYPP----GRVSLVGSCNG 104


>gb|EMJ22481.1| hypothetical protein PRUPE_ppa007073mg [Prunus persica]
          Length = 383

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
 Frame = -1

Query: 360 MEMTVPECKKARKEASRSILDVPDCVLGDIFTRLPIATILNCKRVCKSLYFTLSDPEFSK 181
           ME T  E  K   +    IL +PD +   IF ++PI T++ C+ VCKS   +LSDP F+K
Sbjct: 7   MEKTNTE--KEEHDNKPYILQLPDHITVHIFCKVPIKTLIQCQCVCKSWRHSLSDPHFTK 64

Query: 180 AYHKKPPFTSIVISLG-------NSAFCLLELN---ADNSYTIKRNSPQIFRNPPGFSKG 31
               + P + +   L        +  + L++LN   + N +T+K          P     
Sbjct: 65  DLFSRTPPSFLFHGLSGGPINPKSEGYLLVDLNKISSPNDFTLK------LYKDPNVRNL 118

Query: 30  SVRLLGSCNG 1
            V +LGSCNG
Sbjct: 119 RVGVLGSCNG 128


>ref|XP_006348769.1| PREDICTED: uncharacterized protein LOC102593140 [Solanum tuberosum]
          Length = 405

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
 Frame = -1

Query: 357 EMTVPECKKARKEASR-SILDVPDCVLGDIFTRLPIATILNCKRVCKSLYFTL-SDPEFS 184
           E    +C   RK A   +I+D    ++ +I +RL I  I  CK VCK  Y  L SDP F 
Sbjct: 27  EYVYVKCDCKRKRAYEVTIMDFSREIMVEILSRLTIKPIFRCKTVCKCWYNLLTSDPLFV 86

Query: 183 KAYHKKP-PFTSIVISLGNSAFCLLELNADNSYTIKRNSPQIFRNPP------------G 43
           K Y  +   F  I++S  +S   +LEL AD  Y  +  +  +   P              
Sbjct: 87  KMYQTRSCNFPCILLSNDDSIASVLELKADYDYYSRPRNRPVMLTPEFHIPKHKDRFGYS 146

Query: 42  FSKGSVRLLGSCNG 1
           F +  + L+GSCNG
Sbjct: 147 FDRKKLTLIGSCNG 160


>ref|XP_006447718.1| hypothetical protein CICLE_v10015458mg [Citrus clementina]
           gi|568830515|ref|XP_006469543.1| PREDICTED: F-box
           protein At3g07870-like [Citrus sinensis]
           gi|557550329|gb|ESR60958.1| hypothetical protein
           CICLE_v10015458mg [Citrus clementina]
          Length = 405

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
 Frame = -1

Query: 363 KMEMTVPECKKARKEASR------------SILDVPDCVLGDIFTRLPIATILNCKRVCK 220
           KM+  +   K   KEA++            S+ D+P  +L DIF+RLPI TIL  K VCK
Sbjct: 8   KMKSCITRSKFQAKEAAKEEDGVLATNYNVSMEDLPLPILVDIFSRLPIKTILQIKCVCK 67

Query: 219 SLYFTLSDPEFSKAYHKKPPFTSIVISLGNSAFCLLELNADNSYTIKRNSPQIFRNPPGF 40
           S +   SDP F+K +  + PF+ +++      FC         YT   +   +F    G 
Sbjct: 68  SWHSLCSDPYFAKIHLARAPFSIMIL----EKFC------KRIYT--NSLVPLFTLNQG- 114

Query: 39  SKGSVRLLGSCNG 1
            K  + LL SCNG
Sbjct: 115 DKERLSLLSSCNG 127


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